RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 INTS6LQ5JSJ4 861 aaKnown RBP13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 KIAA1211LQ6NV74 962 aa13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 TOGARAM2Q6ZUX3 1019 aa13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 CYP2U1Q7Z449 544 aa13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 C1orf127Q8N9H9 656 aa13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 CXorf38Q8TB03 319 aa13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 PIGKQ92643 395 aa13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 RAD54LQ92698 747 aa13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 ATP2A3Q93084 1043 aa13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 TRMT2BQ96GJ1 504 aaKnown RBP13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 TMEM206Q9H813 350 aa13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 TMEM74BQ9NUR3 256 aa13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 STK17AQ9UEE5 414 aa13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 DNAI1Q9UI46 699 aa13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 AGAP1Q9UPQ3 857 aa13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 TULP1O00294 542 aaPredicted RBP13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 ATP2C2O75185 946 aa13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 GYPCP04921 128 aa13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 CCDC175P0C221 793 aa13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 CSRP1P21291 193 aaKnown RBP13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 SLC6A11P48066 632 aa13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 RPL10AP62906 217 aaKnown RBP13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 NFE2Q16621 373 aaPredicted RBP13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 EMC10Q5UCC4 262 aa13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 TTC30AQ86WT1 665 aa13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 SCN4BQ8IWT1 228 aa13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 ZNF397Q8NF99 534 aaPredicted RBP13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 OLIG1Q8TAK6 271 aa13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 CALML4Q96GE6 196 aa13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 CNOT6LQ96LI5 555 aaKnown RBP13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 ACBD6Q9BR61 282 aa13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 TRIM9Q9C026 710 aa13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 FSCN3Q9NQT6 498 aa13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 UXTQ9UBK9 157 aaPredicted RBP13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 MBD1Q9UIS9 605 aaPredicted RBP13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 TNRC6BQ9UPQ9 1833 aaKnown RBP13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 DSPP15924 2871 aaKnown RBP13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 GON4LQ3T8J9 2241 aa13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 HELZP42694 1942 aaKnown RBP13.51□□□□□ -0.25
CHRNA1-205ENST00000409542 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 A0A1W2PQC6 194 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 BICDL2A1A5D9 508 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 LGALS16A8MUM7 142 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 SCAMP3O14828 347 aaKnown RBP13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 HYAL3O43820 417 aaPredicted RBP13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 ITGB3P05106 788 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 KRT18P05783 430 aaKnown RBP13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 HDCP19113 662 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 USP46P62068 366 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 CRY1Q16526 586 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 SLFN12LQ6IEE8 588 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 TTI2Q6NXR4 508 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 ARMCX6Q7L4S7 300 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 ZNF720Q7Z2F6 126 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 IRF2BP1Q8IU81 584 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 TMTC1Q8IUR5 882 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 TMEFF1Q8IYR6 380 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 ZNF560Q96MR9 790 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 FNBP1Q96RU3 617 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 FAM213AQ9BRX8 229 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 STRA6Q9BX79 667 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 ZDHHC4Q9NPG8 344 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 EXOC1Q9NV70 894 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 TAB2Q9NYJ8 693 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 MMP17Q9ULZ9 603 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 MYOFQ9NZM1 2061 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 PCNX2A6NKB5 2137 aa13.5□□□□□ -0.25
CHRNA1-205ENST00000409542 ADAMTS9Q9P2N4 1935 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 SLC26A4O43511 780 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 PPP1R37O75864 691 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 TCF3P15923 654 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 SCP2P22307 547 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 CASP14P31944 242 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 PTGER3P43115 390 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 TFAMQ00059 246 aaKnown RBP13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 NAA30Q147X3 362 aaPredicted RBP13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 TRIM61Q5EBN2 209 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 CNNM4Q6P4Q7 775 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 RAD9BQ6WBX8 426 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 C12orf40Q86WS4 652 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 SFR1Q86XK3 245 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 ALLCQ8N6M5 410 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 POMGNT1Q8WZA1 660 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 EXOC4Q96A65 974 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 SAAL1Q96ER3 474 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 ST6GALNAC4Q9H4F1 302 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 ABCB6Q9NP58 842 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 SIX4Q9UIU6 781 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 KLK13Q9UKR3 277 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 ARHGAP26Q9UNA1 814 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 ADGRG1Q9Y653 693 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 PKD1L2Q7Z442 2459 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 CACNA1EQ15878 2313 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 FREM2Q5SZK8 3169 aa13.49□□□□□ -0.25
CHRNA1-205ENST00000409542 SPAARA0A1B0GVQ0 90 aa13.48□□□□□ -0.25
CHRNA1-205ENST00000409542 PVALEFA0A1B0GWK0 134 aa13.48□□□□□ -0.25
CHRNA1-205ENST00000409542 SOWAHDA6NJG2 315 aa13.48□□□□□ -0.25
CHRNA1-205ENST00000409542 SGK1O00141 431 aa13.48□□□□□ -0.25
CHRNA1-205ENST00000409542 LEFTY2O00292 366 aa13.48□□□□□ -0.25
CHRNA1-205ENST00000409542 GABRDO14764 452 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms