RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 PSD4Q8NDX1 1056 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 DACT3Q96B18 629 aaPredicted RBP9.23□□□□□ -0.93
MSH5-205ENST00000395853 CFAP36Q96G28 342 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 WNK4Q96J92 1243 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 CLPBQ9H078 707 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 VPS16Q9H269 839 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 TP63Q9H3D4 680 aaPredicted RBP9.23□□□□□ -0.93
MSH5-205ENST00000395853 PCDH12Q9NPG4 1184 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 SAR1AQ9NR31 198 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 IGSF9Q9P2J2 1179 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 NAV1Q8NEY1 1877 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 FLT1P17948 1338 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 F8W8V4 182 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 ADAMTS3O15072 1205 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 GSC2O15499 205 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 DDAH1O94760 285 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 BAG2O95816 211 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 BTDP43251 543 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 GSTO1P78417 241 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 SUPT20HL1Q3ZLR7 823 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 KIAA1841Q6NSI8 718 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 SCYL3Q8IZE3 742 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 FLCNQ8NFG4 579 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 TSNARE1Q96NA8 513 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 TSG101Q99816 390 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 PITPNM3Q9BZ71 974 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 NT5C3AQ9H0P0 336 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 KMT5AQ9NQR1 393 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 LIMA1Q9UHB6 759 aaKnown RBP9.23□□□□□ -0.93
MSH5-205ENST00000395853 CAPN11Q9UMQ6 739 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 ARHGAP26Q9UNA1 814 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 AP3M1Q9Y2T2 418 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 CNTNAP5Q8WYK1 1306 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 TRIM77I1YAP6 450 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 TAF4O00268 1085 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 KPNA4O00629 521 aaPredicted RBP9.22□□□□□ -0.93
MSH5-205ENST00000395853 TXNDC9O14530 226 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 TNPO2O14787 897 aaKnown RBP9.22□□□□□ -0.93
MSH5-205ENST00000395853 SLC22A1O15245 554 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 GYG2O15488 501 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 MYO1DO94832 1006 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 PON1P27169 355 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 SLC9A3P48764 834 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 FKBP1AP62942 108 aaKnown RBP9.22□□□□□ -0.93
MSH5-205ENST00000395853 CD83Q01151 205 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 KDSRQ06136 332 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 RUNX1T1Q06455 604 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 SPAG1Q07617 926 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 NPY5RQ15761 445 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 RILPL1Q5EBL4 403 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 FRA10AC1Q70Z53 315 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 OTOP3Q7RTS5 596 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 PRUNE1Q86TP1 453 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 GALNT13Q8IUC8 556 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 OR10Z1Q8NGY1 313 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 ACTRT1Q8TDG2 376 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 SCFD1Q8WVM8 642 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 ZNF486Q96H40 463 aaPredicted RBP9.22□□□□□ -0.93
MSH5-205ENST00000395853 MAP6Q96JE9 813 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 SAMD11Q96NU1 681 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 TM9SF2Q99805 663 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 FERMT1Q9BQL6 677 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 LIN28AQ9H9Z2 209 aaKnown RBP9.22□□□□□ -0.93
MSH5-205ENST00000395853 MRPL39Q9NYK5 338 aaKnown RBP9.22□□□□□ -0.93
MSH5-205ENST00000395853 CEP72Q9P209 647 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 UBA2Q9UBT2 640 aaPredicted RBP9.22□□□□□ -0.93
MSH5-205ENST00000395853 ATP6V1HQ9UI12 483 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 FBXO2Q9UK22 296 aaPredicted RBP9.22□□□□□ -0.93
MSH5-205ENST00000395853 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.22□□□□□ -0.93
MSH5-205ENST00000395853 TYW5A2RUC4 315 aaKnown RBP9.22□□□□□ -0.93
MSH5-205ENST00000395853 FAM172BPA6NC97 362 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.22□□□□□ -0.93
MSH5-205ENST00000395853 SULT1B1O43704 296 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 HLA-DRAP01903 254 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 RBP3P10745 1247 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 PKLRP30613 574 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 HOXC13P31276 330 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 VASPP50552 380 aaPredicted RBP9.22□□□□□ -0.93
MSH5-205ENST00000395853 COPB1P53618 953 aaKnown RBP9.22□□□□□ -0.93
MSH5-205ENST00000395853 OLR1P78380 273 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 UBXN1Q04323 297 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 EFTUD2Q15029 972 aaKnown RBP eCLIP9.22□□□□□ -0.933e-11■■■■■ 44.9
MSH5-205ENST00000395853 MFSD14BQ5SR56 506 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 FAM205BPQ63HN1 556 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 FAM83AQ86UY5 434 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 Q8N9G6 341 aaPredicted RBP9.22□□□□□ -0.93
MSH5-205ENST00000395853 TERB1Q8NA31 727 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 RASSF5Q8WWW0 418 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 CFAP57Q96MR6 1250 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 TMEM106CQ9BVX2 250 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 MKNK2Q9HBH9 465 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 IGSF5Q9NSI5 407 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 SIRT5Q9NXA8 310 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 EMC3Q9P0I2 261 aa9.22□□□□□ -0.93
MSH5-205ENST00000395853 PNMA6FA0A0J9YX94 578 aa9.21□□□□□ -0.93
MSH5-205ENST00000395853 ARHGEF35A5YM69 484 aa9.21□□□□□ -0.93
MSH5-205ENST00000395853 BUD23O43709 281 aaKnown RBP9.21□□□□□ -0.93
MSH5-205ENST00000395853 ZWINTO95229 277 aa9.21□□□□□ -0.93
MSH5-205ENST00000395853 TNFAIP8O95379 198 aa9.21□□□□□ -0.93
MSH5-205ENST00000395853 PTPREP23469 700 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms