RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 LONP2Q86WA8 852 aa20.7■□□□□ 0.9
TSPAN4-209ENST00000409543 EZH1Q92800 747 aaPredicted RBP20.7■□□□□ 0.9
TSPAN4-209ENST00000409543 JAKMIP2Q96AA8 810 aa20.7■□□□□ 0.9
TSPAN4-209ENST00000409543 NACA2Q9H009 215 aa20.7■□□□□ 0.9
TSPAN4-209ENST00000409543 CYLDQ9NQC7 956 aa20.7■□□□□ 0.9
TSPAN4-209ENST00000409543 SMG5Q9UPR3 1016 aaKnown RBP20.7■□□□□ 0.9
TSPAN4-209ENST00000409543 FRYLO94915 3013 aa20.7■□□□□ 0.9
TSPAN4-209ENST00000409543 CNR2P34972 360 aa20.69■□□□□ 0.9
TSPAN4-209ENST00000409543 OPRD1P41143 372 aa20.69■□□□□ 0.9
TSPAN4-209ENST00000409543 FMO5P49326 533 aa20.69■□□□□ 0.9
TSPAN4-209ENST00000409543 FNTBP49356 437 aa20.69■□□□□ 0.9
TSPAN4-209ENST00000409543 KIF11P52732 1056 aa20.69■□□□□ 0.9
TSPAN4-209ENST00000409543 DMWDQ09019 674 aa20.69■□□□□ 0.9
TSPAN4-209ENST00000409543 GAB4Q2WGN9 574 aa20.69■□□□□ 0.9
TSPAN4-209ENST00000409543 CCDC40Q4G0X9 1142 aa20.69■□□□□ 0.9
TSPAN4-209ENST00000409543 RHBDF2Q6PJF5 856 aa20.69■□□□□ 0.9
TSPAN4-209ENST00000409543 OTUB2Q96DC9 234 aa20.69■□□□□ 0.9
TSPAN4-209ENST00000409543 HINFPQ9BQA5 517 aa20.69■□□□□ 0.9
TSPAN4-209ENST00000409543 UBXN6Q9BZV1 441 aa20.69■□□□□ 0.9
TSPAN4-209ENST00000409543 SH3BP1Q9Y3L3 701 aa20.69■□□□□ 0.9
TSPAN4-209ENST00000409543 SCAMP3O14828 347 aaKnown RBP20.68■□□□□ 0.9
TSPAN4-209ENST00000409543 CYP26A1O43174 497 aa20.68■□□□□ 0.9
TSPAN4-209ENST00000409543 ATP5C1P36542 298 aaKnown RBP20.68■□□□□ 0.9
TSPAN4-209ENST00000409543 YWHAEP62258 255 aaKnown RBP20.68■□□□□ 0.9
TSPAN4-209ENST00000409543 TRIML1Q8N9V2 468 aa20.68■□□□□ 0.9
TSPAN4-209ENST00000409543 CCDC26Q8TAB7 109 aa20.68■□□□□ 0.9
TSPAN4-209ENST00000409543 OSER1Q9NX31 292 aa20.68■□□□□ 0.9
TSPAN4-209ENST00000409543 NCDNQ9UBB6 729 aa20.68■□□□□ 0.9
TSPAN4-209ENST00000409543 CTNND2Q9UQB3 1225 aa20.68■□□□□ 0.9
TSPAN4-209ENST00000409543 USP3Q9Y6I4 520 aa20.68■□□□□ 0.9
TSPAN4-209ENST00000409543 ATG2BQ96BY7 2078 aa20.67■□□□□ 0.9
TSPAN4-209ENST00000409543 HRO43593 1189 aa20.67■□□□□ 0.9
TSPAN4-209ENST00000409543 ADH1CP00326 375 aa20.67■□□□□ 0.9
TSPAN4-209ENST00000409543 TBXAS1P24557 533 aaPredicted RBP20.67■□□□□ 0.9
TSPAN4-209ENST00000409543 PSEN1P49768 467 aa20.67■□□□□ 0.9
TSPAN4-209ENST00000409543 HEATR6Q6AI08 1181 aaKnown RBP20.67■□□□□ 0.9
TSPAN4-209ENST00000409543 KLHDC10Q6PID8 442 aa20.67■□□□□ 0.9
TSPAN4-209ENST00000409543 CCDC186Q7Z3E2 898 aa20.67■□□□□ 0.9
TSPAN4-209ENST00000409543 DCLK2Q8N568 766 aa20.67■□□□□ 0.9
TSPAN4-209ENST00000409543 ANKRD52Q8NB46 1076 aa20.67■□□□□ 0.9
TSPAN4-209ENST00000409543 SECISBP2LQ93073 1101 aaKnown RBP20.67■□□□□ 0.9
TSPAN4-209ENST00000409543 KLF16Q9BXK1 252 aaPredicted RBP20.67■□□□□ 0.9
TSPAN4-209ENST00000409543 NMUR1Q9HB89 426 aa20.67■□□□□ 0.9
TSPAN4-209ENST00000409543 SLC8A2Q9UPR5 921 aa20.67■□□□□ 0.9
TSPAN4-209ENST00000409543 SPTBN4Q9H254 2564 aa20.67■□□□□ 0.9
TSPAN4-209ENST00000409543 MYO16Q9Y6X6 1858 aa20.67■□□□□ 0.9
TSPAN4-209ENST00000409543 CCDC163A0A0D9SF12 145 aa20.66■□□□□ 0.9
TSPAN4-209ENST00000409543 A0A1W2PQH9 124 aa20.66■□□□□ 0.9
TSPAN4-209ENST00000409543 P4HA2O15460 535 aa20.66■□□□□ 0.9
TSPAN4-209ENST00000409543 GNA14O95837 355 aa20.66■□□□□ 0.9
TSPAN4-209ENST00000409543 TBX18O95935 607 aa20.66■□□□□ 0.9
TSPAN4-209ENST00000409543 RARGP13631 454 aa20.66■□□□□ 0.9
TSPAN4-209ENST00000409543 EIF2DP41214 584 aaKnown RBP20.66■□□□□ 0.9
TSPAN4-209ENST00000409543 SLC8A3P57103 927 aa20.66■□□□□ 0.9
TSPAN4-209ENST00000409543 LRMPQ12912 555 aa20.66■□□□□ 0.9
TSPAN4-209ENST00000409543 PAK1Q13153 545 aa20.66■□□□□ 0.9
TSPAN4-209ENST00000409543 WDR5BQ86VZ2 330 aa20.66■□□□□ 0.9
TSPAN4-209ENST00000409543 ZNF276Q8N554 614 aa20.66■□□□□ 0.9
TSPAN4-209ENST00000409543 UBR7Q8N806 425 aa20.66■□□□□ 0.9
TSPAN4-209ENST00000409543 RPLP0P6Q8NHW5 317 aa20.66■□□□□ 0.9
TSPAN4-209ENST00000409543 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.66■□□□□ 0.9
TSPAN4-209ENST00000409543 KIAA1468Q9P260 1216 aa20.66■□□□□ 0.9
TSPAN4-209ENST00000409543 RAB23Q9ULC3 237 aa20.66■□□□□ 0.9
TSPAN4-209ENST00000409543 ADH5P11766 374 aa20.65■□□□□ 0.9
TSPAN4-209ENST00000409543 HOXC13P31276 330 aa20.65■□□□□ 0.9
TSPAN4-209ENST00000409543 MARSP56192 900 aaKnown RBP20.65■□□□□ 0.9
TSPAN4-209ENST00000409543 STX17P56962 302 aa20.65■□□□□ 0.9
TSPAN4-209ENST00000409543 CETN1Q12798 172 aa20.65■□□□□ 0.9
TSPAN4-209ENST00000409543 LY6G5CQ5SRR4 150 aa20.65■□□□□ 0.9
TSPAN4-209ENST00000409543 HTR3DQ70Z44 454 aa20.65■□□□□ 0.9
TSPAN4-209ENST00000409543 SYT13Q7L8C5 426 aa20.65■□□□□ 0.9
TSPAN4-209ENST00000409543 SCD5Q86SK9 330 aa20.65■□□□□ 0.9
TSPAN4-209ENST00000409543 TADA2BQ86TJ2 420 aa20.65■□□□□ 0.9
TSPAN4-209ENST00000409543 TRIM59Q8IWR1 403 aa20.65■□□□□ 0.9
TSPAN4-209ENST00000409543 BBS7Q8IWZ6 715 aa20.65■□□□□ 0.9
TSPAN4-209ENST00000409543 CAMKK1Q8N5S9 505 aa20.65■□□□□ 0.9
TSPAN4-209ENST00000409543 WBP2Q969T9 261 aa20.65■□□□□ 0.9
TSPAN4-209ENST00000409543 ACDQ96AP0 544 aa20.65■□□□□ 0.9
TSPAN4-209ENST00000409543 NT5C1BQ96P26 610 aa20.65■□□□□ 0.9
TSPAN4-209ENST00000409543 CLIC5Q9NZA1 410 aa20.65■□□□□ 0.9
TSPAN4-209ENST00000409543 NAGPAQ9UK23 515 aa20.65■□□□□ 0.9
TSPAN4-209ENST00000409543 KIAA1257Q9ULG3 409 aa20.65■□□□□ 0.9
TSPAN4-209ENST00000409543 K7EQS6 105 aa20.64■□□□□ 0.89
TSPAN4-209ENST00000409543 GREM1O60565 184 aa20.64■□□□□ 0.89
TSPAN4-209ENST00000409543 IRF1P10914 325 aa20.64■□□□□ 0.89
TSPAN4-209ENST00000409543 SLC6A11P48066 632 aa20.64■□□□□ 0.89
TSPAN4-209ENST00000409543 GAD2Q05329 585 aa20.64■□□□□ 0.89
TSPAN4-209ENST00000409543 GOLGA8FQ08AF8 430 aa20.64■□□□□ 0.89
TSPAN4-209ENST00000409543 GOLGA8DPQ0D2H9 430 aa20.64■□□□□ 0.89
TSPAN4-209ENST00000409543 SIM2Q14190 667 aaPredicted RBP20.64■□□□□ 0.89
TSPAN4-209ENST00000409543 SGO2Q562F6 1265 aa20.64■□□□□ 0.89
TSPAN4-209ENST00000409543 RAB41Q5JT25 222 aa20.64■□□□□ 0.89
TSPAN4-209ENST00000409543 LAIR1Q6GTX8 287 aa20.64■□□□□ 0.89
TSPAN4-209ENST00000409543 PIGZQ86VD9 579 aa20.64■□□□□ 0.89
TSPAN4-209ENST00000409543 TTC30AQ86WT1 665 aa20.64■□□□□ 0.89
TSPAN4-209ENST00000409543 KIAA2013Q8IYS2 634 aa20.64■□□□□ 0.89
TSPAN4-209ENST00000409543 GPR161Q8N6U8 529 aaKnown RBP20.64■□□□□ 0.89
TSPAN4-209ENST00000409543 LMO3Q8TAP4 145 aa20.64■□□□□ 0.89
TSPAN4-209ENST00000409543 CDK5RAP1Q96SZ6 601 aaKnown RBP20.64■□□□□ 0.89
TSPAN4-209ENST00000409543 PNKPQ96T60 521 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms