RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 HMBSP08397 361 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 USP17L7P0C7H9 530 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 KITP10721 976 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 CLDN10P78369 228 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 SKOR1P84550 965 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 TRIM32Q13049 653 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 SYDE1Q6ZW31 735 aaPredicted RBP13.04□□□□□ -0.32
ATG9A-203ENST00000409033 VPS52Q8N1B4 723 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 MSL3Q8N5Y2 521 aaKnown RBP13.04□□□□□ -0.32
ATG9A-203ENST00000409033 KLHL14Q9P2G3 628 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 DDX20Q9UHI6 824 aaKnown RBP13.04□□□□□ -0.32
ATG9A-203ENST00000409033 A0A0G2JND7 137 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 PAPSS1O43252 624 aaPredicted RBP13.04□□□□□ -0.32
ATG9A-203ENST00000409033 ATP9BO43861 1147 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 IGFBP6P24592 240 aaPredicted RBP13.04□□□□□ -0.32
ATG9A-203ENST00000409033 BCAT1P54687 386 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 SLC6A3Q01959 620 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 PTP4A2Q12974 167 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 GRB14Q14449 540 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 SOWAHAQ2M3V2 549 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 SDHAF4Q5VUM1 108 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 HIBCHQ6NVY1 386 aaPredicted RBP13.04□□□□□ -0.32
ATG9A-203ENST00000409033 PPIL6Q8IXY8 311 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 ABI1Q8IZP0 508 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 ALLCQ8N6M5 410 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 CELF6Q96J87 481 aaKnown RBP13.04□□□□□ -0.32
ATG9A-203ENST00000409033 KATNAL1Q9BW62 490 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 ZC3H7BQ9UGR2 993 aaKnown RBP13.04□□□□□ -0.32
ATG9A-203ENST00000409033 MEFVO15553 781 aaPredicted RBP13.03□□□□□ -0.32
ATG9A-203ENST00000409033 THP07101 528 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 FAM200BP0CF97 657 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 AKR1A1P14550 325 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 GOT1P17174 413 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 ABCG1P45844 678 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 ZNF143P52747 638 aaPredicted RBP13.03□□□□□ -0.32
ATG9A-203ENST00000409033 SOX4Q06945 474 aaPredicted RBP13.03□□□□□ -0.32
ATG9A-203ENST00000409033 BST2Q10589 180 aaKnown RBP13.03□□□□□ -0.32
ATG9A-203ENST00000409033 STAT4Q14765 748 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 KYAT1Q16773 422 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 FAM117BQ6P1L5 589 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 CD302Q8IX05 232 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 SPOCK2Q92563 424 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 TBC1D31Q96DN5 1066 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 SENP8Q96LD8 212 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 PEBP4Q96S96 227 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 ZIC5Q96T25 663 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 TBCBQ99426 244 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 LGMNQ99538 433 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 XPNPEP3Q9NQH7 507 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 ABI2Q9NYB9 513 aaPredicted RBP13.03□□□□□ -0.32
ATG9A-203ENST00000409033 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.03□□□□□ -0.32
ATG9A-203ENST00000409033 IL1RAPL1Q9NZN1 696 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 MARCOQ9UEW3 520 aaPredicted RBP13.03□□□□□ -0.32
ATG9A-203ENST00000409033 ABLIM1O14639 778 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 FAM189A1O60320 539 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 UPP2O95045 317 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 F7P08709 466 aaPredicted RBP13.03□□□□□ -0.32
ATG9A-203ENST00000409033 ZNF132P52740 706 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 MARCH8Q5T0T0 291 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 METTL23Q86XA0 190 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 KIF2BQ8N4N8 673 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 PGBD4Q96DM1 585 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 KCNK16Q96T55 309 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 NACA2Q9H009 215 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 TSPYL2Q9H2G4 693 aaPredicted RBP13.03□□□□□ -0.32
ATG9A-203ENST00000409033 SMYD2Q9NRG4 433 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 PPME1Q9Y570 386 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 KIAA0100Q14667 2235 aaKnown RBP13.03□□□□□ -0.32
ATG9A-203ENST00000409033 KBTBD13C9JR72 458 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 SPTLC1O15269 473 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 TRPA1O75762 1119 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 OR1G1P47890 313 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 DRG2P55039 364 aaKnown RBP13.03□□□□□ -0.32
ATG9A-203ENST00000409033 PDE1BQ01064 536 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 EFHC2Q5JST6 749 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 MROH9Q5TGP6 573 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 RGMBQ6NW40 437 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 CEP128Q6ZU80 1094 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 ULBP1Q9BZM6 244 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 PCDH9Q9HC56 1237 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 STAP1Q9ULZ2 295 aa13.03□□□□□ -0.32
ATG9A-203ENST00000409033 A0A1W2PPM1 405 aa13.02□□□□□ -0.32
ATG9A-203ENST00000409033 SUN1O94901 812 aa13.02□□□□□ -0.32
ATG9A-203ENST00000409033 CYP3A5P20815 502 aa13.02□□□□□ -0.32
ATG9A-203ENST00000409033 BDNFP23560 247 aa13.02□□□□□ -0.32
ATG9A-203ENST00000409033 HOXA11P31270 313 aaPredicted RBP13.02□□□□□ -0.32
ATG9A-203ENST00000409033 PITX1P78337 314 aaPredicted RBP13.02□□□□□ -0.32
ATG9A-203ENST00000409033 SETDB1Q15047 1291 aa13.02□□□□□ -0.32
ATG9A-203ENST00000409033 E2F5Q15329 346 aa13.02□□□□□ -0.32
ATG9A-203ENST00000409033 KCNT2Q6UVM3 1135 aa13.02□□□□□ -0.32
ATG9A-203ENST00000409033 B3GALNT2Q8NCR0 500 aa13.02□□□□□ -0.32
ATG9A-203ENST00000409033 FAM129AQ9BZQ8 928 aa13.02□□□□□ -0.32
ATG9A-203ENST00000409033 MFHAS1Q9Y4C4 1052 aa13.02□□□□□ -0.32
ATG9A-203ENST00000409033 DFFAO00273 331 aa13.02□□□□□ -0.33
ATG9A-203ENST00000409033 GRIK1P39086 918 aa13.02□□□□□ -0.33
ATG9A-203ENST00000409033 CLCNKBP51801 687 aa13.02□□□□□ -0.33
ATG9A-203ENST00000409033 BOLA3Q53S33 107 aa13.02□□□□□ -0.33
ATG9A-203ENST00000409033 SNX27Q96L92 541 aa13.02□□□□□ -0.33
ATG9A-203ENST00000409033 PAFAH2Q99487 392 aa13.02□□□□□ -0.33
ATG9A-203ENST00000409033 ADAM2Q99965 735 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms