RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 UBQLN1Q9UMX0 589 aaKnown RBP11.41□□□□□ -0.58
DDX56-203ENST00000421223 SLC15A5A6NIM6 579 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 GABBR2O75899 941 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 PGK1P00558 417 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 GBP2P32456 591 aaPredicted RBP11.41□□□□□ -0.58
DDX56-203ENST00000421223 ELK3P41970 407 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 AFF1P51825 1210 aaKnown RBP11.41□□□□□ -0.58
DDX56-203ENST00000421223 DNAJC3Q13217 504 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 TFDP2Q14188 446 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 DCAF6Q58WW2 860 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 DRICH1Q6PGQ1 229 aaPredicted RBP11.41□□□□□ -0.58
DDX56-203ENST00000421223 CXCL17Q6UXB2 119 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 ARHGEF18Q6ZSZ5 1173 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 ZNF467Q7Z7K2 595 aaPredicted RBP11.41□□□□□ -0.58
DDX56-203ENST00000421223 ARRDC4Q8NCT1 418 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 ADAM32Q8TC27 787 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 CENPTQ96BT3 561 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 RNF157Q96PX1 679 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 VRTNQ9H8Y1 702 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 SHOC2Q9UQ13 582 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 MAD1L1Q9Y6D9 718 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 MRPL42Q9Y6G3 142 aaKnown RBP11.41□□□□□ -0.58
DDX56-203ENST00000421223 IKBKGQ9Y6K9 419 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 LOC285556D6RIA3 1793 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 TNPO2O14787 897 aaKnown RBP11.41□□□□□ -0.58
DDX56-203ENST00000421223 APOL1O14791 398 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 ALOX15BO15296 676 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 KRT4P19013 534 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 GABRB2P47870 512 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 GPX6P59796 221 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 OLFML1Q6UWY5 402 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 CTU1Q7Z7A3 348 aaKnown RBP11.41□□□□□ -0.58
DDX56-203ENST00000421223 PLD5Q8N7P1 536 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 SLC35F5Q8WV83 523 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 TTC25Q96NG3 672 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 SEPT10Q9P0V9 454 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 KIAA1257Q9ULG3 409 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 CREB3O43889 395 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 FSBPO95073 299 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 F2P00734 622 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 RPA3P35244 121 aaPredicted RBP11.4□□□□□ -0.58
DDX56-203ENST00000421223 MSH2P43246 934 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 NDUFV1P49821 464 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 GBE1Q04446 702 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 ANKRD20A8PQ5CZ79 823 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 HHATQ5VTY9 493 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 IGDCC3Q8IVU1 814 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 PCDH19Q8TAB3 1148 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 TRIM56Q9BRZ2 755 aaKnown RBP11.4□□□□□ -0.58
DDX56-203ENST00000421223 PCDH18Q9HCL0 1135 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 ABCF3Q9NUQ8 709 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 MFHAS1Q9Y4C4 1052 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 IPPQ9Y573 584 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 CITO14578 2027 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 C17orf102A2RUQ5 167 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 FAM47DPA6NHR8 397 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 I3L4J1 428 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 AMPD1P23109 780 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 PCK1P35558 622 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 TAF6P49848 677 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 HDAC4P56524 1084 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 PITX1P78337 314 aaPredicted RBP11.4□□□□□ -0.58
DDX56-203ENST00000421223 ADIGQ0VDE8 80 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 IFRD2Q12894 506 aaPredicted RBP11.4□□□□□ -0.58
DDX56-203ENST00000421223 BOLA3Q53S33 107 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 CST9Q5W186 159 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 WSCD1Q658N2 575 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 CEP128Q6ZU80 1094 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 PCGF5Q86SE9 256 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 ADGRF2Q8IZF7 708 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 PITPNM3Q9BZ71 974 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 PLEKHA5Q9HAU0 1116 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 SLCO1B3Q9NPD5 702 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 HAUS2Q9NVX0 235 aa11.4□□□□□ -0.58
DDX56-203ENST00000421223 MAGED2Q9UNF1 606 aaPredicted RBP11.4□□□□□ -0.58
DDX56-203ENST00000421223 SMIM35A0A1B0GVV1 85 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 MYADML2A6NDP7 307 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 CCT8L1PA6NM43 557 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 CLUHO75153 1309 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 CYP2F1P24903 491 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 GCAP28676 217 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 PHBP35232 272 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 TRIP12Q14669 1992 aaPredicted RBP11.39□□□□□ -0.59
DDX56-203ENST00000421223 FSCN1Q16658 493 aaKnown RBP11.39□□□□□ -0.59
DDX56-203ENST00000421223 CCDC185Q8N715 623 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 ATP11CQ8NB49 1132 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 MAML1Q92585 1016 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 GAD1Q99259 594 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 PAFAH2Q99487 392 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 NMRK2Q9NPI5 230 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 GNEQ9Y223 722 aaKnown RBP11.39□□□□□ -0.59
DDX56-203ENST00000421223 CYB561D2O14569 222 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 FOXN2P32314 431 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 WDR4P57081 412 aaKnown RBP11.39□□□□□ -0.59
DDX56-203ENST00000421223 IL9RQ01113 521 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 TNFAIP8L3Q5GJ75 292 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 PPP1R21Q6ZMI0 780 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 CYP4V2Q6ZWL3 525 aaPredicted RBP11.39□□□□□ -0.59
DDX56-203ENST00000421223 TRABD2AQ86V40 505 aa11.39□□□□□ -0.59
DDX56-203ENST00000421223 PIGZQ86VD9 579 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms