RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 CCDC17Q96LX7 622 aa6.36□□□□□ -1.39
ATG4C-204ENST00000414558 ZCWPW1Q9H0M4 648 aa6.36□□□□□ -1.39
ATG4C-204ENST00000414558 PDGFCQ9NRA1 345 aa6.36□□□□□ -1.39
ATG4C-204ENST00000414558 OBP2AQ9NY56 170 aa6.36□□□□□ -1.39
ATG4C-204ENST00000414558 KCNU1A8MYU2 1149 aa6.35□□□□□ -1.39
ATG4C-204ENST00000414558 TP73O15350 636 aa6.35□□□□□ -1.39
ATG4C-204ENST00000414558 MT-CO3P00414 261 aa6.35□□□□□ -1.39
ATG4C-204ENST00000414558 CD19P15391 556 aa6.35□□□□□ -1.39
ATG4C-204ENST00000414558 RHCEP18577 417 aa6.35□□□□□ -1.39
ATG4C-204ENST00000414558 IL1R2P27930 398 aa6.35□□□□□ -1.39
ATG4C-204ENST00000414558 ARHGAP25P42331 645 aa6.35□□□□□ -1.39
ATG4C-204ENST00000414558 CARSP49589 748 aaKnown RBP6.35□□□□□ -1.39
ATG4C-204ENST00000414558 DIO1P49895 249 aa6.35□□□□□ -1.39
ATG4C-204ENST00000414558 COPB1P53618 953 aaKnown RBP6.35□□□□□ -1.39
ATG4C-204ENST00000414558 RHDQ02161 417 aa6.35□□□□□ -1.39
ATG4C-204ENST00000414558 STK3Q13188 491 aa6.35□□□□□ -1.39
ATG4C-204ENST00000414558 ETFDHQ16134 617 aa6.35□□□□□ -1.39
ATG4C-204ENST00000414558 MZT2AQ6P582 158 aa6.35□□□□□ -1.39
ATG4C-204ENST00000414558 SLC2A7Q6PXP3 512 aa6.35□□□□□ -1.39
ATG4C-204ENST00000414558 ZNF813Q6ZN06 617 aa6.35□□□□□ -1.39
ATG4C-204ENST00000414558 UNC13DQ70J99 1090 aa6.35□□□□□ -1.39
ATG4C-204ENST00000414558 GLCCI1Q86VQ1 547 aa6.35□□□□□ -1.39
ATG4C-204ENST00000414558 SDR16C5Q8N3Y7 309 aa6.35□□□□□ -1.39
ATG4C-204ENST00000414558 TTC8Q8TAM2 541 aa6.35□□□□□ -1.39
ATG4C-204ENST00000414558 FAM118BQ9BPY3 351 aa6.35□□□□□ -1.39
ATG4C-204ENST00000414558 BTBD1Q9H0C5 482 aa6.35□□□□□ -1.39
ATG4C-204ENST00000414558 MGAT4CQ9UBM8 478 aa6.35□□□□□ -1.39
ATG4C-204ENST00000414558 EXOC5O00471 708 aa6.34□□□□□ -1.39
ATG4C-204ENST00000414558 SPRY2O43597 315 aa6.34□□□□□ -1.39
ATG4C-204ENST00000414558 BCAR3O75815 825 aa6.34□□□□□ -1.39
ATG4C-204ENST00000414558 RNF8O76064 485 aa6.34□□□□□ -1.39
ATG4C-204ENST00000414558 PARP1P09874 1014 aaKnown RBP6.34□□□□□ -1.39
ATG4C-204ENST00000414558 ATF3P18847 181 aa6.34□□□□□ -1.39
ATG4C-204ENST00000414558 BTF3P20290 206 aaKnown RBP6.34□□□□□ -1.39
ATG4C-204ENST00000414558 MMP13P45452 471 aa6.34□□□□□ -1.39
ATG4C-204ENST00000414558 SEMA5AQ13591 1074 aa6.34□□□□□ -1.39
ATG4C-204ENST00000414558 ZNF268Q14587 947 aaPredicted RBP6.34□□□□□ -1.39
ATG4C-204ENST00000414558 DAZAP2Q15038 168 aaPredicted RBP6.34□□□□□ -1.39
ATG4C-204ENST00000414558 STRBPQ96SI9 672 aaKnown RBP6.34□□□□□ -1.39
ATG4C-204ENST00000414558 DKK4Q9UBT3 224 aa6.34□□□□□ -1.39
ATG4C-204ENST00000414558 LPAR3Q9UBY5 353 aa6.34□□□□□ -1.39
ATG4C-204ENST00000414558 NKX1-2Q9UD57 310 aaPredicted RBP6.34□□□□□ -1.39
ATG4C-204ENST00000414558 SNX2O60749 519 aa6.33□□□□□ -1.4
ATG4C-204ENST00000414558 APEHP13798 732 aaKnown RBP6.33□□□□□ -1.4
ATG4C-204ENST00000414558 LARS2Q15031 903 aaKnown RBP6.33□□□□□ -1.4
ATG4C-204ENST00000414558 ST3GAL2Q16842 350 aa6.33□□□□□ -1.4
ATG4C-204ENST00000414558 PLAG1Q6DJT9 500 aa6.33□□□□□ -1.4
ATG4C-204ENST00000414558 TMEM65Q6PI78 240 aa6.33□□□□□ -1.4
ATG4C-204ENST00000414558 C14orf80Q86SX3 495 aa6.33□□□□□ -1.4
ATG4C-204ENST00000414558 LINC01465Q8N7H1 131 aa6.33□□□□□ -1.4
ATG4C-204ENST00000414558 WDYHV1Q96HA8 205 aa6.33□□□□□ -1.4
ATG4C-204ENST00000414558 SNX22Q96L94 193 aa6.33□□□□□ -1.4
ATG4C-204ENST00000414558 EFHD1Q9BUP0 239 aa6.33□□□□□ -1.4
ATG4C-204ENST00000414558 NUP62CLQ9H1M0 184 aa6.33□□□□□ -1.4
ATG4C-204ENST00000414558 TUBA8Q9NY65 449 aaPredicted RBP6.33□□□□□ -1.4
ATG4C-204ENST00000414558 DNAJB11Q9UBS4 358 aa6.33□□□□□ -1.4
ATG4C-204ENST00000414558 ZNF212Q9UDV6 495 aa6.33□□□□□ -1.4
ATG4C-204ENST00000414558 STEAP1Q9UHE8 339 aa6.33□□□□□ -1.4
ATG4C-204ENST00000414558 RIMKLBQ9ULI2 386 aa6.33□□□□□ -1.4
ATG4C-204ENST00000414558 SCAF8Q9UPN6 1271 aaKnown RBP6.33□□□□□ -1.4
ATG4C-204ENST00000414558 A8MVJ9 347 aa6.32□□□□□ -1.4
ATG4C-204ENST00000414558 FOXN3O00409 490 aaPredicted RBP6.32□□□□□ -1.4
ATG4C-204ENST00000414558 DSCR3O14972 297 aa6.32□□□□□ -1.4
ATG4C-204ENST00000414558 MOSPD3O75425 235 aa6.32□□□□□ -1.4
ATG4C-204ENST00000414558 MT-ND5P03915 603 aa6.32□□□□□ -1.4
ATG4C-204ENST00000414558 A1BGP04217 495 aa6.32□□□□□ -1.4
ATG4C-204ENST00000414558 SFPQP23246 707 aaKnown RBP eCLIP6.32□□□□□ -1.4
ATG4C-204ENST00000414558 TRIP6Q15654 476 aaKnown RBP6.32□□□□□ -1.4
ATG4C-204ENST00000414558 PRSS3P2Q8NHM4 247 aa6.32□□□□□ -1.4
ATG4C-204ENST00000414558 HS6ST2Q96MM7 605 aa6.32□□□□□ -1.4
ATG4C-204ENST00000414558 HIST1H2AAQ96QV6 131 aa6.32□□□□□ -1.4
ATG4C-204ENST00000414558 GAR1Q9NY12 217 aaKnown RBP6.32□□□□□ -1.4
ATG4C-204ENST00000414558 KLHL13Q9P2N7 655 aa6.32□□□□□ -1.4
ATG4C-204ENST00000414558 CAPN11Q9UMQ6 739 aa6.32□□□□□ -1.4
ATG4C-204ENST00000414558 E5RJQ4 531 aa6.31□□□□□ -1.4
ATG4C-204ENST00000414558 AGPSO00116 658 aa6.31□□□□□ -1.4
ATG4C-204ENST00000414558 TOP3BO95985 862 aaKnown RBP6.31□□□□□ -1.4
ATG4C-204ENST00000414558 MEX3CQ5U5Q3 659 aaKnown RBP6.31□□□□□ -1.4
ATG4C-204ENST00000414558 CYB5RLQ6IPT4 315 aa6.31□□□□□ -1.4
ATG4C-204ENST00000414558 VSTM1Q6UX27 236 aa6.31□□□□□ -1.4
ATG4C-204ENST00000414558 DCDC5Q6ZRR9 648 aa6.31□□□□□ -1.4
ATG4C-204ENST00000414558 WDR75Q8IWA0 830 aaKnown RBP6.31□□□□□ -1.4
ATG4C-204ENST00000414558 MAFAQ8NHW3 353 aaPredicted RBP6.31□□□□□ -1.4
ATG4C-204ENST00000414558 ZNF398Q8TD17 642 aa6.31□□□□□ -1.4
ATG4C-204ENST00000414558 TTC17Q96AE7 1141 aa6.31□□□□□ -1.4
ATG4C-204ENST00000414558 ZDHHC12Q96GR4 267 aa6.31□□□□□ -1.4
ATG4C-204ENST00000414558 VPS50Q96JG6 964 aa6.31□□□□□ -1.4
ATG4C-204ENST00000414558 FCRL4Q96PJ5 515 aa6.31□□□□□ -1.4
ATG4C-204ENST00000414558 BRIP1Q9BX63 1249 aa6.31□□□□□ -1.4
ATG4C-204ENST00000414558 UNKQ9C0B0 810 aaKnown RBP6.31□□□□□ -1.4
ATG4C-204ENST00000414558 VPS16Q9H269 839 aa6.31□□□□□ -1.4
ATG4C-204ENST00000414558 METTL14Q9HCE5 456 aaKnown RBP6.31□□□□□ -1.4
ATG4C-204ENST00000414558 MAFFQ9ULX9 164 aa6.31□□□□□ -1.4
ATG4C-204ENST00000414558 PCDHGB6Q9Y5F9 930 aa6.31□□□□□ -1.4
ATG4C-204ENST00000414558 ZNF521Q96K83 1311 aa6.3□□□□□ -1.4
ATG4C-204ENST00000414558 H3BNC9 293 aa6.3□□□□□ -1.4
ATG4C-204ENST00000414558 PPEF2O14830 753 aa6.3□□□□□ -1.4
ATG4C-204ENST00000414558 ANXA2P07355 339 aaKnown RBP6.3□□□□□ -1.4
ATG4C-204ENST00000414558 ATP5F1P24539 256 aaPredicted RBP6.3□□□□□ -1.4
ATG4C-204ENST00000414558 RBL1P28749 1068 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms