RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 TRIM73Q86UV7 250 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 DNAAF5Q86Y56 855 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 KCTD6Q8NC69 237 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 MAML3Q96JK9 1138 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 CALN1Q9BXU9 219 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 NDEL1Q9GZM8 345 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 K7ERI5 159 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 B4GALT4O60513 344 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 CYP2C8P10632 490 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 DSG3P32926 999 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 EIF2B2P49770 351 aaKnown RBP5.66□□□□□ -1.5
PTPRD-205ENST00000397611 LIG4P49917 911 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 SPOCD1Q6ZMY3 1216 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 ZFPM1Q8IX07 1006 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 CATSPER1Q8NEC5 780 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 ASAP3Q8TDY4 903 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 JADE3Q92613 823 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 EME1Q96AY2 570 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 EIF2AQ9BY44 585 aaKnown RBP5.66□□□□□ -1.5
PTPRD-205ENST00000397611 TRIM15Q9C019 465 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 PAK5Q9P286 719 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 RCOR3Q9P2K3 495 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-205ENST00000397611 INPP5FQ9Y2H2 1132 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 SNX5Q9Y5X3 404 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 IGKV6D-21A0A0A0MT36 114 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 F5H423 210 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-205ENST00000397611 GSTA4O15217 222 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 BIRC5O15392 142 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 GDF11O95390 407 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 GFAPP14136 432 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 TCN1P20061 433 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-205ENST00000397611 GRK2P25098 689 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 PSEN1P49768 467 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 C16orf72Q14CZ0 275 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 NANOGNBQ7Z5D8 188 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 AMIGO3Q86WK7 504 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 TRIM50Q86XT4 487 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 TMPRSS6Q8IU80 811 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 KLHL25Q9H0H3 589 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 AS3MTQ9HBK9 375 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 GOLGA8QA0A0J9YX86 632 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 GOLGA8OA6NCC3 632 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 GOLGA8NF8WBI6 632 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 SLC16A4O15374 487 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 ATMINO43313 823 aaPredicted RBP5.65□□□□□ -1.5
PTPRD-205ENST00000397611 DUOXA2Q1HG44 320 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 FAM47CQ5HY64 1035 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 ZBTB41Q5SVQ8 909 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 TMEM126BQ8IUX1 230 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 CCDC33Q8N5R6 958 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 BANPQ8N9N5 519 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 PRMT6Q96LA8 375 aaPredicted RBP5.65□□□□□ -1.5
PTPRD-205ENST00000397611 C1orf21Q9H246 121 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 TDRD3Q9H7E2 651 aaKnown RBP5.65□□□□□ -1.5
PTPRD-205ENST00000397611 SIGLEC16A6NMB1 481 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 ATG7O95352 703 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 RBP3P10745 1247 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 PTDSS1P48651 473 aaKnown RBP5.65□□□□□ -1.5
PTPRD-205ENST00000397611 ARHGEF6Q15052 776 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 INSCQ1MX18 579 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 LRRC8EQ6NSJ5 796 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 PATL1Q86TB9 770 aaKnown RBP5.65□□□□□ -1.5
PTPRD-205ENST00000397611 CCDC24Q8N4L8 307 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 CHST13Q8NET6 341 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 WDR60Q8WVS4 1066 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 LZICQ8WZA0 190 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 EZH1Q92800 747 aaPredicted RBP5.65□□□□□ -1.5
PTPRD-205ENST00000397611 AKT1S1Q96B36 256 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 NDNQ99608 321 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 DDX50Q9BQ39 737 aaKnown RBP5.65□□□□□ -1.5
PTPRD-205ENST00000397611 ZNRF3Q9ULT6 936 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 CHKBQ9Y259 395 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 SYNJ2BP-COX16A0A087WUM0 186 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 DEAF1O75398 565 aaPredicted RBP5.65□□□□□ -1.5
PTPRD-205ENST00000397611 CLPTM1O96005 669 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 CD58P19256 250 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 DNAJB1P25685 340 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 CDKN2BP42772 138 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 ARSEP51690 589 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 CNTN2Q02246 1040 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 PRPSAP1Q14558 356 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 PDK2Q15119 407 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 PGM5Q15124 567 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 IER5Q5VY09 327 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 PASD1Q8IV76 773 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 HSPH1Q92598 858 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 TBC1D10AQ9BXI6 508 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 COX16Q9P0S2 106 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 R3HDM2Q9Y2K5 976 aaKnown RBP5.65□□□□□ -1.5
PTPRD-205ENST00000397611 LOC100653049A0A140TA62 436 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 SH3BP5O60239 455 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 DGKIO75912 1065 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 KRT34O76011 436 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 C4BPAP04003 597 aaKnown RBP5.65□□□□□ -1.5
PTPRD-205ENST00000397611 TPBGLP0DKB5 382 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 PRKCHP24723 683 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 SERPINB8P50452 374 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 HDAC4P56524 1084 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 MFSD7Q6UXD7 560 aa5.65□□□□□ -1.5
PTPRD-205ENST00000397611 RHPN2Q8IUC4 686 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms