RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 FKBP1AP62942 108 aaKnown RBP18.79■□□□□ 0.6
COL18A1-204ENST00000400337 ARHGAP15Q53QZ3 475 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 ZC3H12BQ5HYM0 836 aaKnown RBP18.79■□□□□ 0.6
COL18A1-204ENST00000400337 MAGEB18Q96M61 343 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 POMCP01189 267 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 COPAP53621 1224 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 BTNL9Q6UXG8 535 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 ZPBP2Q6X784 338 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 NLRP9Q7RTR0 991 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 KAT2BQ92831 832 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 TLR10Q9BXR5 811 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 AAASQ9NRG9 546 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 MYO1GB0I1T2 1018 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 ANKRD63C9JTQ0 380 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 CKMP06732 381 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 PYGMP11217 842 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 ADORA2AP29274 412 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 MAP4K3Q8IVH8 894 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 GLIS3Q8NEA6 775 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 FAM136AQ96C01 138 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 SYT15Q9BQS2 421 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 SLC40A1Q9NP59 571 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 UBP1Q9NZI7 540 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 FAM32AQ9Y421 112 aaKnown RBP18.79■□□□□ 0.6
COL18A1-204ENST00000400337 EFL1Q7Z2Z2 1120 aaKnown RBP18.79■□□□□ 0.6
COL18A1-204ENST00000400337 SLC26A11Q86WA9 606 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 EDEM1Q92611 657 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 OTULINQ96BN8 352 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 BRD8Q9H0E9 1235 aa18.79■□□□□ 0.6
COL18A1-204ENST00000400337 KCNMA1Q12791 1236 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 POLD3Q15054 466 aaPredicted RBP18.78■□□□□ 0.6
COL18A1-204ENST00000400337 BRSK2Q8IWQ3 736 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 GLIS2Q9BZE0 524 aaPredicted RBP18.78■□□□□ 0.6
COL18A1-204ENST00000400337 SLC7A5P2Q9GIP4 190 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 WWOXQ9NZC7 414 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 SUFUQ9UMX1 484 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 RPL10AP62906 217 aaKnown RBP18.78■□□□□ 0.6
COL18A1-204ENST00000400337 PPP4R4Q6NUP7 873 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 STRA8Q7Z7C7 330 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 FICDQ9BVA6 458 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 DCLK3Q9C098 648 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 PJA2O43164 708 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 ADGRB2O60241 1585 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 KRT16P08779 473 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 OXCT1P55809 520 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 HDAC4P56524 1084 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 DAB2P98082 770 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 SLC27A1Q6PCB7 646 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 COLGALT1Q8NBJ5 622 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 ZNF555Q8NEP9 628 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 CAVIN3Q969G5 261 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 C17orf80Q9BSJ5 609 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 ASB7Q9H672 318 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 LACTBL1A8MY62 500 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 DCDC2CA8MYV0 355 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 NUDT2P50583 147 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 PPATQ06203 517 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 ERMARDQ5T6L9 678 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 FKBP1CQ5VVH2 108 aa18.78■□□□□ 0.6
COL18A1-204ENST00000400337 UBE2OQ9C0C9 1292 aaKnown RBP18.78■□□□□ 0.6
COL18A1-204ENST00000400337 STRNO43815 780 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 UGT3A1Q6NUS8 523 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 MRPS31Q92665 395 aaKnown RBP18.77■□□□□ 0.6
COL18A1-204ENST00000400337 MKL1Q969V6 931 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 FAM162AQ96A26 154 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 PCDH9Q9HC56 1237 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 V9GYQ6 96 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 BFSP2Q13515 415 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 CARNMT1Q8N4J0 409 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 LRRN4CLQ8ND94 238 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 STARD7Q9NQZ5 370 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 TMEM161AQ9NX61 479 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 TRPM5Q9NZQ8 1165 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 CNTNAP2Q9UHC6 1331 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 NEURL4Q96JN8 1562 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 H3BQF6 201 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 PIK3CDO00329 1044 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 MICAL2O94851 1124 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 CASP5P51878 434 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 TTLL9Q3SXZ7 439 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 C1orf186Q6ZWK4 172 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 CYGBQ8WWM9 190 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 CEP41Q9BYV8 373 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 RNF112Q9ULX5 631 aa18.77■□□□□ 0.6
COL18A1-204ENST00000400337 HOXA2O43364 376 aa18.77■□□□□ 0.59
COL18A1-204ENST00000400337 ATN1P54259 1190 aaPredicted RBP18.77■□□□□ 0.59
COL18A1-204ENST00000400337 ADIGQ0VDE8 80 aa18.77■□□□□ 0.59
COL18A1-204ENST00000400337 DYNC1I2Q13409 638 aaKnown RBP18.77■□□□□ 0.59
COL18A1-204ENST00000400337 BMPR2Q13873 1038 aa18.77■□□□□ 0.59
COL18A1-204ENST00000400337 DMC1Q14565 340 aa18.77■□□□□ 0.59
COL18A1-204ENST00000400337 ZNF268Q14587 947 aaPredicted RBP18.77■□□□□ 0.59
COL18A1-204ENST00000400337 ZNF280DQ6N043 979 aa18.77■□□□□ 0.59
COL18A1-204ENST00000400337 HDAC7Q8WUI4 952 aa18.77■□□□□ 0.59
COL18A1-204ENST00000400337 NR1H4Q96RI1 486 aaPredicted RBP18.77■□□□□ 0.59
COL18A1-204ENST00000400337 KCNMB3Q9NPA1 279 aa18.77■□□□□ 0.59
COL18A1-204ENST00000400337 NCF1BA6NI72 391 aaPredicted RBP18.76■□□□□ 0.59
COL18A1-204ENST00000400337 NCF1CA8MVU1 366 aaPredicted RBP18.76■□□□□ 0.59
COL18A1-204ENST00000400337 EGFRP00533 1210 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 NCF1P14598 390 aaPredicted RBP18.76■□□□□ 0.59
COL18A1-204ENST00000400337 PATL1Q86TB9 770 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms