RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 PSMC2P35998 433 aaKnown RBP12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 MPLP40238 635 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 GRIA2P42262 883 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 GCLMP48507 274 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 DGKEP52429 567 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 MAP3K7CLP57077 242 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 GAD2Q05329 585 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 ORC1Q13415 861 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 C2orf27AQ580R0 203 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 PLA2G2CQ5R387 149 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 SPOPLQ6IQ16 392 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 RHBDF2Q6PJF5 856 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 KRBA2Q6ZNG9 492 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 RASSF3Q86WH2 238 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 CCDC150Q8NCX0 1101 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 CHAMP1Q96JM3 812 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 HNRNPABQ99729 332 aaKnown RBP12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 NT5C1AQ9BXI3 368 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 CCSER2Q9H7U1 834 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 PNPLA8Q9NP80 782 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 ARHGEF4Q9NR80 690 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 TLR8Q9NR97 1041 aaKnown RBP12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 VPS45Q9NRW7 570 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 GDF9O60383 454 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 ALDH1A2O94788 518 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 ADORA2BP29275 332 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 GTF2H1P32780 548 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 KDSRQ06136 332 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 GOLGA8FQ08AF8 430 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 GOLGA8DPQ0D2H9 430 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 SF3A2Q15428 464 aaKnown RBP12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 CRY1Q16526 586 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 EDRF1Q3B7T1 1238 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 PREPLQ4J6C6 727 aaPredicted RBP12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 ZCWPW2Q504Y3 356 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 USP39Q53GS9 565 aaKnown RBP12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 LY6G5CQ5SRR4 150 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 BTBD8Q5XKL5 378 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 IL31Q6EBC2 164 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 ANO7Q6IWH7 933 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 C12orf40Q86WS4 652 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 C12orf29Q8N999 325 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 TAS1R2Q8TE23 839 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 DUSP15Q9H1R2 295 aaPredicted RBP12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 GOLPH3LQ9H4A5 285 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 APOBEC3GQ9HC16 384 aaKnown RBP12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 TMEM8AQ9HCN3 771 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 CYLDQ9NQC7 956 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 CHORDC1Q9UHD1 332 aaPredicted RBP12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 SCML2Q9UQR0 700 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 PCDHA5Q9Y5H7 936 aa12.21□□□□□ -0.45
SQSTM1-203ENST00000422245 CNOT1A5YKK6 2376 aaKnown RBP12.21□□□□□ -0.46
SQSTM1-203ENST00000422245 TPRP12270 2363 aaKnown RBP12.21□□□□□ -0.46
SQSTM1-203ENST00000422245 ACACBO00763 2458 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 A0A0A0MRY4 1105 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 CILPO75339 1184 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 BEST1O76090 585 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 KLF8O95600 359 aaPredicted RBP12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 ADRB1P08588 477 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 CHRM1P11229 460 aaPredicted RBP12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 GBP1P32455 592 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 TNFRSF4P43489 277 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 SLC6A11P48066 632 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 PPP3CAQ08209 521 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 ADAM9Q13443 819 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 CCDC6Q16204 474 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 PPM1JQ5JR12 505 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 EOGTQ5NDL2 527 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 PMS2CLQ68D20 193 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 KRT39Q6A163 491 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 KLHDC10Q6PID8 442 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 CLEC20AQ6ZU45 233 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 GPRIN1Q7Z2K8 1008 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 TRMT11Q7Z4G4 463 aaKnown RBP12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 BBS7Q8IWZ6 715 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 ETFBKMTQ8IXQ9 262 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 PHTF2Q8N3S3 785 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 TTC39CQ8N584 583 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 CCDC33Q8N5R6 958 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 ALLCQ8N6M5 410 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 IL17RCQ8NAC3 791 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 MDGA1Q8NFP4 955 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 FAXDC2Q96IV6 333 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 TWNKQ96RR1 684 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 TPSD1Q9BZJ3 242 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 SPHK2Q9NRA0 654 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 LSM7Q9UK45 103 aaKnown RBP12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 MAPK8IP1Q9UQF2 711 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 MYOFQ9NZM1 2061 aa12.2□□□□□ -0.46
SQSTM1-203ENST00000422245 BCLAF3A2AJT9 711 aaKnown RBP12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 HHLA1C9JL84 531 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 DCLK1O15075 740 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 CYP26A1O43174 497 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 STX10O60499 249 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 TULP3O75386 442 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 ZNF202O95125 648 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 IRF1P10914 325 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 EPB41P11171 864 aaKnown RBP12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 CD58P19256 250 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 ATP5C1P36542 298 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms