RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 LAMA1P25391 3075 aa18.37■□□□□ 0.53
MSH6-203ENST00000420813 SCAMP3O14828 347 aaKnown RBP18.37■□□□□ 0.53
MSH6-203ENST00000420813 HOXC11O43248 304 aaPredicted RBP18.37■□□□□ 0.53
MSH6-203ENST00000420813 CHRM1P11229 460 aaPredicted RBP18.37■□□□□ 0.53
MSH6-203ENST00000420813 NR2F2P24468 414 aa18.37■□□□□ 0.53
MSH6-203ENST00000420813 GRIA2P42262 883 aa18.37■□□□□ 0.53
MSH6-203ENST00000420813 SLC6A11P48066 632 aa18.37■□□□□ 0.53
MSH6-203ENST00000420813 NDUFA8P51970 172 aa18.37■□□□□ 0.53
MSH6-203ENST00000420813 GAD2Q05329 585 aa18.37■□□□□ 0.53
MSH6-203ENST00000420813 CCDC6Q16204 474 aa18.37■□□□□ 0.53
MSH6-203ENST00000420813 LY6G5CQ5SRR4 150 aa18.37■□□□□ 0.53
MSH6-203ENST00000420813 INTS8Q75QN2 995 aaKnown RBP18.37■□□□□ 0.53
MSH6-203ENST00000420813 C12orf40Q86WS4 652 aa18.37■□□□□ 0.53
MSH6-203ENST00000420813 ARHGEF4Q9NR80 690 aa18.37■□□□□ 0.53
MSH6-203ENST00000420813 TLR8Q9NR97 1041 aaKnown RBP18.37■□□□□ 0.53
MSH6-203ENST00000420813 HMGXB4Q9UGU5 601 aa18.37■□□□□ 0.53
MSH6-203ENST00000420813 ZDHHC9Q9Y397 364 aa18.37■□□□□ 0.53
MSH6-203ENST00000420813 TNRC6BQ9UPQ9 1833 aaKnown RBP18.37■□□□□ 0.53
MSH6-203ENST00000420813 CEP192Q8TEP8 1941 aa18.37■□□□□ 0.53
MSH6-203ENST00000420813 PI4KAP42356 2102 aa18.37■□□□□ 0.53
MSH6-203ENST00000420813 DCLK1O15075 740 aa18.36■□□□□ 0.53
MSH6-203ENST00000420813 TLR5O60602 858 aa18.36■□□□□ 0.53
MSH6-203ENST00000420813 BEST1O76090 585 aa18.36■□□□□ 0.53
MSH6-203ENST00000420813 FAM200BP0CF97 657 aa18.36■□□□□ 0.53
MSH6-203ENST00000420813 TNFRSF4P43489 277 aa18.36■□□□□ 0.53
MSH6-203ENST00000420813 MAP3K7CLP57077 242 aa18.36■□□□□ 0.53
MSH6-203ENST00000420813 DPYDQ12882 1025 aa18.36■□□□□ 0.53
MSH6-203ENST00000420813 PREPLQ4J6C6 727 aaPredicted RBP18.36■□□□□ 0.53
MSH6-203ENST00000420813 PMS2CLQ68D20 193 aa18.36■□□□□ 0.53
MSH6-203ENST00000420813 SPOPLQ6IQ16 392 aa18.36■□□□□ 0.53
MSH6-203ENST00000420813 ANO7Q6IWH7 933 aa18.36■□□□□ 0.53
MSH6-203ENST00000420813 ETFBKMTQ8IXQ9 262 aa18.36■□□□□ 0.53
MSH6-203ENST00000420813 PHTF2Q8N3S3 785 aa18.36■□□□□ 0.53
MSH6-203ENST00000420813 GUF1Q8N442 669 aaKnown RBP18.36■□□□□ 0.53
MSH6-203ENST00000420813 CCDC33Q8N5R6 958 aa18.36■□□□□ 0.53
MSH6-203ENST00000420813 C12orf29Q8N999 325 aa18.36■□□□□ 0.53
MSH6-203ENST00000420813 IL17RCQ8NAC3 791 aa18.36■□□□□ 0.53
MSH6-203ENST00000420813 HNRNPABQ99729 332 aaKnown RBP18.36■□□□□ 0.53
MSH6-203ENST00000420813 TPSD1Q9BZJ3 242 aa18.36■□□□□ 0.53
MSH6-203ENST00000420813 SCAND2PQ9GZW5 306 aaPredicted RBP18.36■□□□□ 0.53
MSH6-203ENST00000420813 NACA2Q9H009 215 aa18.36■□□□□ 0.53
MSH6-203ENST00000420813 CYP3A43Q9HB55 503 aa18.36■□□□□ 0.53
MSH6-203ENST00000420813 PNPLA8Q9NP80 782 aa18.36■□□□□ 0.53
MSH6-203ENST00000420813 FAM49BQ9NUQ9 324 aa18.36■□□□□ 0.53
MSH6-203ENST00000420813 ATP6V1DQ9Y5K8 247 aa18.36■□□□□ 0.53
MSH6-203ENST00000420813 CACNA1BQ00975 2339 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 EPG5Q9HCE0 2579 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 A0A1W2PQ27 194 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 A0A1W2PQ64 194 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 A0A1W2PQD8 194 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 BCLAF3A2AJT9 711 aaKnown RBP18.35■□□□□ 0.53
MSH6-203ENST00000420813 ANTXRLA6NF34 631 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 TM4SF5O14894 197 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 ALDH1A2O94788 518 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 PRR29P0C7W0 189 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 KRT13P13646 458 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 RPL13P26373 211 aaKnown RBP18.35■□□□□ 0.53
MSH6-203ENST00000420813 GBP1P32455 592 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 KIR2DL1P43626 348 aaPredicted RBP18.35■□□□□ 0.53
MSH6-203ENST00000420813 MESP2Q0VG99 397 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 ORC1Q13415 861 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 EOGTQ5NDL2 527 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 STPG1Q5TH74 334 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 BTBD8Q5XKL5 378 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 TMEM92Q6UXU6 159 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 BBS7Q8IWZ6 715 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 ALLCQ8N6M5 410 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 MDGA1Q8NFP4 955 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 KCNV2Q8TDN2 545 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 NT5C1AQ9BXI3 368 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 CYLDQ9NQC7 956 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 SPHK2Q9NRA0 654 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 RXFP3Q9NSD7 469 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 SCML2Q9UQR0 700 aa18.35■□□□□ 0.53
MSH6-203ENST00000420813 KLF8O95600 359 aaPredicted RBP18.34■□□□□ 0.53
MSH6-203ENST00000420813 TIE1P35590 1138 aa18.34■□□□□ 0.53
MSH6-203ENST00000420813 PSMC2P35998 433 aaKnown RBP18.34■□□□□ 0.53
MSH6-203ENST00000420813 MCCD1P59942 119 aaPredicted RBP18.34■□□□□ 0.53
MSH6-203ENST00000420813 CREB5Q02930 508 aa18.34■□□□□ 0.53
MSH6-203ENST00000420813 KDSRQ06136 332 aa18.34■□□□□ 0.53
MSH6-203ENST00000420813 PPP3CAQ08209 521 aa18.34■□□□□ 0.53
MSH6-203ENST00000420813 KRBA2Q6ZNG9 492 aa18.34■□□□□ 0.53
MSH6-203ENST00000420813 CLEC20AQ6ZU45 233 aa18.34■□□□□ 0.53
MSH6-203ENST00000420813 HTR3DQ70Z44 454 aa18.34■□□□□ 0.53
MSH6-203ENST00000420813 SFTPA1Q8IWL2 248 aa18.34■□□□□ 0.53
MSH6-203ENST00000420813 FAM186BQ8IYM0 893 aa18.34■□□□□ 0.53
MSH6-203ENST00000420813 TXNDC5Q8NBS9 432 aaKnown RBP18.34■□□□□ 0.53
MSH6-203ENST00000420813 OLIG1Q8TAK6 271 aa18.34■□□□□ 0.53
MSH6-203ENST00000420813 TAS1R2Q8TE23 839 aa18.34■□□□□ 0.53
MSH6-203ENST00000420813 CYFIP2Q96F07 1278 aa18.34■□□□□ 0.53
MSH6-203ENST00000420813 CHAMP1Q96JM3 812 aa18.34■□□□□ 0.53
MSH6-203ENST00000420813 TWNKQ96RR1 684 aa18.34■□□□□ 0.53
MSH6-203ENST00000420813 DNAI2Q9GZS0 605 aa18.34■□□□□ 0.53
MSH6-203ENST00000420813 NIF3L1Q9GZT8 377 aa18.34■□□□□ 0.53
MSH6-203ENST00000420813 APOBEC3GQ9HC16 384 aaKnown RBP18.34■□□□□ 0.53
MSH6-203ENST00000420813 POLMQ9NP87 494 aaPredicted RBP18.34■□□□□ 0.53
MSH6-203ENST00000420813 PCDHA5Q9Y5H7 936 aa18.34■□□□□ 0.53
MSH6-203ENST00000420813 GON4LQ3T8J9 2241 aa18.34■□□□□ 0.53
MSH6-203ENST00000420813 HHLA1C9JL84 531 aa18.33■□□□□ 0.52
MSH6-203ENST00000420813 SGK1O00141 431 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms