RNA–Protein interactions for RNA: ENST00000400122.7

SMARCE1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-204ENST00000400122 USP18Q9UMW8 372 aa15.34■□□□□ 0.05
SMARCE1-204ENST00000400122 EPG5Q9HCE0 2579 aa15.33■□□□□ 0.05
SMARCE1-204ENST00000400122 GON4LQ3T8J9 2241 aa15.33■□□□□ 0.05
SMARCE1-204ENST00000400122 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.33■□□□□ 0.04
SMARCE1-204ENST00000400122 FAM200BP0CF97 657 aa15.33■□□□□ 0.04
SMARCE1-204ENST00000400122 MBL2P11226 248 aaPredicted RBP15.33■□□□□ 0.04
SMARCE1-204ENST00000400122 GRIA2P42262 883 aa15.33■□□□□ 0.04
SMARCE1-204ENST00000400122 PI4KAP42356 2102 aa15.33■□□□□ 0.04
SMARCE1-204ENST00000400122 ATXN1P54253 815 aaKnown RBP15.33■□□□□ 0.04
SMARCE1-204ENST00000400122 GAD2Q05329 585 aa15.33■□□□□ 0.04
SMARCE1-204ENST00000400122 PPP3CAQ08209 521 aa15.33■□□□□ 0.04
SMARCE1-204ENST00000400122 SPEM2Q0P670 501 aa15.33■□□□□ 0.04
SMARCE1-204ENST00000400122 NUDT18Q6ZVK8 323 aa15.33■□□□□ 0.04
SMARCE1-204ENST00000400122 ETFBKMTQ8IXQ9 262 aa15.33■□□□□ 0.04
SMARCE1-204ENST00000400122 FMR1NBQ8N0W7 255 aaPredicted RBP15.33■□□□□ 0.04
SMARCE1-204ENST00000400122 SCAMP5Q8TAC9 235 aa15.33■□□□□ 0.04
SMARCE1-204ENST00000400122 SLC2A14Q8TDB8 520 aa15.33■□□□□ 0.04
SMARCE1-204ENST00000400122 CNOT6LQ96LI5 555 aaKnown RBP15.33■□□□□ 0.04
SMARCE1-204ENST00000400122 CDK5RAP1Q96SZ6 601 aaKnown RBP15.33■□□□□ 0.04
SMARCE1-204ENST00000400122 MED10Q9BTT4 135 aa15.33■□□□□ 0.04
SMARCE1-204ENST00000400122 CFAP97Q9P2B7 532 aa15.33■□□□□ 0.04
SMARCE1-204ENST00000400122 COQ4Q9Y3A0 265 aa15.33■□□□□ 0.04
SMARCE1-204ENST00000400122 STARD13Q9Y3M8 1113 aa15.33■□□□□ 0.04
SMARCE1-204ENST00000400122 HHLA1C9JL84 531 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 CETN3O15182 167 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 PMM2O15305 246 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 SLC16A3O15427 465 aaKnown RBP15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 TLR5O60602 858 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 RHOBTB1O94844 696 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 PRR29P0C7W0 189 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 ADH5P11766 374 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 PPP1R2P41236 205 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 NUCB2P80303 420 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 CRY1Q16526 586 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 PLK5Q496M5 336 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 SPDYCQ5MJ68 293 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 HEATR6Q6AI08 1181 aaKnown RBP15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 CLEC20AQ6ZU45 233 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 CCDC186Q7Z3E2 898 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 TADA2BQ86TJ2 420 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 PHTF2Q8N3S3 785 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 SPRYD3Q8NCJ5 442 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 FBXL13Q8NEE6 735 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 TAS1R2Q8TE23 839 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 CYFIP2Q96F07 1278 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 CLIC5Q9NZA1 410 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 MARK1Q9P0L2 795 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 CHORDC1Q9UHD1 332 aaPredicted RBP15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 USP3Q9Y6I4 520 aa15.32■□□□□ 0.04
SMARCE1-204ENST00000400122 THADAQ6YHU6 1953 aa15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 KAT7O95251 611 aa15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 ABL1P00519 1130 aa15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 APODP05090 189 aa15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 CCDC192P0DO97 292 aa15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 ATP5C1P36542 298 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 KIR2DL1P43626 348 aaPredicted RBP15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 GCLMP48507 274 aa15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 KIF11P52732 1056 aa15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 FKBP3Q00688 224 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 LRRC63Q05C16 580 aa15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 GOLGA8FQ08AF8 430 aa15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 GOLGA8DPQ0D2H9 430 aa15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 BECN1Q14457 450 aa15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 ELF2Q15723 593 aa15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 ZNF658Q5TYW1 1059 aaPredicted RBP15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 SCARA5Q6ZMJ2 495 aa15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 TRMT11Q7Z4G4 463 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 C12orf29Q8N999 325 aa15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 OLIG1Q8TAK6 271 aa15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 WHAMMQ8TF30 809 aa15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 DUSP16Q9BY84 665 aa15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 GOLPH3LQ9H4A5 285 aa15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 APOBEC3GQ9HC16 384 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 SPHK2Q9NRA0 654 aa15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 VPS45Q9NRW7 570 aa15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 HOOK1Q9UJC3 728 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 SH3BP1Q9Y3L3 701 aa15.31■□□□□ 0.04
SMARCE1-204ENST00000400122 GREM1O60565 184 aa15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 BEST1O76090 585 aa15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 ALDH1A2O94788 518 aa15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 EPB41P11171 864 aaKnown RBP15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 CCDC130P13994 396 aa15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 MXI1P50539 228 aa15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 MAP3K7CLP57077 242 aa15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 SRSF5Q13243 272 aaKnown RBP15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 USP39Q53GS9 565 aaKnown RBP15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 EOGTQ5NDL2 527 aa15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 BTBD8Q5XKL5 378 aa15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 ARHGAP17Q68EM7 881 aa15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 NAIF1Q69YI7 327 aaPredicted RBP15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 SMYD5Q6GMV2 418 aa15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 ENGASEQ8NFI3 743 aa15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 TSTD1Q8NFU3 115 aa15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 KLF16Q9BXK1 252 aaPredicted RBP15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 DUSP15Q9H1R2 295 aaPredicted RBP15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 CCSER2Q9H7U1 834 aa15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 RAB20Q9NX57 234 aa15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 SMPD4Q9NXE4 827 aa15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 GMIPQ9P107 970 aa15.3■□□□□ 0.04
SMARCE1-204ENST00000400122 WDR35Q9P2L0 1181 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms