RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 HSPBP1Q9NZL4 362 aa15.14■□□□□ 0.01
NFE4-201ENST00000420058 EHD2Q9NZN4 543 aa15.14■□□□□ 0.01
NFE4-201ENST00000420058 TBC1D14Q9P2M4 693 aa15.14■□□□□ 0.01
NFE4-201ENST00000420058 STARD13Q9Y3M8 1113 aa15.14■□□□□ 0.01
NFE4-201ENST00000420058 FLNBO75369 2602 aaKnown RBP15.14■□□□□ 0.01
NFE4-201ENST00000420058 IGHV1OR15-9A0A0B4J2B8 117 aa15.13■□□□□ 0.01
NFE4-201ENST00000420058 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.13■□□□□ 0.01
NFE4-201ENST00000420058 KIAA0391O15091 583 aaKnown RBP15.13■□□□□ 0.01
NFE4-201ENST00000420058 TNNC2P02585 160 aa15.13■□□□□ 0.01
NFE4-201ENST00000420058 CFIP05156 583 aa15.13■□□□□ 0.01
NFE4-201ENST00000420058 NEFLP07196 543 aa15.13■□□□□ 0.01
NFE4-201ENST00000420058 YWHAQP27348 245 aa15.13■□□□□ 0.01
NFE4-201ENST00000420058 WASP42768 502 aa15.13■□□□□ 0.01
NFE4-201ENST00000420058 RPL6Q02878 288 aaKnown RBP15.13■□□□□ 0.01
NFE4-201ENST00000420058 GAD2Q05329 585 aa15.13■□□□□ 0.01
NFE4-201ENST00000420058 ZNF33AQ06730 810 aa15.13■□□□□ 0.01
NFE4-201ENST00000420058 SURF1Q15526 300 aa15.13■□□□□ 0.01
NFE4-201ENST00000420058 NUP93Q8N1F7 819 aa15.13■□□□□ 0.01
NFE4-201ENST00000420058 PGBD3Q8N328 593 aa15.13■□□□□ 0.01
NFE4-201ENST00000420058 OR6B3Q8NGW1 331 aa15.13■□□□□ 0.01
NFE4-201ENST00000420058 CEP76Q8TAP6 659 aa15.13■□□□□ 0.01
NFE4-201ENST00000420058 OTUB2Q96DC9 234 aa15.13■□□□□ 0.01
NFE4-201ENST00000420058 CAMK1GQ96NX5 476 aa15.13■□□□□ 0.01
NFE4-201ENST00000420058 GTPBP2Q9BX10 602 aaKnown RBP15.13■□□□□ 0.01
NFE4-201ENST00000420058 TRIM9Q9C026 710 aa15.13■□□□□ 0.01
NFE4-201ENST00000420058 XYLT2Q9H1B5 865 aa15.13■□□□□ 0.01
NFE4-201ENST00000420058 CCSER2Q9H7U1 834 aa15.13■□□□□ 0.01
NFE4-201ENST00000420058 CD93Q9NPY3 652 aa15.13■□□□□ 0.01
NFE4-201ENST00000420058 CALCOCO1Q9P1Z2 691 aa15.13■□□□□ 0.01
NFE4-201ENST00000420058 CEP192Q8TEP8 1941 aa15.12■□□□□ 0.01
NFE4-201ENST00000420058 FAM92AA1XBS5 289 aa15.12■□□□□ 0.01
NFE4-201ENST00000420058 ARHGAP33O14559 1287 aa15.12■□□□□ 0.01
NFE4-201ENST00000420058 TGFB1I1O43294 461 aa15.12■□□□□ 0.01
NFE4-201ENST00000420058 AP5Z1O43299 807 aa15.12■□□□□ 0.01
NFE4-201ENST00000420058 DPP6P42658 865 aa15.12■□□□□ 0.01
NFE4-201ENST00000420058 GFPT1Q06210 699 aaPredicted RBP15.12■□□□□ 0.01
NFE4-201ENST00000420058 ACAP1Q15027 740 aa15.12■□□□□ 0.01
NFE4-201ENST00000420058 WDR72Q3MJ13 1102 aa15.12■□□□□ 0.01
NFE4-201ENST00000420058 ERICH6BQ5W0A0 696 aa15.12■□□□□ 0.01
NFE4-201ENST00000420058 EPM2AIP1Q7L775 607 aaPredicted RBP15.12■□□□□ 0.01
NFE4-201ENST00000420058 DDX42Q86XP3 938 aaKnown RBP eCLIP15.12■□□□□ 0.01
NFE4-201ENST00000420058 MINDY1Q8N5J2 469 aa15.12■□□□□ 0.01
NFE4-201ENST00000420058 ZNF513Q8N8E2 541 aaPredicted RBP15.12■□□□□ 0.01
NFE4-201ENST00000420058 TERB1Q8NA31 727 aa15.12■□□□□ 0.01
NFE4-201ENST00000420058 OVCA2Q8WZ82 227 aa15.12■□□□□ 0.01
NFE4-201ENST00000420058 P2RY11Q96G91 374 aa15.12■□□□□ 0.01
NFE4-201ENST00000420058 ZNF419Q96HQ0 510 aaPredicted RBP15.12■□□□□ 0.01
NFE4-201ENST00000420058 SLITRK1Q96PX8 696 aa15.12■□□□□ 0.01
NFE4-201ENST00000420058 ELOVL4Q9GZR5 314 aa15.12■□□□□ 0.01
NFE4-201ENST00000420058 SNX25Q9H3E2 840 aa15.12■□□□□ 0.01
NFE4-201ENST00000420058 SPHK2Q9NRA0 654 aa15.12■□□□□ 0.01
NFE4-201ENST00000420058 DNAAF2Q9NVR5 837 aaKnown RBP15.12■□□□□ 0.01
NFE4-201ENST00000420058 DEC1Q9P2X7 70 aa15.12■□□□□ 0.01
NFE4-201ENST00000420058 CABIN1Q9Y6J0 2220 aa15.12■□□□□ 0.01
NFE4-201ENST00000420058 PRRT4C9JH25 899 aa15.11■□□□□ 0.01
NFE4-201ENST00000420058 H0Y626 953 aa15.11■□□□□ 0.01
NFE4-201ENST00000420058 OPHN1O60890 802 aa15.11■□□□□ 0.01
NFE4-201ENST00000420058 TRIM16O95361 564 aa15.11■□□□□ 0.01
NFE4-201ENST00000420058 STAU1O95793 577 aaKnown RBP15.11■□□□□ 0.01
NFE4-201ENST00000420058 NTSR1P30989 418 aa15.11■□□□□ 0.01
NFE4-201ENST00000420058 IFRD2Q12894 506 aaPredicted RBP15.11■□□□□ 0.01
NFE4-201ENST00000420058 HECTD3Q5T447 861 aa15.11■□□□□ 0.01
NFE4-201ENST00000420058 EGFLAMQ63HQ2 1017 aa15.11■□□□□ 0.01
NFE4-201ENST00000420058 SLC36A4Q6YBV0 504 aa15.11■□□□□ 0.01
NFE4-201ENST00000420058 CCDC73Q6ZRK6 1079 aa15.11■□□□□ 0.01
NFE4-201ENST00000420058 PROSER1Q86XN7 944 aa15.11■□□□□ 0.01
NFE4-201ENST00000420058 RDH13Q8NBN7 331 aa15.11■□□□□ 0.01
NFE4-201ENST00000420058 B3GALNT2Q8NCR0 500 aa15.11■□□□□ 0.01
NFE4-201ENST00000420058 ZNF507Q8TCN5 953 aa15.11■□□□□ 0.01
NFE4-201ENST00000420058 FBXO32Q969P5 355 aa15.11■□□□□ 0.01
NFE4-201ENST00000420058 R3HCC1Q9Y3T6 440 aaKnown RBP15.11■□□□□ 0.01
NFE4-201ENST00000420058 KALRNO60229 2985 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 A8MXQ7 604 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 SH3BP5O60239 455 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 TBX18O95935 607 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 CISD3P0C7P0 127 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 DLATP10515 647 aaKnown RBP15.1■□□□□ 0.01
NFE4-201ENST00000420058 HOXB2P14652 356 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 NDUFV2P19404 249 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 CDH8P55286 799 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 MYL6P60660 151 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 PSMD6Q15008 389 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 SNRNP35Q16560 246 aaKnown RBP15.1■□□□□ 0.01
NFE4-201ENST00000420058 C10orf76Q5T2E6 689 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 HTR3DQ70Z44 454 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 HDDC3Q8N4P3 179 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 TRIML1Q8N9V2 468 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 PDZD8Q8NEN9 1154 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 ZMIZ2Q8NF64 920 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 PLEKHO2Q8TD55 490 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 IPO4Q8TEX9 1081 aaKnown RBP15.1■□□□□ 0.01
NFE4-201ENST00000420058 ERLEC1Q96DZ1 483 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 CGRRF1Q99675 332 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 GABRG3Q99928 467 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 SLC6A17Q9H1V8 727 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 AGPAT3Q9NRZ7 376 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 GMIPQ9P107 970 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 GPSM3Q9Y4H4 160 aa15.1■□□□□ 0.01
NFE4-201ENST00000420058 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.1■□□□□ 0.01
NFE4-201ENST00000420058 MORC2Q9Y6X9 1032 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms