RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 VDRP11473 427 aa21.74■■□□□ 1.07
PKNOX1-202ENST00000418336 PDE4CQ08493 712 aa21.74■■□□□ 1.07
PKNOX1-202ENST00000418336 GOLGA7BQ2TAP0 167 aa21.74■■□□□ 1.07
PKNOX1-202ENST00000418336 TMEM270Q6UE05 265 aa21.74■■□□□ 1.07
PKNOX1-202ENST00000418336 Q6ZS52 159 aa21.74■■□□□ 1.07
PKNOX1-202ENST00000418336 ADGRG2Q8IZP9 1017 aa21.74■■□□□ 1.07
PKNOX1-202ENST00000418336 PPM1KQ8N3J5 372 aa21.74■■□□□ 1.07
PKNOX1-202ENST00000418336 KLF16Q9BXK1 252 aaPredicted RBP21.74■■□□□ 1.07
PKNOX1-202ENST00000418336 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.74■■□□□ 1.07
PKNOX1-202ENST00000418336 CFAP97Q9P2B7 532 aa21.74■■□□□ 1.07
PKNOX1-202ENST00000418336 KIAA1549LQ6ZVL6 1849 aa21.73■■□□□ 1.07
PKNOX1-202ENST00000418336 TLR5O60602 858 aa21.73■■□□□ 1.07
PKNOX1-202ENST00000418336 MBL2P11226 248 aaPredicted RBP21.73■■□□□ 1.07
PKNOX1-202ENST00000418336 CHRM1P11229 460 aaPredicted RBP21.73■■□□□ 1.07
PKNOX1-202ENST00000418336 TRIM21P19474 475 aaKnown RBP21.73■■□□□ 1.07
PKNOX1-202ENST00000418336 SLC9A1P19634 815 aa21.73■■□□□ 1.07
PKNOX1-202ENST00000418336 YWHAEP62258 255 aaKnown RBP21.73■■□□□ 1.07
PKNOX1-202ENST00000418336 SGO2Q562F6 1265 aa21.73■■□□□ 1.07
PKNOX1-202ENST00000418336 PM20D1Q6GTS8 502 aa21.73■■□□□ 1.07
PKNOX1-202ENST00000418336 CC2D1AQ6P1N0 951 aaPredicted RBP21.73■■□□□ 1.07
PKNOX1-202ENST00000418336 GJB7Q6PEY0 223 aa21.73■■□□□ 1.07
PKNOX1-202ENST00000418336 TRIM65Q6PJ69 517 aa21.73■■□□□ 1.07
PKNOX1-202ENST00000418336 LCLAT1Q6UWP7 414 aa21.73■■□□□ 1.07
PKNOX1-202ENST00000418336 ZNF276Q8N554 614 aa21.73■■□□□ 1.07
PKNOX1-202ENST00000418336 ATP2A3Q93084 1043 aa21.73■■□□□ 1.07
PKNOX1-202ENST00000418336 SIX2Q9NPC8 291 aa21.73■■□□□ 1.07
PKNOX1-202ENST00000418336 TLR8Q9NR97 1041 aaKnown RBP21.73■■□□□ 1.07
PKNOX1-202ENST00000418336 AJAP1Q9UKB5 411 aaPredicted RBP21.73■■□□□ 1.07
PKNOX1-202ENST00000418336 SCAMP3O14828 347 aaKnown RBP21.72■■□□□ 1.07
PKNOX1-202ENST00000418336 XPO1O14980 1071 aaKnown RBP21.72■■□□□ 1.07
PKNOX1-202ENST00000418336 NCAM2O15394 837 aa21.72■■□□□ 1.07
PKNOX1-202ENST00000418336 CYP17A1P05093 508 aa21.72■■□□□ 1.07
PKNOX1-202ENST00000418336 ZNF528Q3MIS6 628 aa21.72■■□□□ 1.07
PKNOX1-202ENST00000418336 CT47A1Q5JQC4 288 aaPredicted RBP21.72■■□□□ 1.07
PKNOX1-202ENST00000418336 RBBP8NLQ8NC74 664 aaPredicted RBP21.72■■□□□ 1.07
PKNOX1-202ENST00000418336 CRACR2AQ9BSW2 395 aa21.72■■□□□ 1.07
PKNOX1-202ENST00000418336 IER2Q9BTL4 223 aa21.72■■□□□ 1.07
PKNOX1-202ENST00000418336 SPATA6Q9NWH7 488 aaPredicted RBP21.72■■□□□ 1.07
PKNOX1-202ENST00000418336 FBXO4Q9UKT5 387 aa21.72■■□□□ 1.07
PKNOX1-202ENST00000418336 KIAA1257Q9ULG3 409 aa21.72■■□□□ 1.07
PKNOX1-202ENST00000418336 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.72■■□□□ 1.07
PKNOX1-202ENST00000418336 E2F8A0AVK6 867 aa21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 GTPBP10A4D1E9 387 aaKnown RBP21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 BECN2A8MW95 431 aa21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 HOXC13P31276 330 aa21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 OPRD1P41143 372 aa21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 PLA2G4AP47712 749 aa21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 IFNAR2P48551 515 aa21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 MRE11P49959 708 aa21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 GALK1P51570 392 aa21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 BCAT1P54687 386 aa21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 BST2Q10589 180 aaKnown RBP21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 CETN1Q12798 172 aa21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 PKN3Q6P5Z2 889 aa21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 KLHDC10Q6PID8 442 aa21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 RHBDF2Q6PJF5 856 aa21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 ALYREFQ86V81 257 aaKnown RBP21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 UBA3Q8TBC4 463 aa21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 SLC35F5Q8WV83 523 aa21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 P2RY11Q96G91 374 aa21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 SAMSN1Q9NSI8 373 aaKnown RBP21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 CLIC5Q9NZA1 410 aa21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 PCDHB4Q9Y5E5 795 aa21.71■■□□□ 1.07
PKNOX1-202ENST00000418336 MYOFQ9NZM1 2061 aa21.7■■□□□ 1.06
PKNOX1-202ENST00000418336 MDM4O15151 490 aa21.7■■□□□ 1.06
PKNOX1-202ENST00000418336 RARGP13631 454 aa21.7■■□□□ 1.06
PKNOX1-202ENST00000418336 CD19P15391 556 aa21.7■■□□□ 1.06
PKNOX1-202ENST00000418336 BRD2P25440 801 aaKnown RBP21.7■■□□□ 1.06
PKNOX1-202ENST00000418336 PON1P27169 355 aa21.7■■□□□ 1.06
PKNOX1-202ENST00000418336 MESP2Q0VG99 397 aa21.7■■□□□ 1.06
PKNOX1-202ENST00000418336 CNGA2Q16280 664 aa21.7■■□□□ 1.06
PKNOX1-202ENST00000418336 DGKKQ5KSL6 1271 aa21.7■■□□□ 1.06
PKNOX1-202ENST00000418336 DDX42Q86XP3 938 aaKnown RBP eCLIP21.7■■□□□ 1.06
PKNOX1-202ENST00000418336 CPA6Q8N4T0 437 aa21.7■■□□□ 1.06
PKNOX1-202ENST00000418336 TTC16Q8NEE8 873 aa21.7■■□□□ 1.06
PKNOX1-202ENST00000418336 KCTD13Q8WZ19 329 aa21.7■■□□□ 1.06
PKNOX1-202ENST00000418336 NDRG1Q92597 394 aaKnown RBP21.7■■□□□ 1.06
PKNOX1-202ENST00000418336 DNAI2Q9GZS0 605 aa21.7■■□□□ 1.06
PKNOX1-202ENST00000418336 NUDT5Q9UKK9 219 aa21.7■■□□□ 1.06
PKNOX1-202ENST00000418336 ZFHX2Q9C0A1 2572 aaPredicted RBP21.69■■□□□ 1.06
PKNOX1-202ENST00000418336 ANTXRLA6NF34 631 aa21.69■■□□□ 1.06
PKNOX1-202ENST00000418336 PAPSS2O95340 614 aaPredicted RBP21.69■■□□□ 1.06
PKNOX1-202ENST00000418336 EGFP01133 1207 aa21.69■■□□□ 1.06
PKNOX1-202ENST00000418336 RPL34P49207 117 aaKnown RBP21.69■■□□□ 1.06
PKNOX1-202ENST00000418336 TKTL1P51854 596 aa21.69■■□□□ 1.06
PKNOX1-202ENST00000418336 SATB1Q01826 763 aa21.69■■□□□ 1.06
PKNOX1-202ENST00000418336 DHCR24Q15392 516 aa21.69■■□□□ 1.06
PKNOX1-202ENST00000418336 MAN2A1Q16706 1144 aa21.69■■□□□ 1.06
PKNOX1-202ENST00000418336 PMF1Q6P1K2 205 aa21.69■■□□□ 1.06
PKNOX1-202ENST00000418336 TSSK4Q6SA08 328 aa21.69■■□□□ 1.06
PKNOX1-202ENST00000418336 ASCL5Q7RTU5 278 aa21.69■■□□□ 1.06
PKNOX1-202ENST00000418336 C12orf40Q86WS4 652 aa21.69■■□□□ 1.06
PKNOX1-202ENST00000418336 SCML4Q8N228 414 aa21.69■■□□□ 1.06
PKNOX1-202ENST00000418336 SPEM1Q8N4L4 309 aa21.69■■□□□ 1.06
PKNOX1-202ENST00000418336 UBE2TQ9NPD8 197 aaPredicted RBP21.69■■□□□ 1.06
PKNOX1-202ENST00000418336 K7ESF4 209 aa21.68■■□□□ 1.06
PKNOX1-202ENST00000418336 LAMTOR5O43504 91 aa21.68■■□□□ 1.06
PKNOX1-202ENST00000418336 NFATC1O95644 943 aa21.68■■□□□ 1.06
PKNOX1-202ENST00000418336 SETSIPP0DME0 302 aa21.68■■□□□ 1.06
PKNOX1-202ENST00000418336 KCNMA1Q12791 1236 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms