RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 RNF169Q8NCN4 708 aa13.93□□□□□ -0.18
USP42-203ENST00000426246 PGBD4Q96DM1 585 aa13.93□□□□□ -0.18
USP42-203ENST00000426246 MRPL4Q9BYD3 311 aaKnown RBP13.93□□□□□ -0.18
USP42-203ENST00000426246 NIFKQ9BYG3 293 aaKnown RBP13.93□□□□□ -0.18
USP42-203ENST00000426246 CCL15-CCL14A0A0B4J2E2 113 aa13.93□□□□□ -0.18
USP42-203ENST00000426246 PSTPIP1O43586 416 aa13.93□□□□□ -0.18
USP42-203ENST00000426246 STK10O94804 968 aaKnown RBP13.93□□□□□ -0.18
USP42-203ENST00000426246 CELF2O95319 508 aaKnown RBP13.93□□□□□ -0.18
USP42-203ENST00000426246 RTP1P59025 263 aa13.93□□□□□ -0.18
USP42-203ENST00000426246 NME3Q13232 169 aa13.93□□□□□ -0.18
USP42-203ENST00000426246 OLIG2Q13516 323 aa13.93□□□□□ -0.18
USP42-203ENST00000426246 TARBP2Q15633 366 aaKnown RBP13.93□□□□□ -0.18
USP42-203ENST00000426246 CCL15Q16663 113 aa13.93□□□□□ -0.18
USP42-203ENST00000426246 TSNAXIP1Q2TAA8 658 aa13.93□□□□□ -0.18
USP42-203ENST00000426246 ZNF792Q3KQV3 632 aa13.93□□□□□ -0.18
USP42-203ENST00000426246 KHDC1Q4VXA5 237 aaKnown RBP13.93□□□□□ -0.18
USP42-203ENST00000426246 THEMIS2Q5TEJ8 643 aa13.93□□□□□ -0.18
USP42-203ENST00000426246 PPFIBP2Q8ND30 876 aa13.93□□□□□ -0.18
USP42-203ENST00000426246 RXFP2Q8WXD0 754 aa13.93□□□□□ -0.18
USP42-203ENST00000426246 KCNN1Q92952 543 aa13.93□□□□□ -0.18
USP42-203ENST00000426246 NAF1Q96HR8 494 aaKnown RBP13.93□□□□□ -0.18
USP42-203ENST00000426246 UBP1Q9NZI7 540 aa13.93□□□□□ -0.18
USP42-203ENST00000426246 USP18Q9UMW8 372 aa13.93□□□□□ -0.18
USP42-203ENST00000426246 TMEM191CA6NGB0 347 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 LYPLA1O75608 230 aaPredicted RBP13.92□□□□□ -0.18
USP42-203ENST00000426246 GARTP22102 1010 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 TBXAS1P24557 533 aaPredicted RBP13.92□□□□□ -0.18
USP42-203ENST00000426246 GPX6P59796 221 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 ZNF200P98182 395 aaPredicted RBP13.92□□□□□ -0.18
USP42-203ENST00000426246 LAMTOR4Q0VGL1 99 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 METTL7BQ6UX53 244 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 SPNS2Q8IVW8 549 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 GPRC5AQ8NFJ5 357 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 ADAM32Q8TC27 787 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 DEPDC1BQ8WUY9 529 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 CPT1BQ92523 772 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 DHX33Q9H6R0 707 aaKnown RBP13.92□□□□□ -0.18
USP42-203ENST00000426246 NMRK2Q9NPI5 230 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 hCG_1818297A0A087WSY0 165 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 E5RJQ4 531 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 LRCH4O75427 683 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 HMGCRP04035 888 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 MMP8P22894 467 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 RPL10AP62906 217 aaKnown RBP13.92□□□□□ -0.18
USP42-203ENST00000426246 ZNF252P-AS1Q0IIN9 211 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 MYBPC2Q14324 1141 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 CYP1B1Q16678 543 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 PLEKHG4Q58EX7 1191 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 NXNQ6DKJ4 435 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 MAMDC4Q6UXC1 1216 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 KIAA0319LQ8IZA0 1049 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 GTF3C2Q8WUA4 911 aaPredicted RBP13.92□□□□□ -0.18
USP42-203ENST00000426246 KATNBL1Q9H079 304 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 ANKRD12Q6UB98 2062 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 PDE5AO76074 875 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 PTDSS1P48651 473 aaKnown RBP13.92□□□□□ -0.18
USP42-203ENST00000426246 KCTD2Q14681 263 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 ATF7IP2Q5U623 682 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 C1orf146Q5VVC0 180 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 MFSD5Q6N075 450 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 KATNAL2Q8IYT4 538 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 ALLCQ8N6M5 410 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 SERAC1Q96JX3 654 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 GPR20Q99678 358 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 PDGFCQ9NRA1 345 aa13.92□□□□□ -0.18
USP42-203ENST00000426246 CPSF2Q9P2I0 782 aaKnown RBP13.92□□□□□ -0.18
USP42-203ENST00000426246 A0A087WZ62 844 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 ZBTB42B2RXF5 422 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 AQP5P55064 265 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 AP1B1Q10567 949 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 DENND5BQ6ZUT9 1274 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 FAM131BQ86XD5 332 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 PPIL6Q8IXY8 311 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 C3orf20Q8ND61 904 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 CGRRF1Q99675 332 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 FDXACB1Q9BRP7 624 aaPredicted RBP13.91□□□□□ -0.18
USP42-203ENST00000426246 C17orf75Q9HAS0 396 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 ASMTLO95671 621 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 TCN1P20061 433 aaPredicted RBP13.91□□□□□ -0.18
USP42-203ENST00000426246 RFC5P40937 340 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 CELF3Q5SZQ8 465 aaKnown RBP13.91□□□□□ -0.18
USP42-203ENST00000426246 RHBDF2Q6PJF5 856 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 MAN1C1Q9NR34 630 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 AK5Q9Y6K8 562 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 GOLGA8QA0A0J9YX86 632 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 GOLGA8OA6NCC3 632 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 GOLGA8NF8WBI6 632 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 ATP9BO43861 1147 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 OPHN1O60890 802 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 LDHAP00338 332 aaKnown RBP13.91□□□□□ -0.18
USP42-203ENST00000426246 ERBB2P04626 1255 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 ZNF286BP0CG31 522 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 ACO1P21399 889 aaKnown RBP13.91□□□□□ -0.18
USP42-203ENST00000426246 CCNHP51946 323 aaPredicted RBP13.91□□□□□ -0.18
USP42-203ENST00000426246 UBAP2LQ14157 1087 aaKnown RBP13.91□□□□□ -0.18
USP42-203ENST00000426246 TRMT10BQ6PF06 316 aaKnown RBP13.91□□□□□ -0.18
USP42-203ENST00000426246 SLC26A7Q8TE54 656 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 UCMAQ8WVF2 138 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 NMUR2Q9GZQ4 415 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 ARHGAP28Q9P2N2 729 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms