RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 CHAMP1Q96JM3 812 aa13.83□□□□□ -0.2
DEPDC7-203ENST00000427755 USP25Q9UHP3 1055 aa13.83□□□□□ -0.2
DEPDC7-203ENST00000427755 TRAF3IP3Q9Y228 551 aa13.83□□□□□ -0.2
DEPDC7-203ENST00000427755 GREB1Q4ZG55 1949 aa13.83□□□□□ -0.2
DEPDC7-203ENST00000427755 ANAPC1Q9H1A4 1944 aa13.83□□□□□ -0.2
DEPDC7-203ENST00000427755 TPRP12270 2363 aaKnown RBP13.83□□□□□ -0.2
DEPDC7-203ENST00000427755 PTPRDP23468 1912 aa13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 IKBKBO14920 756 aa13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 HOXC11O43248 304 aaPredicted RBP13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 ADAM23O75077 832 aa13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 KLF8O95600 359 aaPredicted RBP13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 APODP05090 189 aa13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 MYL1P05976 194 aa13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 PMLP29590 882 aa13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 GBP1P32455 592 aa13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 TIE1P35590 1138 aa13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 KDSRQ06136 332 aa13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 N4BP2L1Q5TBK1 243 aaPredicted RBP13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 C11orf74Q86VG3 221 aa13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 UNC93AQ86WB7 457 aa13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 C12orf29Q8N999 325 aa13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 SPRYD3Q8NCJ5 442 aa13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 TWNKQ96RR1 684 aa13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 LSM14BQ9BX40 385 aaKnown RBP13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 APOBEC3GQ9HC16 384 aaKnown RBP13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 ARHGEF4Q9NR80 690 aa13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 HCN2Q9UL51 889 aa13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 ZDHHC9Q9Y397 364 aa13.82□□□□□ -0.2
DEPDC7-203ENST00000427755 FAM237AA0A1B0GTK4 181 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 HHLA1C9JL84 531 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 MAPK13O15264 365 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 TLR5O60602 858 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 CLSTN1O94985 981 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 HLA-DRAP01903 254 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 PRR29P0C7W0 189 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 P4HA1P13674 534 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 TNFRSF4P43489 277 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 MAP3K7CLP57077 242 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 GAD2Q05329 585 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 INCA1Q0VD86 236 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 NFIL3Q16649 462 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 CEP135Q66GS9 1140 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 RNF43Q68DV7 783 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 GPRIN1Q7Z2K8 1008 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 TMEM25Q86YD3 366 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 EDEM2Q9BV94 578 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 ZDHHC4Q9NPG8 344 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 SPHK2Q9NRA0 654 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 FAM49BQ9NUQ9 324 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 OSER1Q9NX31 292 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 FRMD4BQ9Y2L6 1034 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 SH3BP1Q9Y3L3 701 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 ACACBO00763 2458 aa13.81□□□□□ -0.2
DEPDC7-203ENST00000427755 LNP1A1A4G5 178 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 TRIM24O15164 1050 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 CALUO43852 315 aaPredicted RBP13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 TULP3O75386 442 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 ALDH1A2O94788 518 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 RHOBTB3O94955 611 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 KCNK5O95279 499 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 TBX18O95935 607 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 P2RY2P41231 377 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 PIK3CAP42336 1068 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 VAMP7P51809 220 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 NDUFA8P51970 172 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 PPP3CAQ08209 521 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 EOGTQ5NDL2 527 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 CLEC20AQ6ZU45 233 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 HTR3DQ70Z44 454 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 FRMD1Q8N878 549 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 NAT16Q8N8M0 369 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 WHAMMQ8TF30 809 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 RLN3Q8WXF3 142 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 HNRNPABQ99729 332 aaKnown RBP13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 KLF16Q9BXK1 252 aaPredicted RBP13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 FBXO44Q9H4M3 255 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 CYLDQ9NQC7 956 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.8□□□□□ -0.26e-6■■■■■ 48.1
DEPDC7-203ENST00000427755 SCML2Q9UQR0 700 aa13.8□□□□□ -0.2
DEPDC7-203ENST00000427755 EPG5Q9HCE0 2579 aa13.79□□□□□ -0.2
DEPDC7-203ENST00000427755 ATG2BQ96BY7 2078 aa13.79□□□□□ -0.2
DEPDC7-203ENST00000427755 TBC1D3BA6NDS4 549 aa13.79□□□□□ -0.2
DEPDC7-203ENST00000427755 C4orf47A7E2U8 309 aa13.79□□□□□ -0.2
DEPDC7-203ENST00000427755 PATE3B3GLJ2 98 aa13.79□□□□□ -0.2
DEPDC7-203ENST00000427755 CYP26A1O43174 497 aa13.79□□□□□ -0.2
DEPDC7-203ENST00000427755 KRT37O76014 449 aa13.79□□□□□ -0.2
DEPDC7-203ENST00000427755 FAM200BP0CF97 657 aa13.79□□□□□ -0.2
DEPDC7-203ENST00000427755 TRIM49P0CI25 452 aa13.79□□□□□ -0.2
DEPDC7-203ENST00000427755 TRIM49CP0CI26 452 aa13.79□□□□□ -0.2
DEPDC7-203ENST00000427755 IRF1P10914 325 aa13.79□□□□□ -0.2
DEPDC7-203ENST00000427755 ADORA2BP29275 332 aa13.79□□□□□ -0.2
DEPDC7-203ENST00000427755 SYKP43405 635 aa13.79□□□□□ -0.2
DEPDC7-203ENST00000427755 MCCD1P59942 119 aaPredicted RBP13.79□□□□□ -0.2
DEPDC7-203ENST00000427755 DPYDQ12882 1025 aa13.79□□□□□ -0.2
DEPDC7-203ENST00000427755 MAP7D1Q3KQU3 841 aa13.79□□□□□ -0.2
DEPDC7-203ENST00000427755 CYP2U1Q7Z449 544 aa13.79□□□□□ -0.2
DEPDC7-203ENST00000427755 TTC30AQ86WT1 665 aa13.79□□□□□ -0.2
DEPDC7-203ENST00000427755 MIB1Q86YT6 1006 aa13.79□□□□□ -0.2
DEPDC7-203ENST00000427755 TERB1Q8NA31 727 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms