RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 ANO3Q9BYT9 981 aa6.32□□□□□ -1.4
LINC00458-201ENST00000423442 AGXT2Q9BYV1 514 aa6.32□□□□□ -1.4
LINC00458-201ENST00000423442 RNPEPQ9H4A4 650 aa6.32□□□□□ -1.4
LINC00458-201ENST00000423442 NCOA5Q9HCD5 579 aaKnown RBP6.32□□□□□ -1.4
LINC00458-201ENST00000423442 SETD4Q9NVD3 440 aa6.32□□□□□ -1.4
LINC00458-201ENST00000423442 TMEM260Q9NX78 707 aa6.32□□□□□ -1.4
LINC00458-201ENST00000423442 CDC42EP3Q9UKI2 254 aa6.32□□□□□ -1.4
LINC00458-201ENST00000423442 TRAF6Q9Y4K3 522 aa6.32□□□□□ -1.4
LINC00458-201ENST00000423442 CACNA1AO00555 2505 aa6.32□□□□□ -1.4
LINC00458-201ENST00000423442 FRMPD4Q14CM0 1322 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 CCDC194A0A1B0GVG4 234 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 ABHD14A-ACY1A0A1B0GW23 586 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 LINC01553A4QN01 128 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 HAS3O00219 553 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 IPO5O00410 1097 aaKnown RBP6.31□□□□□ -1.4
LINC00458-201ENST00000423442 ATP9AO75110 1047 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 CAND2O75155 1236 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 BAIAP3O94812 1187 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 F2P00734 622 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 CYP3A4P08684 503 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 MSX2P35548 267 aaPredicted RBP6.31□□□□□ -1.4
LINC00458-201ENST00000423442 SREBF1P36956 1147 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 SLC26A2P50443 739 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 TCF15Q12870 199 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 IFRD2Q12894 506 aaPredicted RBP6.31□□□□□ -1.4
LINC00458-201ENST00000423442 NFYCQ13952 458 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 TOB2Q14106 344 aaPredicted RBP6.31□□□□□ -1.4
LINC00458-201ENST00000423442 GPNMBQ14956 572 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 PRR16Q569H4 304 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 TAF2Q6P1X5 1199 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 ARHGAP36Q6ZRI8 547 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 EP400NLQ6ZTU2 488 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 LRRC8DQ7L1W4 858 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 PLPPR4Q7Z2D5 763 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 SEPT8Q92599 483 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 TGS1Q96RS0 853 aaKnown RBP6.31□□□□□ -1.4
LINC00458-201ENST00000423442 RAD9AQ99638 391 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 NAP1L4Q99733 375 aaKnown RBP6.31□□□□□ -1.4
LINC00458-201ENST00000423442 C17orf80Q9BSJ5 609 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 MMRN2Q9H8L6 949 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 TLR9Q9NR96 1032 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 NRBP2Q9NSY0 501 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 VPS54Q9P1Q0 977 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 PUF60Q9UHX1 559 aaKnown RBP6.31□□□□□ -1.4
LINC00458-201ENST00000423442 MUTYHQ9UIF7 546 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 SRPK3Q9UPE1 567 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 R3HCC1Q9Y3T6 440 aaKnown RBP6.31□□□□□ -1.4
LINC00458-201ENST00000423442 EVPLQ92817 2033 aa6.31□□□□□ -1.4
LINC00458-201ENST00000423442 NFASCO94856 1347 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 A0A087X1B8 175 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 GSTTP1A0A1W2PQM5 241 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 DDX39AO00148 427 aaKnown RBP6.3□□□□□ -1.4
LINC00458-201ENST00000423442 PFKFB2O60825 505 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 GJB5O95377 273 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 BAG4O95429 457 aaKnown RBP6.3□□□□□ -1.4
LINC00458-201ENST00000423442 ARP10275 920 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 KCNA2P16389 499 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 MARK3P27448 753 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 INHBCP55103 352 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 ACTR2P61160 394 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 IGBP1P78318 339 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 SETQ01105 290 aaPredicted RBP6.3□□□□□ -1.4
LINC00458-201ENST00000423442 PPFIA1Q13136 1202 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 NONOQ15233 471 aaKnown RBP eCLIP6.3□□□□□ -1.4
LINC00458-201ENST00000423442 SAFBQ15424 915 aaKnown RBP eCLIP6.3□□□□□ -1.4
LINC00458-201ENST00000423442 TCTN1Q2MV58 587 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 HERC4Q5GLZ8 1057 aaPredicted RBP6.3□□□□□ -1.4
LINC00458-201ENST00000423442 ODR4Q5SWX8 454 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 ZNF618Q5T7W0 954 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 SWSAP1Q6NVH7 229 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 BMP8AQ7Z5Y6 402 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 SERINC5Q86VE9 423 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 ZNF575Q86XF7 245 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 ADHFE1Q8IWW8 467 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 BLIDQ8IZY5 108 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 NME8Q8N427 588 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 CYP2W1Q8TAV3 490 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 PGBD1Q96JS3 809 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 ZSCAN31Q96LW9 406 aaPredicted RBP6.3□□□□□ -1.4
LINC00458-201ENST00000423442 AGO4Q9HCK5 861 aaKnown RBP6.3□□□□□ -1.4
LINC00458-201ENST00000423442 ZNF302Q9NR11 478 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 ORC3Q9UBD5 711 aaPredicted RBP6.3□□□□□ -1.4
LINC00458-201ENST00000423442 FAM50BQ9Y247 325 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 PCDHA10Q9Y5I2 948 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 TECTAO75443 2155 aa6.3□□□□□ -1.4
LINC00458-201ENST00000423442 ZFHX2Q9C0A1 2572 aaPredicted RBP6.29□□□□□ -1.4
LINC00458-201ENST00000423442 MAN2B1O00754 1011 aa6.29□□□□□ -1.4
LINC00458-201ENST00000423442 HBP1O60381 514 aa6.29□□□□□ -1.4
LINC00458-201ENST00000423442 GAS7O60861 476 aa6.29□□□□□ -1.4
LINC00458-201ENST00000423442 AMY2AP04746 511 aa6.29□□□□□ -1.4
LINC00458-201ENST00000423442 AMY2BP19961 511 aa6.29□□□□□ -1.4
LINC00458-201ENST00000423442 TMOD1P28289 359 aa6.29□□□□□ -1.4
LINC00458-201ENST00000423442 SFNP31947 248 aa6.29□□□□□ -1.4
LINC00458-201ENST00000423442 MC4RP32245 332 aa6.29□□□□□ -1.4
LINC00458-201ENST00000423442 RPS19P39019 145 aaKnown RBP6.29□□□□□ -1.4
LINC00458-201ENST00000423442 DNM2P50570 870 aa6.29□□□□□ -1.4
LINC00458-201ENST00000423442 AK2P54819 239 aa6.29□□□□□ -1.4
LINC00458-201ENST00000423442 TUBA3CQ13748 450 aa6.29□□□□□ -1.4
LINC00458-201ENST00000423442 GNL2Q13823 731 aaKnown RBP6.29□□□□□ -1.4
LINC00458-201ENST00000423442 TCEAL5Q5H9L2 206 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms