RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 CD19P15391 556 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 ARF4P18085 180 aaPredicted RBP10.26□□□□□ -0.77
MSH2-202ENST00000406134 PRKCHP24723 683 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 CCNFP41002 786 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 ARHGAP1Q07960 439 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 BBS9Q3SYG4 887 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 PMF1Q6P1K2 205 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 LCLAT1Q6UWP7 414 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 BZW1Q7L1Q6 419 aaKnown RBP10.26□□□□□ -0.77
MSH2-202ENST00000406134 ZC3H18Q86VM9 953 aaKnown RBP10.26□□□□□ -0.77
MSH2-202ENST00000406134 ZBTB8OSQ8IWT0 167 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.26□□□□□ -0.77
MSH2-202ENST00000406134 ZNF398Q8TD17 642 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 RXFP2Q8WXD0 754 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 MIEF2Q96C03 454 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 APOPT1Q96IL0 206 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 CLMNQ96JQ2 1002 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 GPATCH2LQ9NWQ4 482 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 TRPM7Q96QT4 1865 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 CHADO15335 359 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 GRAP2O75791 330 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 MAP3K6O95382 1288 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 TOP3BO95985 862 aaKnown RBP10.26□□□□□ -0.77
MSH2-202ENST00000406134 TNNC2P02585 160 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 PYGBP11216 843 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 EZRP15311 586 aaKnown RBP10.26□□□□□ -0.77
MSH2-202ENST00000406134 POLR2BP30876 1174 aaKnown RBP10.26□□□□□ -0.77
MSH2-202ENST00000406134 CETN2P41208 172 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 NDST1P52848 882 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 HDAC4P56524 1084 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 KLHL38Q2WGJ6 581 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 ZNF667Q5HYK9 610 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 FAM102AQ5T9C2 384 aaPredicted RBP10.26□□□□□ -0.77
MSH2-202ENST00000406134 USP6NLQ92738 828 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 OXNAD1Q96HP4 312 aaPredicted RBP10.26□□□□□ -0.77
MSH2-202ENST00000406134 ZNF395Q9H8N7 513 aaPredicted RBP10.26□□□□□ -0.77
MSH2-202ENST00000406134 RNPEPL1Q9HAU8 725 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 WDR35Q9P2L0 1181 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 MFHAS1Q9Y4C4 1052 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 USP3Q9Y6I4 520 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 INO80B-WBP1J3KQ70 363 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 MED7O43513 233 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 KRT19P08727 400 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 CSH1P0DML2 217 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 CSH2P0DML3 217 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 ATXN1P54253 815 aaKnown RBP10.26□□□□□ -0.77
MSH2-202ENST00000406134 BASP1P80723 227 aaKnown RBP10.26□□□□□ -0.77
MSH2-202ENST00000406134 PTK7Q13308 1070 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 MARCH8Q5T0T0 291 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 PPP1R26Q5T8A7 1209 aaPredicted RBP10.26□□□□□ -0.77
MSH2-202ENST00000406134 ZNF449Q6P9G9 518 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 FBXO27Q8NI29 283 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 SPATA33Q96N06 139 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 ZMAT2Q96NC0 199 aaKnown RBP10.26□□□□□ -0.77
MSH2-202ENST00000406134 MECRQ9BV79 373 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 INO80BQ9C086 356 aaPredicted RBP10.26□□□□□ -0.77
MSH2-202ENST00000406134 KATNBL1Q9H079 304 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 MANSC1Q9H8J5 431 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 RSAD1Q9HA92 442 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 PCDH18Q9HCL0 1135 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 TSPAN16Q9UKR8 245 aa10.26□□□□□ -0.77
MSH2-202ENST00000406134 A0A1B0GUA9 196 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 SLC15A5A6NIM6 579 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 CAPN14A8MX76 684 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 ADM5C9JUS6 153 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 DCTN3O75935 186 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 METTL18O95568 372 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 STAU1O95793 577 aaKnown RBP10.25□□□□□ -0.77
MSH2-202ENST00000406134 PRKCGP05129 697 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 GPD1P21695 349 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 BGNP21810 368 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 RBL1P28749 1068 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 ROR1Q01973 937 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 FAXCQ5TGI0 409 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 RINLQ6ZS11 566 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 LONP2Q86WA8 852 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 CLEC4CQ8WTT0 213 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 NRG4Q8WWG1 115 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 RSAD2Q8WXG1 361 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 PPP1R16BQ96T49 567 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 CALN1Q9BXU9 219 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 RPF1Q9H9Y2 349 aaKnown RBP10.25□□□□□ -0.77
MSH2-202ENST00000406134 NOP53Q9NZM5 478 aaKnown RBP10.25□□□□□ -0.77
MSH2-202ENST00000406134 NR2E3Q9Y5X4 410 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 A0A087WZ62 844 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 ENTPD5O75356 428 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 CDH6P55285 790 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 TAPT1Q6NXT6 567 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 TRMT10BQ6PF06 316 aaKnown RBP10.25□□□□□ -0.77
MSH2-202ENST00000406134 C1orf228Q6PIY5 440 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 DSTYKQ6XUX3 929 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 EGFL6Q8IUX8 553 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 FAM111AQ96PZ2 611 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 MRPL45Q9BRJ2 306 aaKnown RBP10.25□□□□□ -0.77
MSH2-202ENST00000406134 FDXACB1Q9BRP7 624 aaPredicted RBP10.25□□□□□ -0.77
MSH2-202ENST00000406134 ADPGKQ9BRR6 497 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 DCTN4Q9UJW0 460 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 SCN4AP35499 1836 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 KLF11O14901 512 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 TSPAN1O60635 241 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms