RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 CACNA2D1P54289 1103 aa15.57■□□□□ 0.08
PDAP1-202ENST00000426447 TNNC1P63316 161 aa15.57■□□□□ 0.08
PDAP1-202ENST00000426447 WDR45BQ5MNZ6 344 aa15.57■□□□□ 0.08
PDAP1-202ENST00000426447 LARP1BQ659C4 914 aaKnown RBP15.57■□□□□ 0.08
PDAP1-202ENST00000426447 GRAMD4Q6IC98 578 aa15.57■□□□□ 0.08
PDAP1-202ENST00000426447 CCNI2Q6ZMN8 369 aaPredicted RBP15.57■□□□□ 0.08
PDAP1-202ENST00000426447 USP49Q70CQ1 688 aa15.57■□□□□ 0.08
PDAP1-202ENST00000426447 TMEM25Q86YD3 366 aa15.57■□□□□ 0.08
PDAP1-202ENST00000426447 BBS7Q8IWZ6 715 aa15.57■□□□□ 0.08
PDAP1-202ENST00000426447 ETFBKMTQ8IXQ9 262 aa15.57■□□□□ 0.08
PDAP1-202ENST00000426447 IPO4Q8TEX9 1081 aaKnown RBP15.57■□□□□ 0.08
PDAP1-202ENST00000426447 SCFD1Q8WVM8 642 aa15.57■□□□□ 0.08
PDAP1-202ENST00000426447 FOXJ1Q92949 421 aa15.57■□□□□ 0.08
PDAP1-202ENST00000426447 DNAJC19Q96DA6 116 aa15.57■□□□□ 0.08
PDAP1-202ENST00000426447 ZNF419Q96HQ0 510 aaPredicted RBP15.57■□□□□ 0.08
PDAP1-202ENST00000426447 KIF2CQ99661 725 aa15.57■□□□□ 0.08
PDAP1-202ENST00000426447 OLFML3Q9NRN5 406 aa15.57■□□□□ 0.08
PDAP1-202ENST00000426447 ANAPC1Q9H1A4 1944 aa15.56■□□□□ 0.08
PDAP1-202ENST00000426447 WDFY3Q8IZQ1 3526 aa15.56■□□□□ 0.08
PDAP1-202ENST00000426447 PCNX2A6NKB5 2137 aa15.56■□□□□ 0.08
PDAP1-202ENST00000426447 A0A1W2PQF6 199 aa15.56■□□□□ 0.08
PDAP1-202ENST00000426447 A8MXQ7 604 aa15.56■□□□□ 0.08
PDAP1-202ENST00000426447 CLDN5O00501 218 aa15.56■□□□□ 0.08
PDAP1-202ENST00000426447 TRIM24O15164 1050 aa15.56■□□□□ 0.08
PDAP1-202ENST00000426447 IRF1P10914 325 aa15.56■□□□□ 0.08
PDAP1-202ENST00000426447 NDUFV2P19404 249 aa15.56■□□□□ 0.08
PDAP1-202ENST00000426447 MAOBP27338 520 aa15.56■□□□□ 0.08
PDAP1-202ENST00000426447 EGFLAMQ63HQ2 1017 aa15.56■□□□□ 0.08
PDAP1-202ENST00000426447 MIB1Q86YT6 1006 aa15.56■□□□□ 0.08
PDAP1-202ENST00000426447 SETD7Q8WTS6 366 aaKnown RBP15.56■□□□□ 0.08
PDAP1-202ENST00000426447 OVCA2Q8WZ82 227 aa15.56■□□□□ 0.08
PDAP1-202ENST00000426447 XPO6Q96QU8 1125 aaKnown RBP15.56■□□□□ 0.08
PDAP1-202ENST00000426447 ACOX2Q99424 681 aa15.56■□□□□ 0.08
PDAP1-202ENST00000426447 ZNF518BQ9C0D4 1074 aa15.56■□□□□ 0.08
PDAP1-202ENST00000426447 PANK4Q9NVE7 773 aa15.56■□□□□ 0.08
PDAP1-202ENST00000426447 DNAJC17Q9NVM6 304 aaKnown RBP15.56■□□□□ 0.08
PDAP1-202ENST00000426447 SMC3Q9UQE7 1217 aa15.56■□□□□ 0.08
PDAP1-202ENST00000426447 STARD13Q9Y3M8 1113 aa15.56■□□□□ 0.08
PDAP1-202ENST00000426447 PTPRJQ12913 1337 aa15.56■□□□□ 0.08
PDAP1-202ENST00000426447 PTPRDP23468 1912 aa15.55■□□□□ 0.08
PDAP1-202ENST00000426447 TACC1O75410 805 aa15.55■□□□□ 0.08
PDAP1-202ENST00000426447 CST3P01034 146 aaPredicted RBP15.55■□□□□ 0.08
PDAP1-202ENST00000426447 FAM163BP0C2L3 166 aa15.55■□□□□ 0.08
PDAP1-202ENST00000426447 TNNI1P19237 187 aa15.55■□□□□ 0.08
PDAP1-202ENST00000426447 WDR72Q3MJ13 1102 aa15.55■□□□□ 0.08
PDAP1-202ENST00000426447 KIAA1324Q6UXG2 1013 aaKnown RBP15.55■□□□□ 0.08
PDAP1-202ENST00000426447 STXBP4Q6ZWJ1 553 aa15.55■□□□□ 0.08
PDAP1-202ENST00000426447 TRAPPC11Q7Z392 1133 aa15.55■□□□□ 0.08
PDAP1-202ENST00000426447 BRAPQ7Z569 592 aa15.55■□□□□ 0.08
PDAP1-202ENST00000426447 CBWD2Q8IUF1 395 aa15.55■□□□□ 0.08
PDAP1-202ENST00000426447 WDR49Q8IV35 697 aa15.55■□□□□ 0.08
PDAP1-202ENST00000426447 MDM1Q8TC05 714 aa15.55■□□□□ 0.08
PDAP1-202ENST00000426447 ZFRQ96KR1 1074 aaKnown RBP15.55■□□□□ 0.08
PDAP1-202ENST00000426447 KCNK16Q96T55 309 aa15.55■□□□□ 0.08
PDAP1-202ENST00000426447 MED10Q9BTT4 135 aa15.55■□□□□ 0.08
PDAP1-202ENST00000426447 B3GNT5Q9BYG0 378 aa15.55■□□□□ 0.08
PDAP1-202ENST00000426447 ZDHHC5Q9C0B5 715 aa15.55■□□□□ 0.08
PDAP1-202ENST00000426447 DPEP3Q9H4B8 488 aa15.55■□□□□ 0.08
PDAP1-202ENST00000426447 CCSER2Q9H7U1 834 aa15.55■□□□□ 0.08
PDAP1-202ENST00000426447 HELZP42694 1942 aaKnown RBP15.55■□□□□ 0.08
PDAP1-202ENST00000426447 ATP8B3O60423 1300 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 MEI4A8MW99 385 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 NEDD8-MDP1E9PL57 170 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 GJB3O75712 270 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 CLSTN1O94985 981 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 DLATP10515 647 aaKnown RBP15.54■□□□□ 0.08
PDAP1-202ENST00000426447 TPGS1Q6ZTW0 290 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 TOGARAM2Q6ZUX3 1019 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 RDH13Q8NBN7 331 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 B3GALNT2Q8NCR0 500 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 SCAMP5Q8TAC9 235 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 LRIG1Q96JA1 1093 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 TMX3Q96JJ7 454 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 BBS2Q9BXC9 721 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 FGFBP2Q9BYJ0 223 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 PANK2Q9BZ23 570 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 MIR1-1HGQ9H1L0 117 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 SLC6A17Q9H1V8 727 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 KIAA1586Q9HCI6 787 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 TMEM30AQ9NV96 361 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 WDR35Q9P2L0 1181 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 NXF1Q9UBU9 619 aaKnown RBP15.54■□□□□ 0.08
PDAP1-202ENST00000426447 HCN2Q9UL51 889 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 RAXQ9Y2V3 346 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 NME7Q9Y5B8 376 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 RAD54BQ9Y620 910 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 ADAMTS9Q9P2N4 1935 aa15.54■□□□□ 0.08
PDAP1-202ENST00000426447 TNRC6BQ9UPQ9 1833 aaKnown RBP15.54■□□□□ 0.08
PDAP1-202ENST00000426447 FASNP49327 2511 aaKnown RBP15.54■□□□□ 0.08
PDAP1-202ENST00000426447 CACNA1EQ15878 2313 aa15.53■□□□□ 0.08
PDAP1-202ENST00000426447 CD6P30203 668 aa15.53■□□□□ 0.08
PDAP1-202ENST00000426447 GRIK2Q13002 908 aa15.53■□□□□ 0.08
PDAP1-202ENST00000426447 TRPC3Q13507 836 aa15.53■□□□□ 0.08
PDAP1-202ENST00000426447 CCDC73Q6ZRK6 1079 aa15.53■□□□□ 0.08
PDAP1-202ENST00000426447 SLCO6A1Q86UG4 719 aa15.53■□□□□ 0.08
PDAP1-202ENST00000426447 CCDC65Q8IXS2 484 aa15.53■□□□□ 0.08
PDAP1-202ENST00000426447 MRGPRX1Q96LB2 322 aa15.53■□□□□ 0.08
PDAP1-202ENST00000426447 GABRG3Q99928 467 aa15.53■□□□□ 0.08
PDAP1-202ENST00000426447 CACNA2D2Q9NY47 1150 aa15.53■□□□□ 0.08
PDAP1-202ENST00000426447 HSPBP1Q9NZL4 362 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms