RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 TMC7Q7Z402 723 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 ZDHHC14Q8IZN3 488 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 THEM5Q8N1Q8 247 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 SLCO2A1Q92959 643 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 HSFY1Q96LI6 401 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 HNRNPABQ99729 332 aaKnown RBP20.21■□□□□ 0.83
LMNB1-202ENST00000395354 ZNF576Q9H609 170 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 FAM114A2Q9NRY5 505 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 ASNSD1Q9NWL6 643 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 DDX43Q9NXZ2 648 aaKnown RBP20.21■□□□□ 0.83
LMNB1-202ENST00000395354 CHD9Q3L8U1 2897 aa20.2■□□□□ 0.82
LMNB1-202ENST00000395354 C2CD2LO14523 706 aa20.2■□□□□ 0.82
LMNB1-202ENST00000395354 URODP06132 367 aa20.2■□□□□ 0.82
LMNB1-202ENST00000395354 CTSAP10619 480 aa20.2■□□□□ 0.82
LMNB1-202ENST00000395354 COILP38432 576 aaPredicted RBP20.2■□□□□ 0.82
LMNB1-202ENST00000395354 DRG2P55039 364 aaKnown RBP20.2■□□□□ 0.82
LMNB1-202ENST00000395354 DAB2IPQ5VWQ8 1189 aa20.2■□□□□ 0.82
LMNB1-202ENST00000395354 PRSS55Q6UWB4 352 aaPredicted RBP20.2■□□□□ 0.82
LMNB1-202ENST00000395354 ARCQ7LC44 396 aa20.2■□□□□ 0.82
LMNB1-202ENST00000395354 CCDC50Q8IVM0 306 aa20.2■□□□□ 0.82
LMNB1-202ENST00000395354 PIK3R5Q8WYR1 880 aa20.2■□□□□ 0.82
LMNB1-202ENST00000395354 NCAPGQ9BPX3 1015 aa20.2■□□□□ 0.82
LMNB1-202ENST00000395354 CNPY3Q9BT09 278 aa20.2■□□□□ 0.82
LMNB1-202ENST00000395354 OSBPL8Q9BZF1 889 aa20.2■□□□□ 0.82
LMNB1-202ENST00000395354 ZBP1Q9H171 429 aa20.2■□□□□ 0.82
LMNB1-202ENST00000395354 MRPL17Q9NRX2 175 aaKnown RBP20.2■□□□□ 0.82
LMNB1-202ENST00000395354 TCRBV7S2A1N4TA0A589 114 aa20.19■□□□□ 0.82
LMNB1-202ENST00000395354 ZSCAN5CA6NGD5 496 aaPredicted RBP20.19■□□□□ 0.82
LMNB1-202ENST00000395354 C2CD4BA6NLJ0 364 aa20.19■□□□□ 0.82
LMNB1-202ENST00000395354 H7C4K7 107 aa20.19■□□□□ 0.82
LMNB1-202ENST00000395354 DPYSL4O14531 572 aa20.19■□□□□ 0.82
LMNB1-202ENST00000395354 RNF8O76064 485 aa20.19■□□□□ 0.82
LMNB1-202ENST00000395354 CXCL14O95715 111 aa20.19■□□□□ 0.82
LMNB1-202ENST00000395354 PTPN1P18031 435 aaKnown RBP20.19■□□□□ 0.82
LMNB1-202ENST00000395354 GPD1P21695 349 aa20.19■□□□□ 0.82
LMNB1-202ENST00000395354 PCK1P35558 622 aa20.19■□□□□ 0.82
LMNB1-202ENST00000395354 PTGIRP43119 386 aa20.19■□□□□ 0.82
LMNB1-202ENST00000395354 TNNT3P45378 269 aaPredicted RBP20.19■□□□□ 0.82
LMNB1-202ENST00000395354 SLC6A3Q01959 620 aa20.19■□□□□ 0.82
LMNB1-202ENST00000395354 KLF1Q13351 362 aaPredicted RBP20.19■□□□□ 0.82
LMNB1-202ENST00000395354 CTXN3Q4LDR2 81 aa20.19■□□□□ 0.82
LMNB1-202ENST00000395354 CCDC137Q6PK04 289 aaKnown RBP20.19■□□□□ 0.82
LMNB1-202ENST00000395354 OLFML1Q6UWY5 402 aa20.19■□□□□ 0.82
LMNB1-202ENST00000395354 MICAL1Q8TDZ2 1067 aa20.19■□□□□ 0.82
LMNB1-202ENST00000395354 AUTS2Q8WXX7 1259 aa20.19■□□□□ 0.82
LMNB1-202ENST00000395354 IFT81Q8WYA0 676 aa20.19■□□□□ 0.82
LMNB1-202ENST00000395354 TCF25Q9BQ70 676 aa20.19■□□□□ 0.82
LMNB1-202ENST00000395354 HINFPQ9BQA5 517 aa20.19■□□□□ 0.82
LMNB1-202ENST00000395354 RTP3Q9BQQ7 232 aa20.19■□□□□ 0.82
LMNB1-202ENST00000395354 TLR9Q9NR96 1032 aa20.19■□□□□ 0.82
LMNB1-202ENST00000395354 FEZ2Q9UHY8 353 aaPredicted RBP20.19■□□□□ 0.82
LMNB1-202ENST00000395354 SSX2IPQ9Y2D8 614 aa20.19■□□□□ 0.82
LMNB1-202ENST00000395354 EFR3BQ9Y2G0 817 aa20.19■□□□□ 0.82
LMNB1-202ENST00000395354 MYO7AQ13402 2215 aa20.18■□□□□ 0.82
LMNB1-202ENST00000395354 EPOPA6NHQ4 379 aa20.18■□□□□ 0.82
LMNB1-202ENST00000395354 SOX1O00570 391 aaPredicted RBP20.18■□□□□ 0.82
LMNB1-202ENST00000395354 HCRTO43612 131 aa20.18■□□□□ 0.82
LMNB1-202ENST00000395354 LRCH4O75427 683 aa20.18■□□□□ 0.82
LMNB1-202ENST00000395354 KRT1P04264 644 aa20.18■□□□□ 0.82
LMNB1-202ENST00000395354 RALAP11233 206 aa20.18■□□□□ 0.82
LMNB1-202ENST00000395354 CCDC130P13994 396 aa20.18■□□□□ 0.82
LMNB1-202ENST00000395354 GBP1P32455 592 aa20.18■□□□□ 0.82
LMNB1-202ENST00000395354 PLA2G4AP47712 749 aa20.18■□□□□ 0.82
LMNB1-202ENST00000395354 SLC8A3P57103 927 aa20.18■□□□□ 0.82
LMNB1-202ENST00000395354 SLC25A11Q02978 314 aaKnown RBP20.18■□□□□ 0.82
LMNB1-202ENST00000395354 GPS2Q13227 327 aa20.18■□□□□ 0.82
LMNB1-202ENST00000395354 CAMK1Q14012 370 aa20.18■□□□□ 0.82
LMNB1-202ENST00000395354 SMC1AQ14683 1233 aaKnown RBP20.18■□□□□ 0.82
LMNB1-202ENST00000395354 PSMD5Q16401 504 aa20.18■□□□□ 0.82
LMNB1-202ENST00000395354 ZNF280DQ6N043 979 aa20.18■□□□□ 0.82
LMNB1-202ENST00000395354 JAMLQ86YT9 394 aa20.18■□□□□ 0.82
LMNB1-202ENST00000395354 GSPT2Q8IYD1 628 aaKnown RBP20.18■□□□□ 0.82
LMNB1-202ENST00000395354 GPR65Q8IYL9 337 aa20.18■□□□□ 0.82
LMNB1-202ENST00000395354 SLITRK1Q96PX8 696 aa20.18■□□□□ 0.82
LMNB1-202ENST00000395354 ACBD6Q9BR61 282 aa20.18■□□□□ 0.82
LMNB1-202ENST00000395354 ERP44Q9BS26 406 aa20.18■□□□□ 0.82
LMNB1-202ENST00000395354 ENTPD7Q9NQZ7 604 aa20.18■□□□□ 0.82
LMNB1-202ENST00000395354 NFU1Q9UMS0 254 aa20.18■□□□□ 0.82
LMNB1-202ENST00000395354 ESYT3A0FGR9 886 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 RFXAPO00287 272 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 XPO1O14980 1071 aaKnown RBP20.17■□□□□ 0.82
LMNB1-202ENST00000395354 CSPG5O95196 566 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 DESP17661 470 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 ACAT1P24752 427 aaKnown RBP20.17■□□□□ 0.82
LMNB1-202ENST00000395354 PCSK1P29120 753 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 ADORA2BP29275 332 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 CA8P35219 290 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 RGS7P49802 495 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 ODF2Q5BJF6 829 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 DUPD1Q68J44 220 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 SYDE1Q6ZW31 735 aaPredicted RBP20.17■□□□□ 0.82
LMNB1-202ENST00000395354 SND1Q7KZF4 910 aaKnown RBP eCLIP20.17■□□□□ 0.821e-13■■■■■ 27.1
LMNB1-202ENST00000395354 ARFGAP1Q8N6T3 406 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 EMC1Q8N766 993 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 SLC2A14Q8TDB8 520 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 GDPD5Q8WTR4 605 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 DUSP16Q9BY84 665 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 UBXN6Q9BZV1 441 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 MTRRQ9UBK8 725 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 CDH9Q9ULB4 789 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms