RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 ARID2Q68CP9 1835 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 WDR81Q562E7 1941 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 CNTNAP2Q9UHC6 1331 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 DOCK1Q14185 1865 aa16.63■□□□□ 0.25
CHMP1A-201ENST00000397901 AMPD1P23109 780 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 PSMA2P25787 234 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 CYLC2Q14093 348 aaPredicted RBP16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 PIGHQ14442 188 aaPredicted RBP16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 KRT72Q14CN4 511 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 PPP1R2P3Q6NXS1 205 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 CCDC62Q6P9F0 684 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 B3GNT6Q6ZMB0 384 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 PCGF5Q86SE9 256 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 TMEM35BQ8NCS4 154 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 TTC17Q96AE7 1141 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 GPRASP2Q96D09 838 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 ATG4CQ96DT6 458 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 SLC9A2Q9UBY0 812 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 RBM47A0AV96 593 aaKnown RBP16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 C3orf70A6NLC5 250 aaPredicted RBP16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 LPXNO60711 386 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 MAGEC1O60732 1142 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 DKC1O60832 514 aaKnown RBP eCLIP16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 ESRRAP11474 423 aaPredicted RBP16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 PTPN7P35236 360 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 GRIA2P42262 883 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 ARFIP2P53365 341 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 NBPF12Q5TAG4 269 aaPredicted RBP16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 NET1Q7Z628 596 aaPredicted RBP16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 SATL1Q86VE3 508 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 MAP7D3Q8IWC1 876 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 DHRS4Q9BTZ2 278 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 TMEM120AQ9BXJ8 343 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 RPAP3Q9H6T3 665 aaPredicted RBP16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 ZDHHC7Q9NXF8 308 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 CLIC5Q9NZA1 410 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 TJP2Q9UDY2 1190 aa16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 XPO7Q9UIA9 1087 aaKnown RBP16.62■□□□□ 0.25
CHMP1A-201ENST00000397901 TM9SF1O15321 606 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 DNAJC6O75061 913 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 MT-ND3P03897 115 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 CD48P09326 243 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 WEE2P0C1S8 567 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 IL1R2P27930 398 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 RFC1P35251 1148 aaPredicted RBP16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 PHEXP78562 749 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 BASP1P80723 227 aaKnown RBP16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 C6orf163Q5TEZ5 329 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 UNC45BQ8IWX7 931 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 WDTC1Q8N5D0 677 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 TFAP2BQ92481 460 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 SLC35B4Q969S0 331 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 FAM111AQ96PZ2 611 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 EBF3Q9H4W6 596 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 TIMMDC1Q9NPL8 285 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 RARBP10826 455 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 BGNP21810 368 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 YY1P25490 414 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 TNFSF9P41273 254 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 MYL6P60660 151 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 MED21Q13503 144 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 TTC7BQ86TV6 843 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 IGDCC3Q8IVU1 814 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 FAM71DQ8N9W8 422 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 JOSD2Q8TAC2 188 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 PIP4K2CQ8TBX8 421 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 MTMR12Q9C0I1 747 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 VPS11Q9H270 941 aa16.61■□□□□ 0.25
CHMP1A-201ENST00000397901 A0A0B4J269 797 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 NDC80O14777 642 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 STAM2O75886 525 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 PLOD1Q02809 727 aaPredicted RBP16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 TRMT5Q32P41 509 aaKnown RBP16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 SLFN12LQ6IEE8 588 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 DUS1LQ6P1R4 473 aaKnown RBP16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 ABHD15Q6UXT9 468 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 ZBTB33Q86T24 672 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 PDIK1LQ8N165 341 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 UBR7Q8N806 425 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 SERAC1Q96JX3 654 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 FAM161BQ96MY7 647 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 CISHQ9NSE2 258 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 LTBP3Q9NS15 1303 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 KIAA1217Q5T5P2 1943 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 TTLL13PA6NNM8 815 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 FZD9O00144 591 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 CIB2O75838 187 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 LSM8O95777 96 aaKnown RBP16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 ZFXP17010 805 aaPredicted RBP16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 SLC25A11Q02978 314 aaKnown RBP16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 ASPHQ12797 758 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 PTK7Q13308 1070 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 TMED1Q13445 227 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 XKR3Q5GH77 459 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 ARFGAP1Q8N6T3 406 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 EMC1Q8N766 993 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 CCDC110Q8TBZ0 833 aa16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 DIS3LQ8TF46 1054 aaKnown RBP16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 DNAJC1Q96KC8 554 aaKnown RBP16.6■□□□□ 0.25
CHMP1A-201ENST00000397901 KCNK13Q9HB14 408 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms