RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 TSPY2A6NKD2 308 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 HNRNPCL2B2RXH8 293 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 INO80B-WBP1J3KQ70 363 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 LEFTY2O00292 366 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 KIAA0355O15063 1070 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 ERC2O15083 957 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 HNRNPCL1O60812 293 aaKnown RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 EPN2O95208 641 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 MBD4O95243 580 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 C1RP00736 705 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 CLEC2LP0C7M8 214 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 TSPY3P0CV98 308 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 TSPY8P0CW00 308 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 EGR2P11161 476 aaPredicted RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 TRIM27P14373 513 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 ATP5JP18859 108 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 MCM5P33992 734 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 KRT20P35900 424 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 IL12RB1P42701 662 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 ASMTP46597 345 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 CTCFP49711 727 aaPredicted RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 CLK3P49761 638 aaKnown RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 PSMD7P51665 324 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 BASP1P80723 227 aaKnown RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 TSPY1Q01534 308 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 TBX2Q13207 712 aaPredicted RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 PRKG2Q13237 762 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 LAMB3Q13751 1172 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 PLCB4Q15147 1175 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 OASLQ15646 514 aaKnown RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 TRIM71Q2Q1W2 868 aaKnown RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 INTS11Q5TA45 600 aaKnown RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 THOC7Q6I9Y2 204 aaKnown RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 CORO6Q6QEF8 472 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 KDELC1Q6UW63 502 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 SYT10Q6XYQ8 523 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 GBP6Q6ZN66 633 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 NCCRP1Q6ZVX7 275 aaPredicted RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 NIM1KQ8IY84 436 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 LSMEM2Q8N112 164 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 NKAPQ8N5F7 415 aaKnown RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 OR52K2Q8NGK3 314 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 CCHCR1Q8TD31 782 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 PARD3BQ8TEW8 1205 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 NTN5Q8WTR8 489 aaPredicted RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 COG3Q96JB2 828 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 HIC2Q96JB3 615 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 THUMPD2Q9BTF0 503 aaKnown RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 REXO4Q9GZR2 422 aaKnown RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 NSRP1Q9H0G5 558 aaKnown RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 BICC1Q9H694 974 aaKnown RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 PARVGQ9HBI0 331 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 NLRC4Q9NPP4 1024 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 TBC1D22BQ9NU19 505 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 GRID1Q9ULK0 1009 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 TMED5Q9Y3A6 229 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 MTF2Q9Y483 593 aaPredicted RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 AFG3L2Q9Y4W6 797 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 MRFAP1Q9Y605 127 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 NCAPD3P42695 1498 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 MAST3O60307 1309 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 ZBTB43O43298 467 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 MGEA5O60502 916 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 TMEM127O75204 238 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 ITGA10O75578 1167 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 TGDSO95455 350 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 YEATS4O95619 227 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 GUCA1CO95843 209 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 VIMP08670 466 aaKnown RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 SNRPA1P09661 255 aaKnown RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 ALAS1P13196 640 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 ALOX15P16050 662 aaPredicted RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 ATP6V1E1P36543 226 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 HAAOP46952 286 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 PHEXP78562 749 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 CDK17Q00537 523 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 KLHL30Q0D2K2 578 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 FAPQ12884 760 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 MLC1Q15049 377 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 CSRP2Q16527 193 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 SUPT20HL1Q3ZLR7 823 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 PDCD4Q53EL6 469 aaKnown RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 HECTD3Q5T447 861 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 FAM102AQ5T9C2 384 aaPredicted RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 ADALQ6DHV7 355 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 FAM180AQ6UWF9 173 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 ZNF600Q6ZNG1 722 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 TOGARAM2Q6ZUX3 1019 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 NANOGNBQ7Z5D8 188 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 XYLT1Q86Y38 959 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 SYT12Q8IV01 421 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 LYSMD2Q8IV50 215 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 SLC15A3Q8IY34 581 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 TCEAL8Q8IYN2 117 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 ZBTB8BQ8NAP8 495 aaPredicted RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 CCDC150Q8NCX0 1101 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 C7orf57Q8NEG2 295 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 IL17RDQ8NFM7 739 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 MDM1Q8TC05 714 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 CAGE1Q8TC20 777 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms