RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 MYH10P35580 1976 aa15.59■□□□□ 0.09
CBX3-203ENST00000409747 EML5Q05BV3 1969 aa15.59■□□□□ 0.09
CBX3-203ENST00000409747 RHOBTB1O94844 696 aa15.59■□□□□ 0.09
CBX3-203ENST00000409747 TRIM49P0CI25 452 aa15.59■□□□□ 0.09
CBX3-203ENST00000409747 TRIM49CP0CI26 452 aa15.59■□□□□ 0.09
CBX3-203ENST00000409747 GAD2Q05329 585 aa15.59■□□□□ 0.09
CBX3-203ENST00000409747 ORC1Q13415 861 aa15.59■□□□□ 0.09
CBX3-203ENST00000409747 EDRF1Q3B7T1 1238 aa15.59■□□□□ 0.09
CBX3-203ENST00000409747 AASDHQ4L235 1098 aaPredicted RBP15.59■□□□□ 0.09
CBX3-203ENST00000409747 BTBD8Q5XKL5 378 aa15.59■□□□□ 0.09
CBX3-203ENST00000409747 RHBDF2Q6PJF5 856 aa15.59■□□□□ 0.09
CBX3-203ENST00000409747 TTC39CQ8N584 583 aa15.59■□□□□ 0.09
CBX3-203ENST00000409747 C12orf29Q8N999 325 aa15.59■□□□□ 0.09
CBX3-203ENST00000409747 ZMIZ2Q8NF64 920 aa15.59■□□□□ 0.09
CBX3-203ENST00000409747 DDX1Q92499 740 aaKnown RBP15.59■□□□□ 0.09
CBX3-203ENST00000409747 FAXDC2Q96IV6 333 aa15.59■□□□□ 0.09
CBX3-203ENST00000409747 HNRNPABQ99729 332 aaKnown RBP15.59■□□□□ 0.09
CBX3-203ENST00000409747 GOLPH3LQ9H4A5 285 aa15.59■□□□□ 0.09
CBX3-203ENST00000409747 POLR3BQ9NW08 1133 aaPredicted RBP15.59■□□□□ 0.09
CBX3-203ENST00000409747 RMND1Q9NWS8 449 aa15.59■□□□□ 0.09
CBX3-203ENST00000409747 PCDHA5Q9Y5H7 936 aa15.59■□□□□ 0.09
CBX3-203ENST00000409747 SCAMP3O14828 347 aaKnown RBP15.58■□□□□ 0.08
CBX3-203ENST00000409747 STX10O60499 249 aa15.58■□□□□ 0.08
CBX3-203ENST00000409747 TLR5O60602 858 aa15.58■□□□□ 0.08
CBX3-203ENST00000409747 ALDH1A2O94788 518 aa15.58■□□□□ 0.08
CBX3-203ENST00000409747 KAT7O95251 611 aa15.58■□□□□ 0.08
CBX3-203ENST00000409747 ZNF806P0C7X5 589 aa15.58■□□□□ 0.08
CBX3-203ENST00000409747 ADORA2BP29275 332 aa15.58■□□□□ 0.08
CBX3-203ENST00000409747 GRIA2P42262 883 aa15.58■□□□□ 0.08
CBX3-203ENST00000409747 DGKEP52429 567 aa15.58■□□□□ 0.08
CBX3-203ENST00000409747 PLK5Q496M5 336 aa15.58■□□□□ 0.08
CBX3-203ENST00000409747 ZCWPW2Q504Y3 356 aa15.58■□□□□ 0.08
CBX3-203ENST00000409747 USP39Q53GS9 565 aaKnown RBP15.58■□□□□ 0.08
CBX3-203ENST00000409747 KRT39Q6A163 491 aa15.58■□□□□ 0.08
CBX3-203ENST00000409747 NUDT18Q6ZVK8 323 aa15.58■□□□□ 0.08
CBX3-203ENST00000409747 TAS1R2Q8TE23 839 aa15.58■□□□□ 0.08
CBX3-203ENST00000409747 ARHGEF4Q9NR80 690 aa15.58■□□□□ 0.08
CBX3-203ENST00000409747 HOXC11O43248 304 aaPredicted RBP15.57■□□□□ 0.08
CBX3-203ENST00000409747 BEST1O76090 585 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 EPB41P11171 864 aaKnown RBP15.57■□□□□ 0.08
CBX3-203ENST00000409747 TNFRSF4P43489 277 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 LIMK1P53667 647 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 PPP3CAQ08209 521 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 LY6G5CQ5SRR4 150 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 CLEC20AQ6ZU45 233 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 RASSF3Q86WH2 238 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 CYFIP2Q96F07 1278 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 CNOT6LQ96LI5 555 aaKnown RBP15.57■□□□□ 0.08
CBX3-203ENST00000409747 FAM124BQ9H5Z6 455 aaPredicted RBP15.57■□□□□ 0.08
CBX3-203ENST00000409747 MMRN2Q9H8L6 949 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 VPS45Q9NRW7 570 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 LSM7Q9UK45 103 aaKnown RBP15.57■□□□□ 0.08
CBX3-203ENST00000409747 SCML2Q9UQR0 700 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 A0A0A0MRY4 1105 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 DCDC2BA2VCK2 349 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 CETN3O15182 167 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 CILPO75339 1184 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 CD58P19256 250 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 ATP5C1P36542 298 aaKnown RBP15.57■□□□□ 0.08
CBX3-203ENST00000409747 MPLP40238 635 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 CRY1Q16526 586 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 EOGTQ5NDL2 527 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 TADA2BQ86TJ2 420 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 DUSP15Q9H1R2 295 aaPredicted RBP15.57■□□□□ 0.08
CBX3-203ENST00000409747 APOBEC3GQ9HC16 384 aaKnown RBP15.57■□□□□ 0.08
CBX3-203ENST00000409747 CYLDQ9NQC7 956 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.57■□□□□ 0.087e-6■■■■■ 53.1
CBX3-203ENST00000409747 SPHK2Q9NRA0 654 aa15.57■□□□□ 0.08
CBX3-203ENST00000409747 GOLGA6L4A6NEF3 574 aa15.56■□□□□ 0.08
CBX3-203ENST00000409747 IRF1P10914 325 aa15.56■□□□□ 0.08
CBX3-203ENST00000409747 GBP1P32455 592 aa15.56■□□□□ 0.08
CBX3-203ENST00000409747 SLC6A11P48066 632 aa15.56■□□□□ 0.08
CBX3-203ENST00000409747 PSEN1P49768 467 aa15.56■□□□□ 0.08
CBX3-203ENST00000409747 MXI1P50539 228 aa15.56■□□□□ 0.08
CBX3-203ENST00000409747 MCCD1P59942 119 aaPredicted RBP15.56■□□□□ 0.08
CBX3-203ENST00000409747 KDSRQ06136 332 aa15.56■□□□□ 0.08
CBX3-203ENST00000409747 PLA2G2CQ5R387 149 aa15.56■□□□□ 0.08
CBX3-203ENST00000409747 IL31Q6EBC2 164 aa15.56■□□□□ 0.08
CBX3-203ENST00000409747 ANO7Q6IWH7 933 aa15.56■□□□□ 0.08
CBX3-203ENST00000409747 KLHDC10Q6PID8 442 aa15.56■□□□□ 0.08
CBX3-203ENST00000409747 TRMT11Q7Z4G4 463 aaKnown RBP15.56■□□□□ 0.08
CBX3-203ENST00000409747 C12orf40Q86WS4 652 aa15.56■□□□□ 0.08
CBX3-203ENST00000409747 BBS7Q8IWZ6 715 aa15.56■□□□□ 0.08
CBX3-203ENST00000409747 CCDC33Q8N5R6 958 aa15.56■□□□□ 0.08
CBX3-203ENST00000409747 FBXL13Q8NEE6 735 aa15.56■□□□□ 0.08
CBX3-203ENST00000409747 KCNV2Q8TDN2 545 aa15.56■□□□□ 0.08
CBX3-203ENST00000409747 TWNKQ96RR1 684 aa15.56■□□□□ 0.08
CBX3-203ENST00000409747 GTPBP4Q9BZE4 634 aaKnown RBP15.56■□□□□ 0.08
CBX3-203ENST00000409747 GDPD2Q9HCC8 539 aa15.56■□□□□ 0.08
CBX3-203ENST00000409747 POLMQ9NP87 494 aaPredicted RBP15.56■□□□□ 0.08
CBX3-203ENST00000409747 DEC1Q9P2X7 70 aa15.56■□□□□ 0.08
CBX3-203ENST00000409747 CYP26A1O43174 497 aa15.55■□□□□ 0.08
CBX3-203ENST00000409747 GDF9O60383 454 aa15.55■□□□□ 0.08
CBX3-203ENST00000409747 ACO1P21399 889 aaKnown RBP15.55■□□□□ 0.08
CBX3-203ENST00000409747 BECN1Q14457 450 aa15.55■□□□□ 0.08
CBX3-203ENST00000409747 SF3A2Q15428 464 aaKnown RBP15.55■□□□□ 0.08
CBX3-203ENST00000409747 ANO4Q32M45 955 aa15.55■□□□□ 0.08
CBX3-203ENST00000409747 HTR3DQ70Z44 454 aa15.55■□□□□ 0.08
CBX3-203ENST00000409747 ETFBKMTQ8IXQ9 262 aa15.55■□□□□ 0.08
CBX3-203ENST00000409747 ALLCQ8N6M5 410 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms