RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 MRPS5P82675 430 aaKnown RBP19.8■□□□□ 0.76
USP39-202ENST00000409025 ADCY1Q08828 1119 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 MMRN1Q13201 1228 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 P3H1Q32P28 736 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 PAN2Q504Q3 1202 aaKnown RBP19.8■□□□□ 0.76
USP39-202ENST00000409025 DCLRE1AQ6PJP8 1040 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 GLB1LQ6UWU2 654 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.8■□□□□ 0.76
USP39-202ENST00000409025 ATP6V1G3Q96LB4 118 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 TMEM121Q9BTD3 319 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 SNRNP25Q9BV90 132 aaKnown RBP19.8■□□□□ 0.76
USP39-202ENST00000409025 SEZ6LQ9BYH1 1024 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 EPB41L4BQ9H329 900 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 HMGB1P1B2RPK0 211 aaPredicted RBP19.79■□□□□ 0.76
USP39-202ENST00000409025 M0QZQ0 153 aa19.79■□□□□ 0.76
USP39-202ENST00000409025 DAB1O75553 588 aa19.79■□□□□ 0.76
USP39-202ENST00000409025 ERMARDQ5T6L9 678 aa19.79■□□□□ 0.76
USP39-202ENST00000409025 CD300LGQ6UXG3 332 aa19.79■□□□□ 0.76
USP39-202ENST00000409025 TRMT10CQ7L0Y3 403 aaKnown RBP19.79■□□□□ 0.76
USP39-202ENST00000409025 STRADAQ7RTN6 431 aa19.79■□□□□ 0.76
USP39-202ENST00000409025 PRUNE1Q86TP1 453 aa19.79■□□□□ 0.76
USP39-202ENST00000409025 VSIG1Q86XK7 387 aa19.79■□□□□ 0.76
USP39-202ENST00000409025 FAM149B1Q96BN6 582 aa19.79■□□□□ 0.76
USP39-202ENST00000409025 RNF157Q96PX1 679 aa19.79■□□□□ 0.76
USP39-202ENST00000409025 ACBD6Q9BR61 282 aa19.79■□□□□ 0.76
USP39-202ENST00000409025 SEMA4AQ9H3S1 761 aa19.79■□□□□ 0.76
USP39-202ENST00000409025 GPATCH2LQ9NWQ4 482 aa19.79■□□□□ 0.76
USP39-202ENST00000409025 TRIM17Q9Y577 477 aa19.79■□□□□ 0.76
USP39-202ENST00000409025 NDC80O14777 642 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 FBXO21O94952 628 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 TFE3P19532 575 aaPredicted RBP19.78■□□□□ 0.76
USP39-202ENST00000409025 TKTL1P51854 596 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 YWHAZP63104 245 aaKnown RBP19.78■□□□□ 0.76
USP39-202ENST00000409025 ZC3H12AQ5D1E8 599 aaKnown RBP19.78■□□□□ 0.76
USP39-202ENST00000409025 KCTD16Q68DU8 428 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 LRRC8DQ7L1W4 858 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 DEFB106AQ8N104 65 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 RSPH1Q8WYR4 309 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 FTHL17Q9BXU8 183 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 PCDH9Q9HC56 1237 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 PCDH18Q9HCL0 1135 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 DNALI1O14645 258 aaPredicted RBP19.78■□□□□ 0.76
USP39-202ENST00000409025 MCF2LO15068 1137 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 SELPP16109 830 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 EIF3EP60228 445 aaKnown RBP19.78■□□□□ 0.76
USP39-202ENST00000409025 FAM189BP81408 668 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 GPS1Q13098 491 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 HIBCHQ6NVY1 386 aaPredicted RBP19.78■□□□□ 0.76
USP39-202ENST00000409025 GLIS1Q8NBF1 620 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 URGCPQ8TCY9 931 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 HASPINQ8TF76 798 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 RSAD2Q8WXG1 361 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 SMARCD1Q96GM5 515 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 SMOQ99835 787 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 RTP3Q9BQQ7 232 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 FOXP3Q9BZS1 431 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 CENPHQ9H3R5 247 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 AAASQ9NRG9 546 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 TSC2P49815 1807 aa19.78■□□□□ 0.76
USP39-202ENST00000409025 RIPK2O43353 540 aa19.77■□□□□ 0.76
USP39-202ENST00000409025 IFNB1P01574 187 aa19.77■□□□□ 0.76
USP39-202ENST00000409025 ZSCAN5DPP0CG00 497 aa19.77■□□□□ 0.76
USP39-202ENST00000409025 ETS1P14921 441 aa19.77■□□□□ 0.76
USP39-202ENST00000409025 PECAM1P16284 738 aaPredicted RBP19.77■□□□□ 0.76
USP39-202ENST00000409025 CHKAP35790 457 aa19.77■□□□□ 0.76
USP39-202ENST00000409025 NDUFV1P49821 464 aa19.77■□□□□ 0.76
USP39-202ENST00000409025 SULT1E1P49888 294 aa19.77■□□□□ 0.76
USP39-202ENST00000409025 CDR1P51861 262 aa19.77■□□□□ 0.76
USP39-202ENST00000409025 SLC29A2Q14542 456 aa19.77■□□□□ 0.76
USP39-202ENST00000409025 SLC25A52Q3SY17 297 aa19.77■□□□□ 0.76
USP39-202ENST00000409025 ANKRD20A8PQ5CZ79 823 aa19.77■□□□□ 0.76
USP39-202ENST00000409025 CEP128Q6ZU80 1094 aa19.77■□□□□ 0.76
USP39-202ENST00000409025 THEM5Q8N1Q8 247 aa19.77■□□□□ 0.76
USP39-202ENST00000409025 SH3TC2Q8TF17 1288 aa19.77■□□□□ 0.76
USP39-202ENST00000409025 LINC01599Q8WXQ3 324 aa19.77■□□□□ 0.76
USP39-202ENST00000409025 NDRG1Q92597 394 aaKnown RBP19.77■□□□□ 0.76
USP39-202ENST00000409025 P3H4Q92791 437 aa19.77■□□□□ 0.76
USP39-202ENST00000409025 SUSD3Q96L08 255 aa19.77■□□□□ 0.76
USP39-202ENST00000409025 ZNF670Q9BS34 389 aa19.77■□□□□ 0.76
USP39-202ENST00000409025 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.77■□□□□ 0.76
USP39-202ENST00000409025 TPX2Q9ULW0 747 aaKnown RBP19.77■□□□□ 0.76
USP39-202ENST00000409025 ZNF487B1APH4 448 aa19.76■□□□□ 0.75
USP39-202ENST00000409025 NOS2P35228 1153 aa19.76■□□□□ 0.75
USP39-202ENST00000409025 LMAN1P49257 510 aa19.76■□□□□ 0.75
USP39-202ENST00000409025 CDK7P50613 346 aa19.76■□□□□ 0.75
USP39-202ENST00000409025 BFSP2Q13515 415 aa19.76■□□□□ 0.75
USP39-202ENST00000409025 CA9Q16790 459 aa19.76■□□□□ 0.75
USP39-202ENST00000409025 KRT71Q3SY84 523 aa19.76■□□□□ 0.75
USP39-202ENST00000409025 DCAF6Q58WW2 860 aa19.76■□□□□ 0.75
USP39-202ENST00000409025 INTS6LQ5JSJ4 861 aaKnown RBP19.76■□□□□ 0.75
USP39-202ENST00000409025 HOOK3Q86VS8 718 aa19.76■□□□□ 0.75
USP39-202ENST00000409025 MYLPFQ96A32 169 aa19.76■□□□□ 0.75
USP39-202ENST00000409025 STAP1Q9ULZ2 295 aa19.76■□□□□ 0.75
USP39-202ENST00000409025 DNM1LO00429 736 aa19.76■□□□□ 0.75
USP39-202ENST00000409025 APOL1O14791 398 aa19.76■□□□□ 0.75
USP39-202ENST00000409025 TGM2P21980 687 aa19.76■□□□□ 0.75
USP39-202ENST00000409025 IL4RP24394 825 aa19.76■□□□□ 0.75
USP39-202ENST00000409025 HTRA3P83110 453 aa19.76■□□□□ 0.75
USP39-202ENST00000409025 NOMO1Q15155 1222 aa19.76■□□□□ 0.75
USP39-202ENST00000409025 DPYSL2Q16555 572 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms