RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 PRR5-ARHGAP8B1AHC4 643 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 MCF2LO15068 1137 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 TPD52L2O43399 206 aaKnown RBP9.53□□□□□ -0.88
CAPN3-206ENST00000397163 STAM2O75886 525 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 TSHRP16473 764 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 CRABP2P29373 138 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 ADARP55265 1226 aaKnown RBP9.53□□□□□ -0.88
CAPN3-206ENST00000397163 ARHGAP8P85298 464 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 ACAP1Q15027 740 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 FAM182AQ5T1J6 154 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 TTC39BQ5VTQ0 682 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-206ENST00000397163 TAS1R3Q7RTX0 852 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 MCF2L2Q86YR7 1114 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 NUDCD3Q8IVD9 361 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 PYDC1Q8WXC3 89 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 ERLEC1Q96DZ1 483 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 SMYD3Q9H7B4 428 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 TMOD2Q9NZR1 351 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 ZNF219Q9P2Y4 722 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-206ENST00000397163 CLRN2A0PK11 232 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 KLF11O14901 512 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 KRT37O76014 449 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 IL1BP01584 269 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 RBP3P10745 1247 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 NPR1P16066 1061 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 HIRAP54198 1017 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-206ENST00000397163 ENPEPQ07075 957 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 NCOA4Q13772 614 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 HADHQ16836 314 aaKnown RBP9.53□□□□□ -0.88
CAPN3-206ENST00000397163 GPAT2Q6NUI2 795 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 BBS12Q6ZW61 710 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 SLC26A11Q86WA9 606 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 GSTCDQ8NEC7 633 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 SYTL5Q8TDW5 730 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-206ENST00000397163 MASTLQ96GX5 879 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 ZBTB45Q96K62 511 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-206ENST00000397163 C7orf26Q96N11 449 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 OLFM3Q96PB7 478 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 SIKE1Q9BRV8 207 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 GLIS2Q9BZE0 524 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-206ENST00000397163 POLR3FQ9H1D9 316 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-206ENST00000397163 SEPT9Q9UHD8 586 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-206ENST00000397163 PCSK1NQ9UHG2 260 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 PLA2G4CQ9UP65 541 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 NRXN2Q9P2S2 1712 aa9.53□□□□□ -0.88
CAPN3-206ENST00000397163 CYB561D2O14569 222 aa9.52□□□□□ -0.88
CAPN3-206ENST00000397163 AVILO75366 819 aa9.52□□□□□ -0.88
CAPN3-206ENST00000397163 KRT7P08729 469 aa9.52□□□□□ -0.88
CAPN3-206ENST00000397163 SNRPAP09012 282 aaKnown RBP9.52□□□□□ -0.88
CAPN3-206ENST00000397163 CD48P09326 243 aa9.52□□□□□ -0.88
CAPN3-206ENST00000397163 ALDH1B1P30837 517 aa9.52□□□□□ -0.88
CAPN3-206ENST00000397163 CLDN10P78369 228 aa9.52□□□□□ -0.88
CAPN3-206ENST00000397163 COG7P83436 770 aa9.52□□□□□ -0.88
CAPN3-206ENST00000397163 TAP1Q03518 808 aa9.52□□□□□ -0.88
CAPN3-206ENST00000397163 DLG1Q12959 904 aa9.52□□□□□ -0.88
CAPN3-206ENST00000397163 UBAP2LQ14157 1087 aaKnown RBP9.52□□□□□ -0.88
CAPN3-206ENST00000397163 DPYSL3Q14195 570 aa9.52□□□□□ -0.88
CAPN3-206ENST00000397163 HSF5Q4G112 596 aaPredicted RBP9.52□□□□□ -0.88
CAPN3-206ENST00000397163 ZBTB41Q5SVQ8 909 aa9.52□□□□□ -0.88
CAPN3-206ENST00000397163 TRIM67Q6ZTA4 783 aa9.52□□□□□ -0.88
CAPN3-206ENST00000397163 SH2D5Q6ZV89 423 aa9.52□□□□□ -0.88
CAPN3-206ENST00000397163 KCTD6Q8NC69 237 aa9.52□□□□□ -0.88
CAPN3-206ENST00000397163 MCPH1Q8NEM0 835 aa9.52□□□□□ -0.88
CAPN3-206ENST00000397163 OR5B17Q8NGF7 314 aa9.52□□□□□ -0.88
CAPN3-206ENST00000397163 CLEC4DQ8WXI8 215 aa9.52□□□□□ -0.88
CAPN3-206ENST00000397163 USP6NLQ92738 828 aa9.52□□□□□ -0.88
CAPN3-206ENST00000397163 GPAMQ9HCL2 828 aa9.52□□□□□ -0.88
CAPN3-206ENST00000397163 IL1RAPL1Q9NZN1 696 aa9.52□□□□□ -0.88
CAPN3-206ENST00000397163 PCDHA10Q9Y5I2 948 aa9.52□□□□□ -0.88
CAPN3-206ENST00000397163 ZNF541Q9H0D2 1346 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 C3orf70A6NLC5 250 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-206ENST00000397163 FKBP6O75344 327 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 IL1R2P27930 398 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 RFC1P35251 1148 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-206ENST00000397163 AQP4P55087 323 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 ASPHQ12797 758 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 HIC1Q14526 733 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 SFT2D3Q587I9 215 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 DARS2Q6PI48 645 aaKnown RBP9.52□□□□□ -0.89
CAPN3-206ENST00000397163 NME8Q8N427 588 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 OR6Y1Q8NGX8 325 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 PPP1R14CQ8TAE6 165 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 FAF2Q96CS3 445 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 CCDC28BQ9BUN5 200 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 CALN1Q9BXU9 219 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 FRMD8P1Q9BZ68 369 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-206ENST00000397163 TUT1Q9H6E5 874 aaKnown RBP9.52□□□□□ -0.89
CAPN3-206ENST00000397163 RAVER2Q9HCJ3 691 aaKnown RBP9.52□□□□□ -0.89
CAPN3-206ENST00000397163 DNAJB4Q9UDY4 337 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 ZNF180Q9UJW8 692 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 PLLPQ9Y342 182 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 TCRBV5S1A1TA0A578 114 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 DGAT1O75907 488 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 SORBS2O94875 1100 aaKnown RBP9.52□□□□□ -0.89
CAPN3-206ENST00000397163 KDELR1P24390 212 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 STIP1P31948 543 aaKnown RBP9.52□□□□□ -0.89
CAPN3-206ENST00000397163 CAP2P40123 477 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 CCR3P51677 355 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 EPHB1P54762 984 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 RPS6P62753 249 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms