RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 SEC16BQ96JE7 1060 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 SPATA16Q9BXB7 569 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 ADGRE3Q9BY15 652 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 TRHDEQ9UKU6 1024 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 ARL2BPQ9Y2Y0 163 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 CASZ1Q86V15 1759 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 CNTFP26441 200 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 ARHGDIAP52565 204 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 TBX4P57082 545 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 ENPEPQ07075 957 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 TTC39BQ5VTQ0 682 aaPredicted RBP17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 KDM7AQ6ZMT4 941 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 KCNK18Q7Z418 384 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 C3orf20Q8ND61 904 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 SLC13A1Q9BZW2 595 aa17.39■□□□□ 0.37
PCDHA13-202ENST00000409494 A0A087X0B3 334 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 HSD17B3P37058 310 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 ITGA8P53708 1063 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 SOX10P56693 466 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 SLC6A3Q01959 620 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 TMCO4Q5TGY1 634 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 C3orf62Q6ZUJ4 267 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 SLC47A2Q86VL8 602 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 CASKIN2Q8WXE0 1202 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 UBE2OQ9C0C9 1292 aaKnown RBP17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 SENP6Q9GZR1 1112 aaPredicted RBP17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 ABCF3Q9NUQ8 709 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 STOML1Q9UBI4 398 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 PTCH2Q9Y6C5 1203 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 SLC4A7Q9Y6M7 1214 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 SDR42E2A6NKP2 422 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 HACD1B0YJ81 288 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 CRTAMO95727 393 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 AKAP5P24588 427 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 GRIK3Q13003 919 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 AP1ARQ63HQ0 302 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 MTBPQ96DY7 904 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 NIFKQ9BYG3 293 aaKnown RBP17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 ST6GALNAC4Q9H4F1 302 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 TIMM44O43615 452 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 HMOX2P30519 316 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 PMS1P54277 932 aaKnown RBP17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 CAPSQ13938 189 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 SH3D19Q5HYK7 790 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 NOMO2Q5JPE7 1267 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 HP1BP3Q5SSJ5 553 aaPredicted RBP17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 TREML2Q5T2D2 321 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 ANKMY2Q8IV38 441 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 CCDC126Q96EE4 140 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 SRPK1Q96SB4 655 aaKnown RBP17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 GAD1Q99259 594 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 TTLL13PA6NNM8 815 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 ANP32DO95626 131 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 EFTUD2Q15029 972 aaKnown RBP eCLIP17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 HSP90AA5PQ58FG0 334 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 FAM167BQ9BTA0 163 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 CDT1Q9H211 546 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 LATS2Q9NRM7 1088 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 ABCC13Q9NSE7 274 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 MSRAQ9UJ68 235 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 CRLS1Q9UJA2 301 aa17.38■□□□□ 0.37
PCDHA13-202ENST00000409494 GRK4P32298 578 aa17.37■□□□□ 0.37
PCDHA13-202ENST00000409494 PTK2BQ14289 1009 aa17.37■□□□□ 0.37
PCDHA13-202ENST00000409494 DCLRE1AQ6PJP8 1040 aa17.37■□□□□ 0.37
PCDHA13-202ENST00000409494 FAM71DQ8N9W8 422 aa17.37■□□□□ 0.37
PCDHA13-202ENST00000409494 DDI1Q8WTU0 396 aa17.37■□□□□ 0.37
PCDHA13-202ENST00000409494 ZNF669Q96BR6 464 aaPredicted RBP17.37■□□□□ 0.37
PCDHA13-202ENST00000409494 SERPINB12Q96P63 405 aa17.37■□□□□ 0.37
PCDHA13-202ENST00000409494 DCTN4Q9UJW0 460 aa17.37■□□□□ 0.37
PCDHA13-202ENST00000409494 BAZ2BQ9UIF8 2168 aaKnown RBP17.37■□□□□ 0.37
PCDHA13-202ENST00000409494 HADHAP40939 763 aa17.37■□□□□ 0.37
PCDHA13-202ENST00000409494 THEGQ9P2T0 379 aa17.37■□□□□ 0.37
PCDHA13-202ENST00000409494 PJA2O43164 708 aa17.37■□□□□ 0.37
PCDHA13-202ENST00000409494 TAL1P17542 331 aaPredicted RBP17.37■□□□□ 0.37
PCDHA13-202ENST00000409494 NLGN2Q8NFZ4 835 aa17.37■□□□□ 0.37
PCDHA13-202ENST00000409494 MRPL17Q9NRX2 175 aaKnown RBP17.37■□□□□ 0.37
PCDHA13-202ENST00000409494 COPS5Q92905 334 aa17.37■□□□□ 0.37
PCDHA13-202ENST00000409494 TNFRSF25Q93038 417 aa17.37■□□□□ 0.37
PCDHA13-202ENST00000409494 GPR20Q99678 358 aa17.37■□□□□ 0.37
PCDHA13-202ENST00000409494 PDGFCQ9NRA1 345 aa17.37■□□□□ 0.37
PCDHA13-202ENST00000409494 DOLKQ9UPQ8 538 aa17.37■□□□□ 0.37
PCDHA13-202ENST00000409494 KCPQ6ZWJ8 1503 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 FAM47DPA6NHR8 397 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 ANKRD63C9JTQ0 380 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 EIF2B5Q13144 721 aaKnown RBP17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 COL9A3Q14050 684 aaPredicted RBP17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 FAM83EQ2M2I3 478 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 PPM1LQ5SGD2 360 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 LRRC6Q86X45 466 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 LRRC49Q8IUZ0 686 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 POPDC2Q9HBU9 364 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 USP15Q9Y4E8 981 aaPredicted RBP17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 NFKBIEO00221 500 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 POU5F1Q01860 360 aaKnown RBP17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 MEA1Q16626 185 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 ZNF467Q7Z7K2 595 aaPredicted RBP17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 ARL8AQ96BM9 186 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 ELMO2Q96JJ3 720 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 CAPNS2Q96L46 248 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 C9orf72Q96LT7 481 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms