RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 SMPD4Q9NXE4 827 aa16.59■□□□□ 0.25
MBD1-207ENST00000398488 DUSP12Q9UNI6 340 aa16.59■□□□□ 0.25
MBD1-207ENST00000398488 SCAMP3O14828 347 aaKnown RBP16.58■□□□□ 0.24
MBD1-207ENST00000398488 AVPR1AP37288 418 aa16.58■□□□□ 0.24
MBD1-207ENST00000398488 PPP3CCP48454 512 aa16.58■□□□□ 0.24
MBD1-207ENST00000398488 SLC8A3P57103 927 aa16.58■□□□□ 0.24
MBD1-207ENST00000398488 DAOAP59103 153 aa16.58■□□□□ 0.24
MBD1-207ENST00000398488 BPIFB4P59827 614 aa16.58■□□□□ 0.24
MBD1-207ENST00000398488 HECTD3Q5T447 861 aa16.58■□□□□ 0.24
MBD1-207ENST00000398488 SMYD5Q6GMV2 418 aa16.58■□□□□ 0.24
MBD1-207ENST00000398488 IRF2BP2Q7Z5L9 587 aa16.58■□□□□ 0.24
MBD1-207ENST00000398488 MFSD6LQ8IWD5 586 aa16.58■□□□□ 0.24
MBD1-207ENST00000398488 SCUBE3Q8IX30 993 aa16.58■□□□□ 0.24
MBD1-207ENST00000398488 EDAQ92838 391 aa16.58■□□□□ 0.24
MBD1-207ENST00000398488 PIWIL1Q96J94 861 aaKnown RBP16.58■□□□□ 0.24
MBD1-207ENST00000398488 HSFY1Q96LI6 401 aa16.58■□□□□ 0.24
MBD1-207ENST00000398488 CPXM1Q96SM3 734 aa16.58■□□□□ 0.24
MBD1-207ENST00000398488 PCDHB18PQ96TA0 734 aa16.58■□□□□ 0.24
MBD1-207ENST00000398488 MIS12Q9H081 205 aa16.58■□□□□ 0.24
MBD1-207ENST00000398488 LHX5Q9H2C1 402 aa16.58■□□□□ 0.24
MBD1-207ENST00000398488 TLR8Q9NR97 1041 aaKnown RBP16.58■□□□□ 0.24
MBD1-207ENST00000398488 GKN1Q9NS71 199 aa16.58■□□□□ 0.24
MBD1-207ENST00000398488 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.58■□□□□ 0.24
MBD1-207ENST00000398488 NAGPAQ9UK23 515 aa16.58■□□□□ 0.24
MBD1-207ENST00000398488 LRRC53A6NM62 1247 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 SOBPA7XYQ1 873 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 E5RJQ4 531 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 PAPSS1O43252 624 aaPredicted RBP16.57■□□□□ 0.24
MBD1-207ENST00000398488 TLR5O60602 858 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 RARGP13631 454 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 KRT9P35527 623 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 YWHAGP61981 247 aaKnown RBP eCLIP16.57■□□□□ 0.24
MBD1-207ENST00000398488 SLC7A9P82251 487 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 FMO1Q01740 532 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 PDCLQ13371 301 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 MEA1Q16626 185 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 PTPN20Q4JDL3 420 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 CACNA2D4Q7Z3S7 1137 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 TMEM110Q86TL2 294 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 TTC16Q8NEE8 873 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 SH3RF2Q8TEC5 729 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 C11orf16Q9NQ32 467 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 CYLDQ9NQC7 956 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 ST7Q9NRC1 585 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 ARHGAP26Q9UNA1 814 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 DAAM1Q9Y4D1 1078 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 CPQQ9Y646 472 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 TECTAO75443 2155 aa16.57■□□□□ 0.24
MBD1-207ENST00000398488 ARNTLO00327 626 aa16.56■□□□□ 0.24
MBD1-207ENST00000398488 ERBB2P04626 1255 aa16.56■□□□□ 0.24
MBD1-207ENST00000398488 FYNP06241 537 aa16.56■□□□□ 0.24
MBD1-207ENST00000398488 SRFP11831 508 aa16.56■□□□□ 0.24
MBD1-207ENST00000398488 PSMC3P17980 439 aa16.56■□□□□ 0.24
MBD1-207ENST00000398488 GDI1P31150 447 aa16.56■□□□□ 0.24
MBD1-207ENST00000398488 FCHO2Q0JRZ9 810 aa16.56■□□□□ 0.24
MBD1-207ENST00000398488 ZNF268Q14587 947 aaPredicted RBP16.56■□□□□ 0.24
MBD1-207ENST00000398488 TAF5Q15542 800 aa16.56■□□□□ 0.24
MBD1-207ENST00000398488 ZNF77Q15935 545 aa16.56■□□□□ 0.24
MBD1-207ENST00000398488 C2CD6Q53TS8 623 aa16.56■□□□□ 0.24
MBD1-207ENST00000398488 SIX6OS1Q8N1H7 587 aa16.56■□□□□ 0.24
MBD1-207ENST00000398488 CELF5Q8N6W0 485 aaKnown RBP16.56■□□□□ 0.24
MBD1-207ENST00000398488 BPIFB1Q8TDL5 484 aa16.56■□□□□ 0.24
MBD1-207ENST00000398488 STK32AQ8WU08 396 aa16.56■□□□□ 0.24
MBD1-207ENST00000398488 EDEM1Q92611 657 aa16.56■□□□□ 0.24
MBD1-207ENST00000398488 CNGB3Q9NQW8 809 aa16.56■□□□□ 0.24
MBD1-207ENST00000398488 HELZP42694 1942 aaKnown RBP16.56■□□□□ 0.24
MBD1-207ENST00000398488 FAM86C2PA6NEL3 165 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 LEFTY2O00292 366 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 PDGFBP01127 241 aaPredicted RBP16.55■□□□□ 0.24
MBD1-207ENST00000398488 MBL2P11226 248 aaPredicted RBP16.55■□□□□ 0.24
MBD1-207ENST00000398488 CDH5P33151 784 aaPredicted RBP16.55■□□□□ 0.24
MBD1-207ENST00000398488 TUBP50607 506 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 PDE6CP51160 858 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 CDR2Q01850 454 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 USP4Q13107 963 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 BSPRYQ5W0U4 402 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 TRIM68Q6AZZ1 485 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 SCML4Q8N228 414 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 CPLX3Q8WVH0 158 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 SYT11Q9BT88 431 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 TRMT61BQ9BVS5 477 aaKnown RBP16.55■□□□□ 0.24
MBD1-207ENST00000398488 SLC2A4RGQ9NR83 387 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 OBP2AQ9NY56 170 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 KIF26AQ9ULI4 1882 aaPredicted RBP16.55■□□□□ 0.24
MBD1-207ENST00000398488 COL4A2P08572 1712 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 KRBA1A5PL33 1030 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 OTOL1A6NHN0 477 aaPredicted RBP16.55■□□□□ 0.24
MBD1-207ENST00000398488 SHISA7A6NL88 538 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 DPYSL4O14531 572 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 GREM1O60565 184 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 GYPCP04921 128 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 NOMO3P69849 1222 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 TNK2Q07912 1038 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 FIGNQ5HY92 759 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 TRIM67Q6ZTA4 783 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 TTC8Q8TAM2 541 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 CPA5Q8WXQ8 436 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 PPP1R13BQ96KQ4 1090 aa16.55■□□□□ 0.24
MBD1-207ENST00000398488 KLF16Q9BXK1 252 aaPredicted RBP16.55■□□□□ 0.24
MBD1-207ENST00000398488 LINC00597Q9H2U6 94 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms