RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 SEPT7Q16181 437 aaKnown RBP14.5□□□□□ -0.09
NUP98-204ENST00000397004 RFX6Q8HWS3 928 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 ADGRF2Q8IZF7 708 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 GALNT15Q8N3T1 639 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 PPM1NQ8N819 430 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 DEPTORQ8TB45 409 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 MCUR1Q96AQ8 359 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 CALN1Q9BXU9 219 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 NIF3L1Q9GZT8 377 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 DDX43Q9NXZ2 648 aaKnown RBP14.5□□□□□ -0.09
NUP98-204ENST00000397004 DNAH12Q6ZR08 3092 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 ADORA2AP29274 412 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 PSMC1P62191 440 aaKnown RBP14.5□□□□□ -0.09
NUP98-204ENST00000397004 C15orf59Q2T9L4 293 aaPredicted RBP14.5□□□□□ -0.09
NUP98-204ENST00000397004 MAVSQ7Z434 540 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 MYLK4Q86YV6 388 aaPredicted RBP14.5□□□□□ -0.09
NUP98-204ENST00000397004 ULK2Q8IYT8 1036 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 CCDC33Q8N5R6 958 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 PDCD7Q8N8D1 485 aaKnown RBP14.5□□□□□ -0.09
NUP98-204ENST00000397004 PCMTD2Q9NV79 361 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 ITM2AO43736 263 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 RNASEH1O60930 286 aaKnown RBP14.5□□□□□ -0.09
NUP98-204ENST00000397004 ANPEPP15144 967 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 PDE1BQ01064 536 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 SNRNP48Q6IEG0 339 aaKnown RBP14.5□□□□□ -0.09
NUP98-204ENST00000397004 RAPH1Q70E73 1250 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 KCTD6Q8NC69 237 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 ZNF184Q99676 751 aaPredicted RBP14.5□□□□□ -0.09
NUP98-204ENST00000397004 SIX4Q9UIU6 781 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 A0A088AWK7 358 aa14.49□□□□□ -0.09
NUP98-204ENST00000397004 OATP04181 439 aa14.49□□□□□ -0.09
NUP98-204ENST00000397004 CYP3A5P20815 502 aa14.49□□□□□ -0.09
NUP98-204ENST00000397004 AQP5P55064 265 aa14.49□□□□□ -0.09
NUP98-204ENST00000397004 OSTNP61366 133 aa14.49□□□□□ -0.09
NUP98-204ENST00000397004 TARBP2Q15633 366 aaKnown RBP14.49□□□□□ -0.09
NUP98-204ENST00000397004 FKBP1CQ5VVH2 108 aa14.49□□□□□ -0.09
NUP98-204ENST00000397004 C1orf228Q6PIY5 440 aa14.49□□□□□ -0.09
NUP98-204ENST00000397004 USP6NLQ92738 828 aa14.49□□□□□ -0.09
NUP98-204ENST00000397004 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.49□□□□□ -0.09
NUP98-204ENST00000397004 USP18Q9UMW8 372 aa14.49□□□□□ -0.09
NUP98-204ENST00000397004 AFG3L2Q9Y4W6 797 aa14.49□□□□□ -0.09
NUP98-204ENST00000397004 SNNO75324 88 aaPredicted RBP14.49□□□□□ -0.09
NUP98-204ENST00000397004 BAG6P46379 1132 aa14.49□□□□□ -0.09
NUP98-204ENST00000397004 NOMO1Q15155 1222 aa14.49□□□□□ -0.09
NUP98-204ENST00000397004 CHI3L2Q15782 390 aa14.49□□□□□ -0.09
NUP98-204ENST00000397004 PPP1R12CQ9BZL4 782 aa14.49□□□□□ -0.09
NUP98-204ENST00000397004 NXF1Q9UBU9 619 aaKnown RBP14.49□□□□□ -0.09
NUP98-204ENST00000397004 LYPLA1O75608 230 aaPredicted RBP14.49□□□□□ -0.09
NUP98-204ENST00000397004 STAM2O75886 525 aa14.49□□□□□ -0.09
NUP98-204ENST00000397004 WDR49Q8IV35 697 aa14.49□□□□□ -0.09
NUP98-204ENST00000397004 GSTCDQ8NEC7 633 aa14.49□□□□□ -0.09
NUP98-204ENST00000397004 AZIN2Q96A70 460 aa14.49□□□□□ -0.09
NUP98-204ENST00000397004 SH3GL3Q99963 347 aa14.49□□□□□ -0.09
NUP98-204ENST00000397004 THTPAQ9BU02 230 aa14.49□□□□□ -0.09
NUP98-204ENST00000397004 CPSF3Q9UKF6 684 aaKnown RBP14.49□□□□□ -0.09
NUP98-204ENST00000397004 ADCY3O60266 1144 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 MAGEC1O60732 1142 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 PRKCGP05129 697 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 LYNP07948 512 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 GRIA2P42262 883 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 ACTR3P61158 418 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 CNTN2Q02246 1040 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 BIRC2Q13490 618 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 THNSL1Q8IYQ7 743 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 PQLC3Q8N755 202 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 PRPF31Q8WWY3 499 aaKnown RBP14.48□□□□□ -0.09
NUP98-204ENST00000397004 ZNF518BQ9C0D4 1074 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 R3HDMLQ9H3Y0 253 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 RAB6BQ9NRW1 208 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 GPATCH2LQ9NWQ4 482 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 PPARGC1AQ9UBK2 798 aaKnown RBP14.48□□□□□ -0.09
NUP98-204ENST00000397004 IQANK1A0A1B0GTG1 560 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 SLC15A5A6NIM6 579 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 B4GALT5O43286 388 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 ADCY6O43306 1168 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 TM7SF2O76062 418 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 INHBAP08476 426 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 ALDH18A1P54886 795 aaKnown RBP14.48□□□□□ -0.09
NUP98-204ENST00000397004 TFAMQ00059 246 aaKnown RBP14.48□□□□□ -0.09
NUP98-204ENST00000397004 CA9Q16790 459 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 RALGPS1Q5JS13 557 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 SLFN12LQ6IEE8 588 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 IZUMO2Q6UXV1 221 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 SLC26A11Q86WA9 606 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 PLD5Q8N7P1 536 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 CXorf38Q8TB03 319 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 C7orf26Q96N11 449 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 PGLYRP2Q96PD5 576 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.48□□□□□ -0.09
NUP98-204ENST00000397004 ZNF212Q9UDV6 495 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 EMCNQ9ULC0 261 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 GRAP2O75791 330 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 SPATA31D3P0C874 917 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 RBL1P28749 1068 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 CCNFP41002 786 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 SPATA31D4Q6ZUB0 917 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 SLC4A11Q8NBS3 891 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 ELOVL4Q9GZR5 314 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 OCEL1Q9H607 264 aa14.48□□□□□ -0.09
NUP98-204ENST00000397004 SMYD3Q9H7B4 428 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms