RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 EMC10Q5UCC4 262 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 KRT39Q6A163 491 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 TTI2Q6NXR4 508 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 PRR23CQ6ZRP0 262 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 LONP2Q86WA8 852 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 CPA6Q8N4T0 437 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 LMO3Q8TAP4 145 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 OVCA2Q8WZ82 227 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 CD101Q93033 1021 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 ATP2A3Q93084 1043 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 SLC35C1Q96A29 364 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 CYFIP2Q96F07 1278 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 GSDMAQ96QA5 445 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 ZSWIM1Q9BR11 485 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 NT5C1AQ9BXI3 368 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 KLF16Q9BXK1 252 aaPredicted RBP9.37□□□□□ -0.91
ATG4A-205ENST00000394892 RAB20Q9NX57 234 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 NUDT5Q9UKK9 219 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.37□□□□□ -0.91
ATG4A-205ENST00000394892 TCHHQ07283 1943 aa9.37□□□□□ -0.91
ATG4A-205ENST00000394892 FANCMQ8IYD8 2048 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 A0A1W2PQH9 124 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 CETN3O15182 167 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 CALCAP01258 141 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 MBL2P11226 248 aaPredicted RBP9.36□□□□□ -0.91
ATG4A-205ENST00000394892 KRT13P13646 458 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 DRD1P21728 446 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 RPL13P26373 211 aaKnown RBP9.36□□□□□ -0.91
ATG4A-205ENST00000394892 MXI1P50539 228 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 KIF11P52732 1056 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 MORC3Q14149 939 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 BECN1Q14457 450 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 AASDHQ4L235 1098 aaPredicted RBP9.36□□□□□ -0.91
ATG4A-205ENST00000394892 HECTD3Q5T447 861 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 BHLHA9Q7RTU4 235 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 WDR5BQ86VZ2 330 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 TTC30AQ86WT1 665 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 BBS7Q8IWZ6 715 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 ETFBKMTQ8IXQ9 262 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 ELOA2Q8IYF1 753 aaPredicted RBP9.36□□□□□ -0.91
ATG4A-205ENST00000394892 C12orf50Q8NA57 414 aaPredicted RBP9.36□□□□□ -0.91
ATG4A-205ENST00000394892 FBXL13Q8NEE6 735 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 RPLP0P6Q8NHW5 317 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 USP33Q8TEY7 942 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 NDRG1Q92597 394 aaKnown RBP9.36□□□□□ -0.91
ATG4A-205ENST00000394892 KAT5Q92993 513 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 CCDC47Q96A33 483 aaKnown RBP9.36□□□□□ -0.91
ATG4A-205ENST00000394892 JAKMIP2Q96AA8 810 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 SLITRK1Q96PX8 696 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 HHIPQ96QV1 700 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 ZDHHC4Q9NPG8 344 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 CISHQ9NSE2 258 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 SCML2Q9UQR0 700 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 USP3Q9Y6I4 520 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 PTPRDP23468 1912 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 OBSL1O75147 1896 aa9.36□□□□□ -0.91
ATG4A-205ENST00000394892 A0A0A0MRY4 1105 aa9.35□□□□□ -0.91
ATG4A-205ENST00000394892 E2F8A0AVK6 867 aa9.35□□□□□ -0.91
ATG4A-205ENST00000394892 RNF225M0QZC1 329 aaPredicted RBP9.35□□□□□ -0.91
ATG4A-205ENST00000394892 DCLK1O15075 740 aa9.35□□□□□ -0.91
ATG4A-205ENST00000394892 SLC16A3O15427 465 aaKnown RBP9.35□□□□□ -0.91
ATG4A-205ENST00000394892 TLR5O60602 858 aa9.35□□□□□ -0.91
ATG4A-205ENST00000394892 KLKB1P03952 638 aa9.35□□□□□ -0.91
ATG4A-205ENST00000394892 FAM200BP0CF97 657 aa9.35□□□□□ -0.91
ATG4A-205ENST00000394892 P4HA1P13674 534 aa9.35□□□□□ -0.91
ATG4A-205ENST00000394892 ACO1P21399 889 aaKnown RBP9.35□□□□□ -0.91
ATG4A-205ENST00000394892 KIR2DL1P43626 348 aaPredicted RBP9.35□□□□□ -0.91
ATG4A-205ENST00000394892 TUBP50607 506 aa9.35□□□□□ -0.91
ATG4A-205ENST00000394892 FKBP3Q00688 224 aaKnown RBP9.35□□□□□ -0.91
ATG4A-205ENST00000394892 LY6G5CQ5SRR4 150 aa9.35□□□□□ -0.91
ATG4A-205ENST00000394892 TMEM92Q6UXU6 159 aa9.35□□□□□ -0.91
ATG4A-205ENST00000394892 KBTBD6Q86V97 674 aa9.35□□□□□ -0.91
ATG4A-205ENST00000394892 TMEM25Q86YD3 366 aa9.35□□□□□ -0.91
ATG4A-205ENST00000394892 KIAA1958Q8N8K9 716 aa9.35□□□□□ -0.91
ATG4A-205ENST00000394892 PDZD8Q8NEN9 1154 aa9.35□□□□□ -0.91
ATG4A-205ENST00000394892 SMARCE1Q969G3 411 aa9.35□□□□□ -0.91
ATG4A-205ENST00000394892 DUSP16Q9BY84 665 aa9.35□□□□□ -0.91
ATG4A-205ENST00000394892 CYLDQ9NQC7 956 aa9.35□□□□□ -0.91
ATG4A-205ENST00000394892 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.35□□□□□ -0.91
ATG4A-205ENST00000394892 COMMD8Q9NX08 183 aa9.35□□□□□ -0.91
ATG4A-205ENST00000394892 ANGPTL2Q9UKU9 493 aa9.35□□□□□ -0.91
ATG4A-205ENST00000394892 GREB1Q4ZG55 1949 aa9.35□□□□□ -0.91
ATG4A-205ENST00000394892 ATP8B3O60423 1300 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 BIN1O00499 593 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 ADAM23O75077 832 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 CLSTN1O94985 981 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 SMC2O95347 1197 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 NFATC1O95644 943 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 IRF1P10914 325 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 EPB41P11171 864 aaKnown RBP9.34□□□□□ -0.91
ATG4A-205ENST00000394892 SEC13P55735 322 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 LRMPQ12912 555 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 CUL2Q13617 745 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 DMC1Q14565 340 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 PKDCCQ504Y2 493 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 RAB41Q5JT25 222 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 ARHGAP17Q68EM7 881 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 Q6ZNB5 142 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 HTR3DQ70Z44 454 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 SYT13Q7L8C5 426 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms