RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 CHADO15335 359 aa16.65■□□□□ 0.26
CCHCR1-202ENST00000396263 TROVE2P10155 538 aaKnown RBP eCLIP16.65■□□□□ 0.26
CCHCR1-202ENST00000396263 PHKA2P46019 1235 aa16.65■□□□□ 0.26
CCHCR1-202ENST00000396263 RASSF2P50749 326 aa16.65■□□□□ 0.26
CCHCR1-202ENST00000396263 MMRN1Q13201 1228 aa16.65■□□□□ 0.26
CCHCR1-202ENST00000396263 AMHR2Q16671 573 aa16.65■□□□□ 0.26
CCHCR1-202ENST00000396263 NPNTQ6UXI9 565 aa16.65■□□□□ 0.26
CCHCR1-202ENST00000396263 FAM167BQ9BTA0 163 aa16.65■□□□□ 0.26
CCHCR1-202ENST00000396263 MIS12Q9H081 205 aa16.65■□□□□ 0.26
CCHCR1-202ENST00000396263 BARX2Q9UMQ3 279 aaPredicted RBP16.65■□□□□ 0.26
CCHCR1-202ENST00000396263 DNAJC25-GNG10A0A024R161 153 aa16.64■□□□□ 0.26
CCHCR1-202ENST00000396263 C22orf31O95567 290 aa16.64■□□□□ 0.26
CCHCR1-202ENST00000396263 MT-ND3P03897 115 aa16.64■□□□□ 0.26
CCHCR1-202ENST00000396263 DHRS4L1P0CG22 281 aa16.64■□□□□ 0.26
CCHCR1-202ENST00000396263 RAB27AP51159 221 aa16.64■□□□□ 0.26
CCHCR1-202ENST00000396263 NRLP54845 237 aa16.64■□□□□ 0.26
CCHCR1-202ENST00000396263 SLC18A2Q05940 514 aa16.64■□□□□ 0.26
CCHCR1-202ENST00000396263 MTM1Q13496 603 aa16.64■□□□□ 0.26
CCHCR1-202ENST00000396263 BLMHQ13867 455 aa16.64■□□□□ 0.26
CCHCR1-202ENST00000396263 PLEKHG4Q58EX7 1191 aa16.64■□□□□ 0.26
CCHCR1-202ENST00000396263 TRNP1Q6NT89 227 aa16.64■□□□□ 0.26
CCHCR1-202ENST00000396263 FASTKD5Q7L8L6 764 aaKnown RBP16.64■□□□□ 0.26
CCHCR1-202ENST00000396263 CHSY1Q86X52 802 aa16.64■□□□□ 0.26
CCHCR1-202ENST00000396263 IFNLR1Q8IU57 520 aaPredicted RBP16.64■□□□□ 0.26
CCHCR1-202ENST00000396263 RXFP2Q8WXD0 754 aa16.64■□□□□ 0.26
CCHCR1-202ENST00000396263 HEXIM2Q96MH2 286 aaKnown RBP16.64■□□□□ 0.26
CCHCR1-202ENST00000396263 MANSC1Q9H8J5 431 aa16.64■□□□□ 0.26
CCHCR1-202ENST00000396263 NPHS2Q9NP85 383 aa16.64■□□□□ 0.26
CCHCR1-202ENST00000396263 SAR1AQ9NR31 198 aa16.64■□□□□ 0.26
CCHCR1-202ENST00000396263 SLC17A7Q9P2U7 560 aa16.64■□□□□ 0.26
CCHCR1-202ENST00000396263 NEK3P51956 506 aa16.64■□□□□ 0.25
CCHCR1-202ENST00000396263 ZNF200P98182 395 aaPredicted RBP16.64■□□□□ 0.25
CCHCR1-202ENST00000396263 PTK7Q13308 1070 aa16.64■□□□□ 0.25
CCHCR1-202ENST00000396263 SNAPC2Q13487 334 aa16.64■□□□□ 0.25
CCHCR1-202ENST00000396263 RBBP5Q15291 538 aaKnown RBP16.64■□□□□ 0.25
CCHCR1-202ENST00000396263 SH3PXD2AQ5TCZ1 1133 aa16.64■□□□□ 0.25
CCHCR1-202ENST00000396263 LCLAT1Q6UWP7 414 aa16.64■□□□□ 0.25
CCHCR1-202ENST00000396263 SH2D5Q6ZV89 423 aa16.64■□□□□ 0.25
CCHCR1-202ENST00000396263 ZC3H18Q86VM9 953 aaKnown RBP16.64■□□□□ 0.25
CCHCR1-202ENST00000396263 FBXO16Q8IX29 292 aaPredicted RBP16.64■□□□□ 0.25
CCHCR1-202ENST00000396263 RTP4Q96DX8 246 aa16.64■□□□□ 0.25
CCHCR1-202ENST00000396263 HPDLQ96IR7 371 aa16.64■□□□□ 0.25
CCHCR1-202ENST00000396263 RNF157Q96PX1 679 aa16.64■□□□□ 0.25
CCHCR1-202ENST00000396263 FRMD8Q9BZ67 464 aaPredicted RBP16.64■□□□□ 0.25
CCHCR1-202ENST00000396263 PDZD7Q9H5P4 517 aa16.64■□□□□ 0.25
CCHCR1-202ENST00000396263 USP29Q9HBJ7 922 aa16.64■□□□□ 0.25
CCHCR1-202ENST00000396263 PNPLA8Q9NP80 782 aa16.64■□□□□ 0.25
CCHCR1-202ENST00000396263 ZFP69BQ9UJL9 534 aa16.64■□□□□ 0.25
CCHCR1-202ENST00000396263 KIAA1257Q9ULG3 409 aa16.64■□□□□ 0.25
CCHCR1-202ENST00000396263 KBTBD13C9JR72 458 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 GOLGA8RI6L899 631 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 LPXNO60711 386 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 STAU1O95793 577 aaKnown RBP16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 PDGFRAP16234 1089 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 ETV4P43268 484 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 FAM183BPQ6ZVS7 135 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 TTC39CQ8N584 583 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 UBA3Q8TBC4 463 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 COPS5Q92905 334 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 APOPT1Q96IL0 206 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 KLF6Q99612 283 aaPredicted RBP16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 GBA2Q9HCG7 927 aaPredicted RBP16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 PAK5Q9P286 719 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 RBPJLQ9UBG7 517 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 LNPEPQ9UIQ6 1025 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 IKBKGQ9Y6K9 419 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 WDR91A4D1P6 747 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 PRPSAP2O60256 369 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 HNRNPCL1O60812 293 aaKnown RBP16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 CELF2O95319 508 aaKnown RBP16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 INHBAP08476 426 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 CYP3A5P20815 502 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 CCNG1P51959 295 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 PDK2Q15119 407 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 KYAT1Q16773 422 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 Q3C1V9 767 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 SLC10A6Q3KNW5 377 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 KBTBD12Q3ZCT8 623 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 TAF1BQ53T94 588 aaPredicted RBP16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 USP6NLQ92738 828 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 TBC1D10AQ9BXI6 508 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 KANSL3Q9P2N6 904 aa16.63■□□□□ 0.25
CCHCR1-202ENST00000396263 A6NHS1 94 aa16.62■□□□□ 0.25
CCHCR1-202ENST00000396263 E5RJQ4 531 aa16.62■□□□□ 0.25
CCHCR1-202ENST00000396263 FAM155BO75949 473 aa16.62■□□□□ 0.25
CCHCR1-202ENST00000396263 NDST1P52848 882 aa16.62■□□□□ 0.25
CCHCR1-202ENST00000396263 TMEM132DQ14C87 1099 aa16.62■□□□□ 0.25
CCHCR1-202ENST00000396263 CTC1Q2NKJ3 1217 aa16.62■□□□□ 0.25
CCHCR1-202ENST00000396263 C15orf59Q2T9L4 293 aaPredicted RBP16.62■□□□□ 0.25
CCHCR1-202ENST00000396263 ZNF484Q5JVG2 852 aa16.62■□□□□ 0.25
CCHCR1-202ENST00000396263 MAP7D3Q8IWC1 876 aa16.62■□□□□ 0.25
CCHCR1-202ENST00000396263 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.62■□□□□ 0.25
CCHCR1-202ENST00000396263 PTPRN2Q92932 1015 aa16.62■□□□□ 0.25
CCHCR1-202ENST00000396263 FAF2Q96CS3 445 aa16.62■□□□□ 0.25
CCHCR1-202ENST00000396263 SERAC1Q96JX3 654 aa16.62■□□□□ 0.25
CCHCR1-202ENST00000396263 C12orf65Q9H3J6 166 aaKnown RBP16.62■□□□□ 0.25
CCHCR1-202ENST00000396263 RNPEPQ9H4A4 650 aa16.62■□□□□ 0.25
CCHCR1-202ENST00000396263 TLE6Q9H808 572 aa16.62■□□□□ 0.25
CCHCR1-202ENST00000396263 ERAP1Q9NZ08 941 aa16.62■□□□□ 0.25
CCHCR1-202ENST00000396263 CPSF2Q9P2I0 782 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms