RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 DUSP9Q99956 384 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-208ENST00000416159 GTPBP4Q9BZE4 634 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-208ENST00000416159 PNPLA8Q9NP80 782 aa18.59■□□□□ 0.57
PDLIM2-208ENST00000416159 SEMA4GQ9NTN9 838 aa18.59■□□□□ 0.57
PDLIM2-208ENST00000416159 POLR3BQ9NW08 1133 aaPredicted RBP18.59■□□□□ 0.57
PDLIM2-208ENST00000416159 EBF1Q9UH73 591 aa18.59■□□□□ 0.57
PDLIM2-208ENST00000416159 CDV3Q9UKY7 258 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-208ENST00000416159 MYO16Q9Y6X6 1858 aa18.58■□□□□ 0.57
PDLIM2-208ENST00000416159 SCAMP3O14828 347 aaKnown RBP18.58■□□□□ 0.56
PDLIM2-208ENST00000416159 TLR5O60602 858 aa18.58■□□□□ 0.56
PDLIM2-208ENST00000416159 SMC2O95347 1197 aa18.58■□□□□ 0.56
PDLIM2-208ENST00000416159 APBB3O95704 486 aa18.58■□□□□ 0.56
PDLIM2-208ENST00000416159 APODP05090 189 aa18.58■□□□□ 0.56
PDLIM2-208ENST00000416159 ADH5P11766 374 aa18.58■□□□□ 0.56
PDLIM2-208ENST00000416159 CD58P19256 250 aa18.58■□□□□ 0.56
PDLIM2-208ENST00000416159 PRCPP42785 496 aa18.58■□□□□ 0.56
PDLIM2-208ENST00000416159 MXI1P50539 228 aa18.58■□□□□ 0.56
PDLIM2-208ENST00000416159 MRPS21P82921 87 aaKnown RBP18.58■□□□□ 0.56
PDLIM2-208ENST00000416159 GAD2Q05329 585 aa18.58■□□□□ 0.56
PDLIM2-208ENST00000416159 ZNF658Q5TYW1 1059 aaPredicted RBP18.58■□□□□ 0.56
PDLIM2-208ENST00000416159 FBXL13Q8NEE6 735 aa18.58■□□□□ 0.56
PDLIM2-208ENST00000416159 ENGASEQ8NFI3 743 aa18.58■□□□□ 0.56
PDLIM2-208ENST00000416159 WHAMMQ8TF30 809 aa18.58■□□□□ 0.56
PDLIM2-208ENST00000416159 TSG101Q99816 390 aa18.58■□□□□ 0.56
PDLIM2-208ENST00000416159 RTKNQ9BST9 563 aa18.58■□□□□ 0.56
PDLIM2-208ENST00000416159 SCML2Q9UQR0 700 aa18.58■□□□□ 0.56
PDLIM2-208ENST00000416159 PCDHA5Q9Y5H7 936 aa18.58■□□□□ 0.56
PDLIM2-208ENST00000416159 A0A0A0MRY4 1105 aa18.57■□□□□ 0.56
PDLIM2-208ENST00000416159 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-208ENST00000416159 HHLA1C9JL84 531 aa18.57■□□□□ 0.56
PDLIM2-208ENST00000416159 ACO1P21399 889 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-208ENST00000416159 SLC6A11P48066 632 aa18.57■□□□□ 0.56
PDLIM2-208ENST00000416159 ATXN1P54253 815 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-208ENST00000416159 SEC13P55735 322 aa18.57■□□□□ 0.56
PDLIM2-208ENST00000416159 FKBP3Q00688 224 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-208ENST00000416159 C2orf27AQ580R0 203 aa18.57■□□□□ 0.56
PDLIM2-208ENST00000416159 LY6G5CQ5SRR4 150 aa18.57■□□□□ 0.56
PDLIM2-208ENST00000416159 PRR23CQ6ZRP0 262 aa18.57■□□□□ 0.56
PDLIM2-208ENST00000416159 SEMA4DQ92854 862 aa18.57■□□□□ 0.56
PDLIM2-208ENST00000416159 TIGD1Q96MW7 591 aa18.57■□□□□ 0.56
PDLIM2-208ENST00000416159 FAM124BQ9H5Z6 455 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-208ENST00000416159 RAB20Q9NX57 234 aa18.57■□□□□ 0.56
PDLIM2-208ENST00000416159 HOOK1Q9UJC3 728 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-208ENST00000416159 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-208ENST00000416159 WDR87Q6ZQQ6 2873 aa18.56■□□□□ 0.56
PDLIM2-208ENST00000416159 KIAA1549LQ6ZVL6 1849 aa18.56■□□□□ 0.56
PDLIM2-208ENST00000416159 KAT7O95251 611 aa18.56■□□□□ 0.56
PDLIM2-208ENST00000416159 ATP5C1P36542 298 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-208ENST00000416159 GRIA2P42262 883 aa18.56■□□□□ 0.56
PDLIM2-208ENST00000416159 HSF5Q4G112 596 aaPredicted RBP18.56■□□□□ 0.56
PDLIM2-208ENST00000416159 PREPLQ4J6C6 727 aaPredicted RBP18.56■□□□□ 0.56
PDLIM2-208ENST00000416159 BTBD8Q5XKL5 378 aa18.56■□□□□ 0.56
PDLIM2-208ENST00000416159 GPRIN1Q7Z2K8 1008 aa18.56■□□□□ 0.56
PDLIM2-208ENST00000416159 KBTBD6Q86V97 674 aa18.56■□□□□ 0.56
PDLIM2-208ENST00000416159 TSTD1Q8NFU3 115 aa18.56■□□□□ 0.56
PDLIM2-208ENST00000416159 SPATA20Q8TB22 786 aa18.56■□□□□ 0.56
PDLIM2-208ENST00000416159 NETO1Q8TDF5 533 aa18.56■□□□□ 0.56
PDLIM2-208ENST00000416159 SMARCE1Q969G3 411 aa18.56■□□□□ 0.56
PDLIM2-208ENST00000416159 EEF2KMTQ96G04 330 aa18.56■□□□□ 0.56
PDLIM2-208ENST00000416159 ZC3H10Q96K80 434 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-208ENST00000416159 HEXIM2Q96MH2 286 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-208ENST00000416159 DUSP16Q9BY84 665 aa18.56■□□□□ 0.56
PDLIM2-208ENST00000416159 CYLDQ9NQC7 956 aa18.56■□□□□ 0.56
PDLIM2-208ENST00000416159 MMP17Q9ULZ9 603 aa18.56■□□□□ 0.56
PDLIM2-208ENST00000416159 EML5Q05BV3 1969 aa18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 SLC16A3O15427 465 aaKnown RBP18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 EPN2O95208 641 aa18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 IRF1P10914 325 aa18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 TNFRSF4P43489 277 aa18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 PGFP49763 221 aa18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 DGKEP52429 567 aa18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 KIF11P52732 1056 aa18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 GOLGA8FQ08AF8 430 aa18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 GOLGA8DPQ0D2H9 430 aa18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 ZNF394Q53GI3 561 aa18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 PPP1R26Q5T8A7 1209 aaPredicted RBP18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 HTR3DQ70Z44 454 aa18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 C12orf40Q86WS4 652 aa18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 BBS7Q8IWZ6 715 aa18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 ZC3H3Q8IXZ2 948 aaKnown RBP18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 CCDC33Q8N5R6 958 aa18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 JAKMIP2Q96AA8 810 aa18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 KLF16Q9BXK1 252 aaPredicted RBP18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 ARRDC1-AS1Q9H2J1 176 aa18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 ARHGEF4Q9NR80 690 aa18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 SPHK2Q9NRA0 654 aa18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 LSM7Q9UK45 103 aaKnown RBP18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 PCDHGA5Q9Y5G8 931 aa18.55■□□□□ 0.56
PDLIM2-208ENST00000416159 MYO18AQ92614 2054 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-208ENST00000416159 HOXC11O43248 304 aaPredicted RBP18.54■□□□□ 0.56
PDLIM2-208ENST00000416159 RHOBTB1O94844 696 aa18.54■□□□□ 0.56
PDLIM2-208ENST00000416159 TBX18O95935 607 aa18.54■□□□□ 0.56
PDLIM2-208ENST00000416159 PSEN1P49768 467 aa18.54■□□□□ 0.56
PDLIM2-208ENST00000416159 LRRC63Q05C16 580 aa18.54■□□□□ 0.56
PDLIM2-208ENST00000416159 CRY1Q16526 586 aa18.54■□□□□ 0.56
PDLIM2-208ENST00000416159 PLK5Q496M5 336 aa18.54■□□□□ 0.56
PDLIM2-208ENST00000416159 TCERG1LQ5VWI1 586 aa18.54■□□□□ 0.56
PDLIM2-208ENST00000416159 ANKRD40Q6AI12 368 aa18.54■□□□□ 0.56
PDLIM2-208ENST00000416159 KLHDC10Q6PID8 442 aa18.54■□□□□ 0.56
PDLIM2-208ENST00000416159 NUDT18Q6ZVK8 323 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms