RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 R4GN57 208 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 CFAP54Q96N23 3096 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 MYOFQ9NZM1 2061 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 HELZP42694 1942 aaKnown RBP6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 ATP8B3O60423 1300 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 ZNF840PA6NDX5 716 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 MAN2B1O00754 1011 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 TNFRSF10BO14763 440 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 PSMA7O14818 248 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 SLC16A3O15427 465 aaKnown RBP6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 LAMTOR5O43504 91 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 CILPO75339 1184 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 USP17L7P0C7H9 530 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 SP9P0CG40 484 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 HDCP19113 662 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 YWHAQP27348 245 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 HOXC13P31276 330 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 GTF2H1P32780 548 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 CTHP32929 405 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 ANP32AP39687 249 aaKnown RBP6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 NBL1P41271 181 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 PGFP49763 221 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 SLC5A3P53794 718 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 MAP3K7CLP57077 242 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 MCCD1P59942 119 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 ZXDBP98169 803 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 FKBP3Q00688 224 aaKnown RBP6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 CSTF1Q05048 431 aaKnown RBP6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 LRRC63Q05C16 580 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 INCA1Q0VD86 236 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 USP4Q13107 963 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 MTAPQ13126 283 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 ZNF268Q14587 947 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 MTF1Q14872 753 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 PON2Q15165 354 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 ZNF77Q15935 545 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 ITPRIPL2Q3MIP1 535 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 CCDC40Q4G0X9 1142 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 TTI2Q6NXR4 508 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 CC2D1AQ6P1N0 951 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 Q6ZS52 159 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 ASCL5Q7RTU5 278 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 GPRIN1Q7Z2K8 1008 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 UNC93AQ86WB7 457 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 NUP93Q8N1F7 819 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 CRYBG2Q8N1P7 616 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 CCDC150Q8NCX0 1101 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 FBXL13Q8NEE6 735 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 FBXO32Q969P5 355 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 SLC35C1Q96A29 364 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 CLDN23Q96B33 292 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 CHFRQ96EP1 664 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 SMARCD1Q96GM5 515 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 NELL2Q99435 816 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 FAM83CQ9BQN1 747 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 NT5C1AQ9BXI3 368 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 OSBPL6Q9BZF3 934 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 RNF38Q9H0F5 515 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 IRF2BPLQ9H1B7 796 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 LINC00597Q9H2U6 94 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 C8orf33Q9H7E9 229 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 KIF9Q9HAQ2 790 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 CYP3A43Q9HB55 503 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 DMAP1Q9NPF5 467 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 THG1LQ9NWX6 298 aaKnown RBP6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 RAB20Q9NX57 234 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 SMPD4Q9NXE4 827 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 GMIPQ9P107 970 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 MAP10Q9P2G4 905 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 ARMCX3Q9UH62 379 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 CHORDC1Q9UHD1 332 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 ZMYM5Q9UJ78 669 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 MRPS17Q9Y2R5 130 aaKnown RBP6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 MYO16Q9Y6X6 1858 aa6.11□□□□□ -1.43
HMGB1P20-201ENST00000402555 SPTBN2O15020 2390 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 FANCMQ8IYD8 2048 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 PRR23AA6NEV1 266 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 LEFTY2O00292 366 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 NCAM2O15394 837 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 STX10O60499 249 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 RTN3O95197 1032 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 OAS1P00973 400 aaKnown RBP6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 FAM200BP0CF97 657 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 MBL2P11226 248 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 CHRNB1P11230 501 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 RPS9P46781 194 aaKnown RBP6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 IFNAR2P48551 515 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 UBE2HP62256 183 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 SATB1Q01826 763 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 ENPEPQ07075 957 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 STIM1Q13586 685 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 RUNX3Q13761 415 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 GAS6Q14393 721 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 PPP1R26Q5T8A7 1209 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 FSTL4Q6MZW2 842 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 PKN3Q6P5Z2 889 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 CLEC20AQ6ZU45 233 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 RALGPS2Q86X27 583 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 ELOA2Q8IYF1 753 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 SLC4A11Q8NBS3 891 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms