RNA–Protein interactions for RNA: ENST00000395205.6

BBS4-202, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best) BASIC

Gene BBS4, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-202ENST00000395205 ROR1Q01973 937 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 DCAF6Q58WW2 860 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 C9orf50Q5SZB4 431 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 DCAF12L1Q5VU92 463 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 SCYL2Q6P3W7 929 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 ARCQ7LC44 396 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 NUP93Q8N1F7 819 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 TTC9BQ8N6N2 239 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 LRRN4CLQ8ND94 238 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 RNPC3Q96LT9 517 aaKnown RBP10.34□□□□□ -0.75
BBS4-202ENST00000395205 PLVAPQ9BX97 442 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 POPDC2Q9HBU9 364 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 NGRNQ9NPE2 291 aaKnown RBP10.34□□□□□ -0.75
BBS4-202ENST00000395205 PSD3Q9NYI0 1048 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 STK39Q9UEW8 545 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 WDR27A2RRH5 827 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 DPYSL4O14531 572 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 LRCH4O75427 683 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 HAPLN1P10915 354 aaPredicted RBP10.34□□□□□ -0.75
BBS4-202ENST00000395205 TCF4P15884 667 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 CTNNB1P35222 781 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 BMPR1AP36894 532 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 MATKP42679 507 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 SMC1AQ14683 1233 aaKnown RBP10.34□□□□□ -0.75
BBS4-202ENST00000395205 LONRF2Q1L5Z9 754 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 ATP13A4Q4VNC1 1196 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 SEL1L2Q5TEA6 688 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 PM20D1Q6GTS8 502 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 AADACL2Q6P093 401 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 HFE2Q6ZVN8 426 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 ARFGAP1Q8N6T3 406 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 GPR161Q8N6U8 529 aaKnown RBP10.34□□□□□ -0.75
BBS4-202ENST00000395205 SP7Q8TDD2 431 aaPredicted RBP10.34□□□□□ -0.75
BBS4-202ENST00000395205 GPR152Q8TDT2 470 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 FAM172AQ8WUF8 416 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 IRGQQ8WZA9 623 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 DDX23Q9BUQ8 820 aaKnown RBP10.34□□□□□ -0.75
BBS4-202ENST00000395205 COL4A6Q14031 1691 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 LTBP2Q14767 1821 aa10.34□□□□□ -0.75
BBS4-202ENST00000395205 GRXCR1A8MXD5 290 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 PGRMC1O00264 195 aaKnown RBP10.33□□□□□ -0.76
BBS4-202ENST00000395205 TNFRSF10BO14763 440 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 DAB1O75553 588 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 CXCL14O95715 111 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 FGGP02679 453 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 LTFP02788 710 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 LINC00271P0C7V0 271 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 NCAM1P13591 858 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 MIPP30301 263 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 NOS2P35228 1153 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 TUFMP49411 452 aaKnown RBP10.33□□□□□ -0.76
BBS4-202ENST00000395205 SULT1E1P49888 294 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 RPL10AP62906 217 aaKnown RBP10.33□□□□□ -0.76
BBS4-202ENST00000395205 SHHQ15465 462 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 RASIP1Q5U651 963 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 LRRC38Q5VT99 294 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 TMC7Q7Z402 723 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 CCDC50Q8IVM0 306 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 STKLD1Q8NE28 680 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 ACTRT1Q8TDG2 376 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 CRISPLD1Q9H336 500 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 USP18Q9UMW8 372 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 NAALADL1Q9UQQ1 740 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 SSX2IPQ9Y2D8 614 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 USP3Q9Y6I4 520 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 FNDC1Q4ZHG4 1894 aaPredicted RBP10.33□□□□□ -0.76
BBS4-202ENST00000395205 PRPSAP2O60256 369 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 CSPG5O95196 566 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 VNN2O95498 520 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 KRT7P08729 469 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 MYOGP15173 224 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 PCK1P35558 622 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 CETN2P41208 172 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 PTPN9P43378 593 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 LLGL1Q15334 1064 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 SYPL2Q5VXT5 272 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 BSPRYQ5W0U4 402 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 KATNAL2Q8IYT4 538 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 RCOR2Q8IZ40 523 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 RASGEF1CQ8N431 466 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 ZNF461Q8TAF7 563 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 GIPC2Q8TF65 315 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 EDEM1Q92611 657 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 RNF25Q96BH1 459 aaPredicted RBP10.33□□□□□ -0.76
BBS4-202ENST00000395205 NCAPGQ9BPX3 1015 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 FBXO44Q9H4M3 255 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 CYP4F11Q9HBI6 524 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 ALG13Q9NP73 1137 aaKnown RBP10.33□□□□□ -0.76
BBS4-202ENST00000395205 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.33□□□□□ -0.76
BBS4-202ENST00000395205 KLHL11Q9NVR0 708 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 DDX56Q9NY93 547 aaKnown RBP10.33□□□□□ -0.76
BBS4-202ENST00000395205 AFF4Q9UHB7 1163 aaKnown RBP10.33□□□□□ -0.76
BBS4-202ENST00000395205 STAP1Q9ULZ2 295 aa10.33□□□□□ -0.76
BBS4-202ENST00000395205 MKI67P46013 3256 aaKnown RBP10.32□□□□□ -0.76
BBS4-202ENST00000395205 SYNJ2BP-COX16A0A087WUM0 186 aa10.32□□□□□ -0.76
BBS4-202ENST00000395205 LINC01553A4QN01 128 aa10.32□□□□□ -0.76
BBS4-202ENST00000395205 PI4K2BG5E9Z4 385 aa10.32□□□□□ -0.76
BBS4-202ENST00000395205 TRUB2O95900 331 aaKnown RBP10.32□□□□□ -0.76
BBS4-202ENST00000395205 KRT1P04264 644 aa10.32□□□□□ -0.76
BBS4-202ENST00000395205 CTSAP10619 480 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms