RNA–Protein interactions for RNA: ENST00000415944.3

MECP2-204, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-204ENST00000415944 MFSD7Q6UXD7 560 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 ALKAL1Q6UXT8 129 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 CCDC121Q6ZUS5 278 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 CYS1Q717R9 158 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 SLC26A9Q7LBE3 791 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 STRADAQ7RTN6 431 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 ZDHHC14Q8IZN3 488 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 TMEM199Q8N511 208 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 WDTC1Q8N5D0 677 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 ANKRD52Q8NB46 1076 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 ZNF473Q8WTR7 871 aaKnown RBP9.04□□□□□ -0.96
MECP2-204ENST00000415944 TMEM40Q8WWA1 233 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 RSPH1Q8WYR4 309 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 TFAP2BQ92481 460 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 BADQ92934 168 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 ARHGEF2Q92974 986 aaKnown RBP9.04□□□□□ -0.96
MECP2-204ENST00000415944 RTP4Q96DX8 246 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 SCLYQ96I15 445 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 CABS1Q96KC9 395 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 PPP1R16BQ96T49 567 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 SLC9A7Q96T83 725 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 OSMRQ99650 979 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 OSBPL7Q9BZF2 842 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 BRD8Q9H0E9 1235 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 EPB41L4BQ9H329 900 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 KDM4CQ9H3R0 1056 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 MINDY3Q9H8M7 445 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 CDHR5Q9HBB8 845 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 USP18Q9UMW8 372 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 USTQ9Y2C2 406 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 RALGAPA2Q2PPJ7 1873 aa9.04□□□□□ -0.96
MECP2-204ENST00000415944 BCLAF3A2AJT9 711 aaKnown RBP9.03□□□□□ -0.96
MECP2-204ENST00000415944 F8VP50 259 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 SGK1O00141 431 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 TRDMT1O14717 391 aaKnown RBP9.03□□□□□ -0.96
MECP2-204ENST00000415944 PRPF4O43172 522 aaKnown RBP eCLIP9.03□□□□□ -0.96
MECP2-204ENST00000415944 B4GALT5O43286 388 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 HUS1O60921 280 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 STK10O94804 968 aaKnown RBP9.03□□□□□ -0.96
MECP2-204ENST00000415944 TRUB2O95900 331 aaKnown RBP9.03□□□□□ -0.96
MECP2-204ENST00000415944 CSF2RAP15509 400 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 PDGFRAP16234 1089 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 DNAJB2P25686 324 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 LRPAP1P30533 357 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 RFC1P35251 1148 aaPredicted RBP9.03□□□□□ -0.96
MECP2-204ENST00000415944 MAGEA6P43360 314 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 KCNJ1P48048 391 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 LHX1P48742 406 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 ATP1A2P50993 1020 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 RAB27AP51159 221 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 ARSEP51690 589 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 NDST1P52848 882 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 GUCY1A3Q02108 690 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 FPGSQ05932 587 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 ILF2Q12905 390 aaKnown RBP9.03□□□□□ -0.96
MECP2-204ENST00000415944 LPIN1Q14693 890 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 HIF1AQ16665 826 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 P3H1Q32P28 736 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 PKDCCQ504Y2 493 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 PLEKHG4Q58EX7 1191 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 SPDYAQ5MJ70 313 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 FAM102AQ5T9C2 384 aaPredicted RBP9.03□□□□□ -0.96
MECP2-204ENST00000415944 RNASEH2BQ5TBB1 312 aaKnown RBP9.03□□□□□ -0.96
MECP2-204ENST00000415944 RGS9BPQ6ZS82 235 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 LIMS2Q7Z4I7 341 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 FAM228AQ86W67 206 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 CCDC25Q86WR0 208 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 CDKL3Q8IVW4 592 aaPredicted RBP9.03□□□□□ -0.96
MECP2-204ENST00000415944 SH2D3CQ8N5H7 860 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 CCDC197Q8NCU1 140 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 MCUQ8NE86 351 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 DYDC1Q8WWB3 177 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 C18orf25Q96B23 403 aaPredicted RBP9.03□□□□□ -0.96
MECP2-204ENST00000415944 PPP1R2P1Q96PQ5 205 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 CPXM1Q96SM3 734 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 NAT9Q9BTE0 207 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 KLC2Q9H0B6 622 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 SNX25Q9H3E2 840 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 IL23AQ9NPF7 189 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 PCDH10Q9P2E7 1040 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 TSPAN16Q9UKR8 245 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 STAP1Q9ULZ2 295 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 FAM169AQ9Y6X4 670 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 CITO14578 2027 aa9.03□□□□□ -0.96
MECP2-204ENST00000415944 EXOC1LA0A1B0GW35 172 aa9.02□□□□□ -0.97
MECP2-204ENST00000415944 TCRBV7S2A1N4TA0A589 114 aa9.02□□□□□ -0.97
MECP2-204ENST00000415944 TLDC2A0PJX2 215 aa9.02□□□□□ -0.97
MECP2-204ENST00000415944 C3orf70A6NLC5 250 aaPredicted RBP9.02□□□□□ -0.97
MECP2-204ENST00000415944 PIRO00625 290 aa9.02□□□□□ -0.97
MECP2-204ENST00000415944 NCAM2O15394 837 aa9.02□□□□□ -0.97
MECP2-204ENST00000415944 MTSS1O43312 755 aa9.02□□□□□ -0.97
MECP2-204ENST00000415944 CST8O60676 142 aa9.02□□□□□ -0.97
MECP2-204ENST00000415944 ATP5HO75947 161 aa9.02□□□□□ -0.97
MECP2-204ENST00000415944 SUN1O94901 812 aa9.02□□□□□ -0.97
MECP2-204ENST00000415944 FSBPO95073 299 aa9.02□□□□□ -0.97
MECP2-204ENST00000415944 ATP5BP06576 529 aaKnown RBP9.02□□□□□ -0.97
MECP2-204ENST00000415944 WARSP23381 471 aaKnown RBP9.02□□□□□ -0.97
MECP2-204ENST00000415944 CNTFP26441 200 aa9.02□□□□□ -0.97
MECP2-204ENST00000415944 MIPP30301 263 aa9.02□□□□□ -0.97
MECP2-204ENST00000415944 STX2P32856 288 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms