RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 LRRIQ3A6PVS8 624 aaPredicted RBP13.67□□□□□ -0.22
PRAME-206ENST00000406503 SLC9A3R1O14745 358 aaPredicted RBP13.67□□□□□ -0.22
PRAME-206ENST00000406503 KHNYNO15037 678 aaKnown RBP13.67□□□□□ -0.22
PRAME-206ENST00000406503 HOXC11O43248 304 aaPredicted RBP13.67□□□□□ -0.22
PRAME-206ENST00000406503 KLRC4O43908 158 aa13.67□□□□□ -0.22
PRAME-206ENST00000406503 TULP3O75386 442 aa13.67□□□□□ -0.22
PRAME-206ENST00000406503 ADH1CP00326 375 aa13.67□□□□□ -0.22
PRAME-206ENST00000406503 C4BPAP04003 597 aaKnown RBP13.67□□□□□ -0.22
PRAME-206ENST00000406503 APODP05090 189 aa13.67□□□□□ -0.22
PRAME-206ENST00000406503 PROS1P07225 676 aa13.67□□□□□ -0.22
PRAME-206ENST00000406503 SNRPFP62306 86 aaKnown RBP13.67□□□□□ -0.22
PRAME-206ENST00000406503 CLDN10P78369 228 aa13.67□□□□□ -0.22
PRAME-206ENST00000406503 HSF5Q4G112 596 aaPredicted RBP13.67□□□□□ -0.22
PRAME-206ENST00000406503 PEAR1Q5VY43 1037 aaPredicted RBP13.67□□□□□ -0.22
PRAME-206ENST00000406503 SCARA5Q6ZMJ2 495 aa13.67□□□□□ -0.22
PRAME-206ENST00000406503 ARMCX6Q7L4S7 300 aa13.67□□□□□ -0.22
PRAME-206ENST00000406503 DDX42Q86XP3 938 aaKnown RBP eCLIP13.67□□□□□ -0.22
PRAME-206ENST00000406503 TMEFF1Q8IYR6 380 aa13.67□□□□□ -0.22
PRAME-206ENST00000406503 IQUBQ8NA54 791 aa13.67□□□□□ -0.22
PRAME-206ENST00000406503 PDZD8Q8NEN9 1154 aa13.67□□□□□ -0.22
PRAME-206ENST00000406503 PARD3BQ8TEW8 1205 aa13.67□□□□□ -0.22
PRAME-206ENST00000406503 PIGKQ92643 395 aa13.67□□□□□ -0.22
PRAME-206ENST00000406503 P2RY11Q96G91 374 aa13.67□□□□□ -0.22
PRAME-206ENST00000406503 SMOQ99835 787 aa13.67□□□□□ -0.22
PRAME-206ENST00000406503 DUSP9Q99956 384 aaKnown RBP13.67□□□□□ -0.22
PRAME-206ENST00000406503 LRRC27Q9C0I9 530 aa13.67□□□□□ -0.22
PRAME-206ENST00000406503 GMIPQ9P107 970 aa13.67□□□□□ -0.22
PRAME-206ENST00000406503 MUC22E2RYF6 1773 aaPredicted RBP13.67□□□□□ -0.22
PRAME-206ENST00000406503 NUMA1Q14980 2115 aa13.67□□□□□ -0.22
PRAME-206ENST00000406503 ATXN2Q99700 1313 aaKnown RBP13.66□□□□□ -0.22
PRAME-206ENST00000406503 ANKRD11Q6UB99 2663 aaPredicted RBP13.66□□□□□ -0.22
PRAME-206ENST00000406503 TCRBV21S2A2A0A5A6 115 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 POLR2DO15514 142 aaKnown RBP13.66□□□□□ -0.22
PRAME-206ENST00000406503 CUTAO60888 179 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 RTN3O95197 1032 aaPredicted RBP13.66□□□□□ -0.22
PRAME-206ENST00000406503 YEATS4O95619 227 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 CSRP1P21291 193 aaKnown RBP13.66□□□□□ -0.22
PRAME-206ENST00000406503 ATICP31939 592 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 GRIA2P42262 883 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 TNFRSF4P43489 277 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 DLG4P78352 724 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 AMPD3Q01432 767 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 GAD2Q05329 585 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 FOXC1Q12948 553 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 ORC1Q13415 861 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 EOGTQ5NDL2 527 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 DAB2IPQ5VWQ8 1189 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 UNQ6494/PRO21346Q6UXR6 183 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 TMEM25Q86YD3 366 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 GRAMD1CQ8IYS0 662 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 NAT16Q8N8M0 369 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 TERB1Q8NA31 727 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 KIAA0895Q8NCT3 520 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 WHAMMQ8TF30 809 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 SYAP1Q96A49 352 aaPredicted RBP13.66□□□□□ -0.22
PRAME-206ENST00000406503 FSCN3Q9NQT6 498 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 DMAC2Q9NW81 257 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 TBC1D14Q9P2M4 693 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 CACNA1GO43497 2377 aa13.66□□□□□ -0.22
PRAME-206ENST00000406503 NYNRINQ9P2P1 1898 aaKnown RBP13.65□□□□□ -0.22
PRAME-206ENST00000406503 BAHCC1Q9P281 2608 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 A0A1W2PQF6 199 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 K7ELQ4 463 aaPredicted RBP13.65□□□□□ -0.22
PRAME-206ENST00000406503 ALDH1A2O94788 518 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 CEACAM1P13688 526 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 CCDC130P13994 396 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 GABRG2P18507 467 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 ITPKAP23677 461 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 TUBP50607 506 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 TRPC3Q13507 836 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 KNOP1Q1ED39 458 aaKnown RBP13.65□□□□□ -0.22
PRAME-206ENST00000406503 ZNF699Q32M78 642 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 TRIM61Q5EBN2 209 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 C1orf220Q5T0J3 134 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 HECTD3Q5T447 861 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 GPRIN1Q7Z2K8 1008 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 DEFB124Q8NES8 71 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 HMGB4Q8WW32 186 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 OTUB2Q96DC9 234 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 SMARCD1Q96GM5 515 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 CSNK1G1Q9HCP0 422 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 POLMQ9NP87 494 aaPredicted RBP13.65□□□□□ -0.22
PRAME-206ENST00000406503 DMAP1Q9NPF5 467 aaPredicted RBP13.65□□□□□ -0.22
PRAME-206ENST00000406503 CD93Q9NPY3 652 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 SPHK2Q9NRA0 654 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 KRT82Q9NSB4 513 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 OSER1Q9NX31 292 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 PILRBQ9UKJ0 227 aa13.65□□□□□ -0.22
PRAME-206ENST00000406503 PVALEFA0A1B0GWK0 134 aa13.64□□□□□ -0.23
PRAME-206ENST00000406503 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.64□□□□□ -0.23
PRAME-206ENST00000406503 HHLA1C9JL84 531 aa13.64□□□□□ -0.23
PRAME-206ENST00000406503 EXOC3O60645 756 aa13.64□□□□□ -0.23
PRAME-206ENST00000406503 AP1G2O75843 785 aa13.64□□□□□ -0.23
PRAME-206ENST00000406503 TBX18O95935 607 aa13.64□□□□□ -0.23
PRAME-206ENST00000406503 IRF1P10914 325 aa13.64□□□□□ -0.23
PRAME-206ENST00000406503 ENGP17813 658 aa13.64□□□□□ -0.23
PRAME-206ENST00000406503 STK4Q13043 487 aa13.64□□□□□ -0.23
PRAME-206ENST00000406503 NCOA4Q13772 614 aa13.64□□□□□ -0.23
PRAME-206ENST00000406503 ZNF667Q5HYK9 610 aa13.64□□□□□ -0.23
PRAME-206ENST00000406503 RESP18Q5W5W9 173 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms