RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 DPYSL4O14531 572 aa24.69■■□□□ 1.54
TSPAN4-202ENST00000397396 PALMO75781 387 aa24.69■■□□□ 1.54
TSPAN4-202ENST00000397396 PROSCO94903 275 aa24.69■■□□□ 1.54
TSPAN4-202ENST00000397396 HOXA9P31269 272 aa24.69■■□□□ 1.54
TSPAN4-202ENST00000397396 RFC1P35251 1148 aaPredicted RBP24.69■■□□□ 1.54
TSPAN4-202ENST00000397396 PPP3CCP48454 512 aa24.69■■□□□ 1.54
TSPAN4-202ENST00000397396 ETF1P62495 437 aaKnown RBP24.69■■□□□ 1.54
TSPAN4-202ENST00000397396 PRPF38BQ5VTL8 546 aaKnown RBP24.69■■□□□ 1.54
TSPAN4-202ENST00000397396 NIPA2Q8N8Q9 360 aa24.69■■□□□ 1.54
TSPAN4-202ENST00000397396 SCAMP5Q8TAC9 235 aa24.69■■□□□ 1.54
TSPAN4-202ENST00000397396 CLEC4CQ8WTT0 213 aa24.69■■□□□ 1.54
TSPAN4-202ENST00000397396 FBXO32Q969P5 355 aa24.69■■□□□ 1.54
TSPAN4-202ENST00000397396 C16orf45Q96MC5 204 aaPredicted RBP24.69■■□□□ 1.54
TSPAN4-202ENST00000397396 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.69■■□□□ 1.543e-6■■■□□ 18.3
TSPAN4-202ENST00000397396 LMCD1Q9NZU5 365 aa24.69■■□□□ 1.54
TSPAN4-202ENST00000397396 COL4A4P53420 1690 aaPredicted RBP24.69■■□□□ 1.54
TSPAN4-202ENST00000397396 GRID2IPA4D2P6 1211 aa24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 C2CD4BA6NLJ0 364 aa24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 CAPN9O14815 690 aa24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 BUB1BO60566 1050 aaPredicted RBP24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 HNRNPA1P09651 372 aaKnown RBP eCLIP24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 PDGFRAP16234 1089 aa24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 PSMA2P25787 234 aa24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 SDC4P31431 198 aa24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 ZNF143P52747 638 aaPredicted RBP24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 RPL7AP62424 266 aaKnown RBP24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 IFRD2Q12894 506 aaPredicted RBP24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 MESDQ14696 234 aa24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 PPM1LQ5SGD2 360 aa24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 GIPC2Q8TF65 315 aa24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 PSMG2Q969U7 264 aa24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 PIWIL1Q96J94 861 aaKnown RBP24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 MYRFLQ96LU7 910 aa24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 SLC2A13Q96QE2 648 aa24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 CNPY3Q9BT09 278 aa24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 TLE6Q9H808 572 aa24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 MAN1C1Q9NR34 630 aa24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 TLR8Q9NR97 1041 aaKnown RBP24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 ABCC13Q9NSE7 274 aa24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 COLQQ9Y215 455 aaPredicted RBP24.68■■□□□ 1.54
TSPAN4-202ENST00000397396 EPOPA6NHQ4 379 aa24.67■■□□□ 1.54
TSPAN4-202ENST00000397396 NOS2P35228 1153 aa24.67■■□□□ 1.54
TSPAN4-202ENST00000397396 MATKP42679 507 aa24.67■■□□□ 1.54
TSPAN4-202ENST00000397396 PTPN9P43378 593 aa24.67■■□□□ 1.54
TSPAN4-202ENST00000397396 RNASE9P60153 205 aaKnown RBP24.67■■□□□ 1.54
TSPAN4-202ENST00000397396 YWHAGP61981 247 aaKnown RBP eCLIP24.67■■□□□ 1.54
TSPAN4-202ENST00000397396 DUSP6Q16828 381 aa24.67■■□□□ 1.54
TSPAN4-202ENST00000397396 SLFN11Q7Z7L1 901 aa24.67■■□□□ 1.54
TSPAN4-202ENST00000397396 LRRC57Q8N9N7 239 aa24.67■■□□□ 1.54
TSPAN4-202ENST00000397396 JOSD2Q8TAC2 188 aa24.67■■□□□ 1.54
TSPAN4-202ENST00000397396 SLC22A17Q8WUG5 538 aa24.67■■□□□ 1.54
TSPAN4-202ENST00000397396 CDK5RAP1Q96SZ6 601 aaKnown RBP24.67■■□□□ 1.54
TSPAN4-202ENST00000397396 ZDHHC7Q9NXF8 308 aa24.67■■□□□ 1.54
TSPAN4-202ENST00000397396 JRKLQ9Y4A0 524 aa24.67■■□□□ 1.54
TSPAN4-202ENST00000397396 YJEFN3A6XGL0 299 aa24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 E7ENQ6 273 aa24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 GRAP2O75791 330 aa24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 ZMYND10O75800 440 aa24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 RNF8O76064 485 aa24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 GJB6O95452 261 aa24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 POU2F2P09086 479 aa24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 SRGAP2BP0DMP2 458 aa24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 FLT3P36888 993 aa24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 BTBD8Q5XKL5 378 aa24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 BHLHA9Q7RTU4 235 aa24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 TADA2BQ86TJ2 420 aa24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 SLC35F6Q8N357 371 aa24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 EMC1Q8N766 993 aa24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 GPR152Q8TDT2 470 aa24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 RXFP2Q8WXD0 754 aa24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 KHSRPQ92945 711 aaKnown RBP eCLIP24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 ZNF512Q96ME7 567 aaPredicted RBP24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 DDX23Q9BUQ8 820 aaKnown RBP24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 IRX2Q9BZI1 471 aaPredicted RBP24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 NSUN3Q9H649 340 aaKnown RBP24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 CLIC5Q9NZA1 410 aa24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 MAGED2Q9UNF1 606 aaPredicted RBP24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 PLXNA3P51805 1871 aa24.66■■□□□ 1.54
TSPAN4-202ENST00000397396 SPDYE4A6NLX3 237 aa24.65■■□□□ 1.54
TSPAN4-202ENST00000397396 XYLBO75191 536 aa24.65■■□□□ 1.54
TSPAN4-202ENST00000397396 SPATA31D3P0C874 917 aa24.65■■□□□ 1.54
TSPAN4-202ENST00000397396 RALAP11233 206 aa24.65■■□□□ 1.54
TSPAN4-202ENST00000397396 TAF5Q15542 800 aa24.65■■□□□ 1.54
TSPAN4-202ENST00000397396 BSPRYQ5W0U4 402 aa24.65■■□□□ 1.54
TSPAN4-202ENST00000397396 SPATA31D4Q6ZUB0 917 aa24.65■■□□□ 1.54
TSPAN4-202ENST00000397396 PEX26Q7Z412 305 aa24.65■■□□□ 1.54
TSPAN4-202ENST00000397396 OLA1Q9NTK5 396 aaKnown RBP24.65■■□□□ 1.54
TSPAN4-202ENST00000397396 DZANK1Q9NVP4 752 aa24.65■■□□□ 1.54
TSPAN4-202ENST00000397396 AMFRQ9UKV5 643 aa24.65■■□□□ 1.54
TSPAN4-202ENST00000397396 HCFC2Q9Y5Z7 792 aa24.65■■□□□ 1.54
TSPAN4-202ENST00000397396 TMEM110-MUSTN1A8MSY1 372 aa24.64■■□□□ 1.54
TSPAN4-202ENST00000397396 MIF4GDA9UHW6 222 aaKnown RBP24.64■■□□□ 1.54
TSPAN4-202ENST00000397396 SPOPO43791 374 aa24.64■■□□□ 1.54
TSPAN4-202ENST00000397396 FGF19O95750 216 aa24.64■■□□□ 1.54
TSPAN4-202ENST00000397396 TNNT1P13805 278 aa24.64■■□□□ 1.54
TSPAN4-202ENST00000397396 USP46P62068 366 aa24.64■■□□□ 1.54
TSPAN4-202ENST00000397396 TAF10Q12962 218 aa24.64■■□□□ 1.54
TSPAN4-202ENST00000397396 SLC25A52Q3SY17 297 aa24.64■■□□□ 1.54
TSPAN4-202ENST00000397396 PABPC1LQ4VXU2 614 aaKnown RBP24.64■■□□□ 1.54
TSPAN4-202ENST00000397396 DEFB106AQ8N104 65 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms