RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 PHBP35232 272 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 KCNA1Q09470 495 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 ZNF792Q3KQV3 632 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 TMEM119Q4V9L6 283 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 HEATR6Q6AI08 1181 aaKnown RBP11.06□□□□□ -0.64
TCOF1-204ENST00000427724 DCLRE1AQ6PJP8 1040 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 CDKL2Q92772 493 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 ABTB1Q969K4 478 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-204ENST00000427724 RIPOR3Q96MK2 946 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 MCEEQ96PE7 176 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 FAM118BQ9BPY3 351 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 AIPL1Q9NZN9 384 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 WDR35Q9P2L0 1181 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 CPP00450 1065 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 BCAT1P54687 386 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 ARHGAP1Q07960 439 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 UBXN2BQ14CS0 331 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 FUKQ8N0W3 1084 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 ATAD1Q8NBU5 361 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 CFAP61Q8NHU2 1237 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 AUTS2Q8WXX7 1259 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 RAPGEF5Q92565 580 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 ATP2A3Q93084 1043 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 TMA16Q96EY4 203 aaKnown RBP11.06□□□□□ -0.64
TCOF1-204ENST00000427724 PITPNM3Q9BZ71 974 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 DMAP1Q9NPF5 467 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-204ENST00000427724 PCDHB8Q9UN66 801 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 CCT8L1PA6NM43 557 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 RASA4BC9J798 803 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 ANKRD63C9JTQ0 380 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 RASA4O43374 803 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 AKT1P31749 480 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 PURAQ00577 322 aaKnown RBP11.06□□□□□ -0.64
TCOF1-204ENST00000427724 AAK1Q2M2I8 961 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 PREPLQ4J6C6 727 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-204ENST00000427724 CNKSR3Q6P9H4 555 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 BRSK2Q8IWQ3 736 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 FBXO25Q8TCJ0 367 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 RILPQ96NA2 401 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 TSEN34Q9BSV6 310 aaKnown RBP11.06□□□□□ -0.64
TCOF1-204ENST00000427724 KCNMB3Q9NPA1 279 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 SAYSD1Q9NPB0 183 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 NID2Q14112 1375 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 CFAP73A6NFT4 308 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 VDRP11473 427 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 PTPN11Q06124 597 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-204ENST00000427724 POLD3Q15054 466 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-204ENST00000427724 AGBL2Q5U5Z8 902 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 PHLDB3Q6NSJ2 640 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 RD3Q7Z3Z2 195 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 DNAJC19Q96DA6 116 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 BTBD6Q96KE9 485 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 FGFBP2Q9BYJ0 223 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 IP6K2Q9UHH9 426 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 PHRF1Q9P1Y6 1649 aaKnown RBP11.05□□□□□ -0.64
TCOF1-204ENST00000427724 RGPD5Q99666 1765 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 TCP11X1B4DZS4 312 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 PHF2O75151 1096 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 CAND2O75155 1236 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 NFICP08651 508 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 ERFP50548 548 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 CREMQ03060 361 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 MAP7Q14244 749 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 ECM1Q16610 540 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 THEMIS2Q5TEJ8 643 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 ELOVL4Q9GZR5 314 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 WNT8AQ9H1J5 351 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 EP400Q96L91 3159 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 IGKV6D-41A0A0C4DH26 115 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 CBX4O00257 560 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 OPLAHO14841 1288 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 S100BP04271 92 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-204ENST00000427724 OR4Q2P0C623 313 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 TARBP2Q15633 366 aaKnown RBP11.05□□□□□ -0.64
TCOF1-204ENST00000427724 RABGAP1LQ5R372 815 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 SLC39A5Q6ZMH5 540 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 CHPFQ8IZ52 775 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 ATPAF2Q8N5M1 289 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 ACTRT1Q8TDG2 376 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 MS4A4AQ96JQ5 239 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 TTYH3Q9C0H2 523 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 GDF3Q9NR23 364 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 AFF4Q9UHB7 1163 aaKnown RBP11.05□□□□□ -0.64
TCOF1-204ENST00000427724 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.05□□□□□ -0.64
TCOF1-204ENST00000427724 CCDC78A2IDD5 438 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 EEF2KO00418 725 aaKnown RBP11.05□□□□□ -0.64
TCOF1-204ENST00000427724 RTN2O75298 545 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 INHBAP08476 426 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 CSH1P0DML2 217 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 CSH2P0DML3 217 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 HNRNPH3P31942 346 aaKnown RBP11.05□□□□□ -0.64
TCOF1-204ENST00000427724 RABGGTBP53611 331 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 PRAMEP78395 509 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 DDR2Q16832 855 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 ZNF662Q6ZS27 426 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 TRPM8Q7Z2W7 1104 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 FAM131BQ86XD5 332 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 GBP7Q8N8V2 638 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-204ENST00000427724 MAB21L3Q8N8X9 362 aa11.05□□□□□ -0.64
TCOF1-204ENST00000427724 RSPH1Q8WYR4 309 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms