RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 HSFX1Q9UBD0 423 aa6.48□□□□□ -1.37
C9orf3-205ENST00000427193 RUVBL1Q9Y265 456 aaKnown RBP6.48□□□□□ -1.37
C9orf3-205ENST00000427193 ARHGEF17Q96PE2 2063 aaPredicted RBP6.48□□□□□ -1.37
C9orf3-205ENST00000427193 FAM205AQ6ZU69 1335 aa6.48□□□□□ -1.37
C9orf3-205ENST00000427193 SALL1Q9NSC2 1324 aa6.48□□□□□ -1.37
C9orf3-205ENST00000427193 CDHR4A6H8M9 788 aa6.47□□□□□ -1.37
C9orf3-205ENST00000427193 YDJCA8MPS7 323 aa6.47□□□□□ -1.37
C9orf3-205ENST00000427193 C1QL1O75973 258 aa6.47□□□□□ -1.37
C9orf3-205ENST00000427193 PRKD3O94806 890 aa6.47□□□□□ -1.37
C9orf3-205ENST00000427193 AMY1AP04745 511 aa6.47□□□□□ -1.37
C9orf3-205ENST00000427193 IFIT1P09914 478 aaKnown RBP6.47□□□□□ -1.37
C9orf3-205ENST00000427193 UQCRFS1P1P0C7P4 283 aa6.47□□□□□ -1.37
C9orf3-205ENST00000427193 DDCP20711 480 aa6.47□□□□□ -1.37
C9orf3-205ENST00000427193 GYG1P46976 350 aa6.47□□□□□ -1.37
C9orf3-205ENST00000427193 SREBF2Q12772 1141 aa6.47□□□□□ -1.37
C9orf3-205ENST00000427193 GEN1Q17RS7 908 aa6.47□□□□□ -1.37
C9orf3-205ENST00000427193 DACT2Q5SW24 774 aa6.47□□□□□ -1.37
C9orf3-205ENST00000427193 NLGN4YQ8NFZ3 816 aaPredicted RBP6.47□□□□□ -1.37
C9orf3-205ENST00000427193 ZNF384Q8TF68 577 aa6.47□□□□□ -1.37
C9orf3-205ENST00000427193 TMX4Q9H1E5 349 aaPredicted RBP6.47□□□□□ -1.37
C9orf3-205ENST00000427193 CD209Q9NNX6 404 aa6.47□□□□□ -1.37
C9orf3-205ENST00000427193 DNM3Q9UQ16 869 aa6.47□□□□□ -1.37
C9orf3-205ENST00000427193 LAMA2P24043 3122 aaKnown RBP6.47□□□□□ -1.37
C9orf3-205ENST00000427193 ASTN2O75129 1339 aaPredicted RBP6.47□□□□□ -1.37
C9orf3-205ENST00000427193 EYSQ5T1H1 3165 aa6.46□□□□□ -1.38
C9orf3-205ENST00000427193 TRGV11A0A075B6L2 103 aa6.46□□□□□ -1.38
C9orf3-205ENST00000427193 TCRBV7S2A1N4TA0A589 114 aa6.46□□□□□ -1.38
C9orf3-205ENST00000427193 ERC2O15083 957 aa6.46□□□□□ -1.38
C9orf3-205ENST00000427193 GPR39O43194 453 aa6.46□□□□□ -1.38
C9orf3-205ENST00000427193 PEX1O43933 1283 aa6.46□□□□□ -1.38
C9orf3-205ENST00000427193 RBMXL2O75526 392 aaKnown RBP6.46□□□□□ -1.38
C9orf3-205ENST00000427193 UFL1O94874 794 aa6.46□□□□□ -1.38
C9orf3-205ENST00000427193 ZFPL1O95159 310 aa6.46□□□□□ -1.38
C9orf3-205ENST00000427193 CREMQ03060 361 aa6.46□□□□□ -1.38
C9orf3-205ENST00000427193 TMED8Q6PL24 325 aaPredicted RBP6.46□□□□□ -1.38
C9orf3-205ENST00000427193 MOB2Q70IA6 237 aa6.46□□□□□ -1.38
C9orf3-205ENST00000427193 SPATS2Q86XZ4 545 aaKnown RBP6.46□□□□□ -1.38
C9orf3-205ENST00000427193 ZGPATQ8N5A5 531 aaKnown RBP6.46□□□□□ -1.38
C9orf3-205ENST00000427193 KBTBD3Q8NAB2 608 aa6.46□□□□□ -1.38
C9orf3-205ENST00000427193 OR2I1PQ8NGU4 316 aa6.46□□□□□ -1.38
C9orf3-205ENST00000427193 EVI5LQ96CN4 794 aa6.46□□□□□ -1.38
C9orf3-205ENST00000427193 NEUROD6Q96NK8 337 aa6.46□□□□□ -1.38
C9orf3-205ENST00000427193 C7orf25Q9BPX7 421 aa6.46□□□□□ -1.38
C9orf3-205ENST00000427193 COA1Q9GZY4 146 aa6.46□□□□□ -1.38
C9orf3-205ENST00000427193 KLK15Q9H2R5 256 aa6.46□□□□□ -1.38
C9orf3-205ENST00000427193 GGA3Q9NZ52 723 aa6.46□□□□□ -1.38
C9orf3-205ENST00000427193 GPR45Q9Y5Y3 372 aa6.46□□□□□ -1.38
C9orf3-205ENST00000427193 SPEF2Q9C093 1822 aa6.46□□□□□ -1.38
C9orf3-205ENST00000427193 RPS12P25398 132 aaKnown RBP6.45□□□□□ -1.38
C9orf3-205ENST00000427193 CHMLP26374 656 aa6.45□□□□□ -1.38
C9orf3-205ENST00000427193 FOLR3P41439 243 aa6.45□□□□□ -1.38
C9orf3-205ENST00000427193 FKBP1AP62942 108 aaKnown RBP6.45□□□□□ -1.38
C9orf3-205ENST00000427193 CCDC158Q5M9N0 1113 aa6.45□□□□□ -1.38
C9orf3-205ENST00000427193 DEFB123Q8N688 67 aa6.45□□□□□ -1.38
C9orf3-205ENST00000427193 Q8NA96 180 aa6.45□□□□□ -1.38
C9orf3-205ENST00000427193 SPATA5Q8NB90 893 aa6.45□□□□□ -1.38
C9orf3-205ENST00000427193 WDR66Q8TBY9 1149 aa6.45□□□□□ -1.38
C9orf3-205ENST00000427193 TBC1D15Q8TC07 691 aa6.45□□□□□ -1.38
C9orf3-205ENST00000427193 EDC3Q96F86 508 aaKnown RBP6.45□□□□□ -1.38
C9orf3-205ENST00000427193 ERO1AQ96HE7 468 aa6.45□□□□□ -1.38
C9orf3-205ENST00000427193 GPATCH3Q96I76 525 aa6.45□□□□□ -1.38
C9orf3-205ENST00000427193 C11orf54Q9H0W9 315 aaPredicted RBP6.45□□□□□ -1.38
C9orf3-205ENST00000427193 IL25Q9H293 177 aa6.45□□□□□ -1.38
C9orf3-205ENST00000427193 BOLA2Q9H3K6 86 aa6.45□□□□□ -1.38
C9orf3-205ENST00000427193 PIH1D3Q9NQM4 214 aaKnown RBP6.45□□□□□ -1.38
C9orf3-205ENST00000427193 PAG1Q9NWQ8 432 aa6.45□□□□□ -1.38
C9orf3-205ENST00000427193 MTMR10Q9NXD2 777 aa6.45□□□□□ -1.38
C9orf3-205ENST00000427193 ZNF646O15015 1829 aaPredicted RBP6.45□□□□□ -1.38
C9orf3-205ENST00000427193 LRRC3CA6NJW4 275 aa6.44□□□□□ -1.38
C9orf3-205ENST00000427193 UBE2Q2LH0YL09 131 aa6.44□□□□□ -1.38
C9orf3-205ENST00000427193 K7ESF4 209 aa6.44□□□□□ -1.38
C9orf3-205ENST00000427193 PSMD14O00487 310 aa6.44□□□□□ -1.38
C9orf3-205ENST00000427193 KIAA0391O15091 583 aaKnown RBP6.44□□□□□ -1.38
C9orf3-205ENST00000427193 ORC4O43929 436 aa6.44□□□□□ -1.38
C9orf3-205ENST00000427193 EIF5BO60841 1220 aaKnown RBP6.44□□□□□ -1.38
C9orf3-205ENST00000427193 HAUS5O94927 633 aa6.44□□□□□ -1.38
C9orf3-205ENST00000427193 AGXTP21549 392 aa6.44□□□□□ -1.38
C9orf3-205ENST00000427193 KRTAP10-11P60412 298 aa6.44□□□□□ -1.38
C9orf3-205ENST00000427193 CTXN1P60606 82 aa6.44□□□□□ -1.38
C9orf3-205ENST00000427193 ERVK-21P61565 698 aa6.44□□□□□ -1.38
C9orf3-205ENST00000427193 FOXF2Q12947 444 aa6.44□□□□□ -1.38
C9orf3-205ENST00000427193 CAVIN4Q5BKX8 364 aa6.44□□□□□ -1.38
C9orf3-205ENST00000427193 KIAA0895LQ68EN5 471 aa6.44□□□□□ -1.38
C9orf3-205ENST00000427193 LHFPL2Q6ZUX7 228 aa6.44□□□□□ -1.38
C9orf3-205ENST00000427193 Q7L0L9 218 aa6.44□□□□□ -1.38
C9orf3-205ENST00000427193 ZNF804AQ7Z570 1209 aa6.44□□□□□ -1.38
C9orf3-205ENST00000427193 UBE2Q1Q7Z7E8 422 aa6.44□□□□□ -1.38
C9orf3-205ENST00000427193 SRRM1Q8IYB3 904 aaKnown RBP6.44□□□□□ -1.38
C9orf3-205ENST00000427193 CERS5Q8N5B7 392 aa6.44□□□□□ -1.38
C9orf3-205ENST00000427193 UROC1Q96N76 676 aa6.44□□□□□ -1.38
C9orf3-205ENST00000427193 TMA7Q9Y2S6 64 aaKnown RBP6.44□□□□□ -1.38
C9orf3-205ENST00000427193 A0A1W2PS29 197 aa6.43□□□□□ -1.38
C9orf3-205ENST00000427193 CCDC151A5D8V7 595 aa6.43□□□□□ -1.38
C9orf3-205ENST00000427193 GOLIM4O00461 696 aa6.43□□□□□ -1.38
C9orf3-205ENST00000427193 EPB41L2O43491 1005 aaKnown RBP6.43□□□□□ -1.38
C9orf3-205ENST00000427193 VIL1P09327 827 aaKnown RBP6.43□□□□□ -1.38
C9orf3-205ENST00000427193 FCER1AP12319 257 aa6.43□□□□□ -1.38
C9orf3-205ENST00000427193 WASP42768 502 aa6.43□□□□□ -1.38
C9orf3-205ENST00000427193 SLC4A8Q2Y0W8 1093 aa6.43□□□□□ -1.38
C9orf3-205ENST00000427193 TTC39AQ5SRH9 613 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms