RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 SLC51AQ86UW1 340 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 DAW1Q8N136 415 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 LRRN4CLQ8ND94 238 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 FNIP1Q8TF40 1166 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 ARL8AQ96BM9 186 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 TMEM169Q96HH4 297 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 SENP8Q96LD8 212 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 PRMT1Q99873 361 aaKnown RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 FAM118BQ9BPY3 351 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 SLC13A1Q9BZW2 595 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 TSPYL2Q9H2G4 693 aaPredicted RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 SMYD3Q9H7B4 428 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 RBPJLQ9UBG7 517 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 PCDHGC3Q9UN70 934 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 VPS9D1Q9Y2B5 631 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 MTO1Q9Y2Z2 717 aaKnown RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 PCDHB5Q9Y5E4 795 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 CDY2AQ9Y6F7 541 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 DPYSL4O14531 572 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 PRRG1O14668 218 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 ZNF263O14978 683 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 GYG2O15488 501 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 RIPK2O43353 540 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 PTPN1P18031 435 aaKnown RBP4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 NCF2P19878 526 aaPredicted RBP4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 YY1P25490 414 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 TNFSF9P41273 254 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 RPL21P46778 160 aaKnown RBP4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 SERPINB4P48594 390 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 CLNS1AP54105 237 aaKnown RBP4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 HDAC4P56524 1084 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 MAP3K7CLP57077 242 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 NAB1Q13506 487 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 ART3Q13508 389 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 MAPRE2Q15555 327 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 RABGAP1LQ5R372 815 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 C10orf120Q5SQS8 335 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 PLEKHA7Q6IQ23 1121 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 SLC26A11Q86WA9 606 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 FAM131BQ86XD5 332 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 ZCCHC9Q8N567 271 aaKnown RBP4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 MCUQ8NE86 351 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 SLC2A14Q8TDB8 520 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 FBXO32Q969P5 355 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 ACSF2Q96CM8 615 aaPredicted RBP4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 LRGUKQ96M69 825 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 FBXL18Q96ME1 805 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 AGAP3Q96P47 875 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 TSSK1BQ9BXA7 367 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 FTHL17Q9BXU8 183 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 NUF2Q9BZD4 464 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 PHACTR1Q9C0D0 580 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 FZD8Q9H461 694 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 EML4Q9HC35 981 aaKnown RBP4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 MLXIPLQ9NP71 852 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 CPSF2Q9P2I0 782 aaKnown RBP4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 TCHHQ07283 1943 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 TJP1Q07157 1748 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 TMEM191CA6NGB0 347 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 E5RJQ4 531 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 TIMM44O43615 452 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 SNX2O60749 519 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 RTN3O95197 1032 aaPredicted RBP4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 SLC4A1P02730 911 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 GHRP10912 638 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 CYP3A5P20815 502 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 CCR1P32246 355 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 HADHAP40939 763 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 SKOR1P84550 965 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 ASTE1Q2TB18 679 aaPredicted RBP4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 RPAINQ86UA6 219 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 DNAAF5Q86Y56 855 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 PRELID2Q8N945 189 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 FBXO36Q8NEA4 188 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 HDAC7Q8WUI4 952 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 SKA2Q8WVK7 121 aaPredicted RBP4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 PTPRN2Q92932 1015 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 ZNF669Q96BR6 464 aaPredicted RBP4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 RMDN1Q96DB5 314 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 SEC16BQ96JE7 1060 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 MAML3Q96JK9 1138 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 SERPINB11Q96P15 392 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 TMEM121Q9BTD3 319 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 POPDC2Q9HBU9 364 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 SIX2Q9NPC8 291 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 CYLDQ9NQC7 956 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 PDGFCQ9NRA1 345 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 ARHGEF38Q9NXL2 777 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 PAPPAQ13219 1627 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 A0A0U1RQJ8 604 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 ERI2A8K979 691 aaKnown RBP4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 TRIM49D1C9J1S8 452 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 H3BQF6 201 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 GLRA3O75311 464 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 DUSP11O75319 330 aaKnown RBP4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 PPFIA2O75334 1257 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 BAG2O95816 211 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 AIF1P55008 147 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 SH3BGRP55822 239 aaPredicted RBP4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 BEX3Q00994 111 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms