RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 VWC2LB2RUY7 222 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 J3KTA2 159 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 TCERG1O14776 1098 aaKnown RBP5.9□□□□□ -1.46
RFC4-204ENST00000417876 MUSKO15146 869 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 SH3BP5O60239 455 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 CBFA2T3O75081 653 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 TAF5LO75529 589 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 FAM155BO75949 473 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 PYGLP06737 847 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 CKMT1AP12532 417 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 PRKAR1BP31321 381 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 MAPK9P45984 424 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 POU5F1BQ06416 359 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 SPDYAQ5MJ70 313 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 MZT2AQ6P582 158 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 GATAD2AQ86YP4 633 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 RASGRP3Q8IV61 690 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 IZUMO1Q8IYV9 350 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 C11orf44Q8N8P7 122 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 CHST13Q8NET6 341 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 SUN3Q8TAQ9 357 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 GRAMD1AQ96CP6 724 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 MYEOVQ96EZ4 313 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 UBXN10Q96LJ8 280 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 DDX23Q9BUQ8 820 aaKnown RBP5.9□□□□□ -1.46
RFC4-204ENST00000417876 PRDM8Q9NQV8 689 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 AURKAIP1Q9NWT8 199 aaPredicted RBP5.9□□□□□ -1.46
RFC4-204ENST00000417876 RIMKLBQ9ULI2 386 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 SLC27A6Q9Y2P4 619 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 TESMINQ9Y4I5 508 aa5.9□□□□□ -1.46
RFC4-204ENST00000417876 LRPPRCP42704 1394 aaKnown RBP5.9□□□□□ -1.47
RFC4-204ENST00000417876 CARMIL1Q5VZK9 1371 aa5.9□□□□□ -1.47
RFC4-204ENST00000417876 FNDC1Q4ZHG4 1894 aaPredicted RBP5.9□□□□□ -1.47
RFC4-204ENST00000417876 GCC2Q8IWJ2 1684 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 K7ESM1 405 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 ZSCAN9O15535 394 aaPredicted RBP5.89□□□□□ -1.47
RFC4-204ENST00000417876 CCNT2O60583 730 aaKnown RBP5.89□□□□□ -1.47
RFC4-204ENST00000417876 ACTL6BO94805 426 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 AGR2O95994 175 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 VIPP01282 170 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 RHOP08100 348 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 ITGA2BP08514 1039 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 C1SP09871 688 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 YY1P25490 414 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 ATXN1P54253 815 aaKnown RBP5.89□□□□□ -1.47
RFC4-204ENST00000417876 PRKAA2P54646 552 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 TIRAPP58753 221 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 SF3B3Q15393 1217 aaKnown RBP5.89□□□□□ -1.47
RFC4-204ENST00000417876 ALFQ53S48 1182 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 KLHL17Q6TDP4 642 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 CLEC9AQ6UXN8 241 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 RFX8Q6ZV50 586 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 MAVSQ7Z434 540 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 ANKRD18AQ8IVF6 992 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 SLC44A2Q8IWA5 706 aaPredicted RBP5.89□□□□□ -1.47
RFC4-204ENST00000417876 COLGALT2Q8IYK4 626 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 TTC9BQ8N6N2 239 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 MBD3L2Q8NHZ7 208 aaPredicted RBP5.89□□□□□ -1.47
RFC4-204ENST00000417876 CXorf38Q8TB03 319 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 SSH3Q8TE77 659 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 OSCP1Q8WVF1 389 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 ATRIPQ8WXE1 791 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 TRIM63Q969Q1 353 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 WDR24Q96S15 920 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 HELLSQ9NRZ9 838 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 GGA3Q9NZ52 723 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 COL15A1P39059 1388 aa5.89□□□□□ -1.47
RFC4-204ENST00000417876 CENPVL1A0A0U1RR11 272 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 FAM90A18PA6NE21 464 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 FAM90A16PA6NEW6 464 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 FAM90A9PA6NNJ1 464 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 FAM90A5PA8MXJ8 464 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 EIF3FO00303 357 aaPredicted RBP5.88□□□□□ -1.47
RFC4-204ENST00000417876 WDHD1O75717 1129 aaPredicted RBP5.88□□□□□ -1.47
RFC4-204ENST00000417876 FAM90A15PP0C7V4 464 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 FAM90A14PP0C7W9 464 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 SRGNP10124 158 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 LAG3P18627 525 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 CST5P28325 142 aaPredicted RBP5.88□□□□□ -1.47
RFC4-204ENST00000417876 ALDH18A1P54886 795 aaKnown RBP5.88□□□□□ -1.47
RFC4-204ENST00000417876 AP2B1P63010 937 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 EIF2B5Q13144 721 aaKnown RBP5.88□□□□□ -1.47
RFC4-204ENST00000417876 CUL4BQ13620 913 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 BTBD16Q32M84 506 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 DTX2Q86UW9 622 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 HERC6Q8IVU3 1022 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 CLASRPQ8N2M8 674 aaKnown RBP5.88□□□□□ -1.47
RFC4-204ENST00000417876 MYCBPAPQ8TBZ2 947 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 ABHD5Q8WTS1 349 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 SLC25A43Q8WUT9 341 aaPredicted RBP5.88□□□□□ -1.47
RFC4-204ENST00000417876 ASB10Q8WXI3 467 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 GLG1Q92896 1179 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 PTCD3Q96EY7 689 aaKnown RBP5.88□□□□□ -1.47
RFC4-204ENST00000417876 MCRS1Q96EZ8 462 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 ZNF668Q96K58 619 aaPredicted RBP5.88□□□□□ -1.47
RFC4-204ENST00000417876 EIF2AK1Q9BQI3 630 aaKnown RBP5.88□□□□□ -1.47
RFC4-204ENST00000417876 RTKNQ9BST9 563 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 PARPBPQ9NWS1 579 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 SMPD4Q9NXE4 827 aa5.88□□□□□ -1.47
RFC4-204ENST00000417876 DKK3Q9UBP4 350 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms