RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 EP400Q96L91 3159 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 TCRBV5S1A1TA0A578 114 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 H7C0C1 242 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 POLRMTO00411 1230 aaKnown RBP17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 ATP5OP48047 213 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 SLC25A11Q02978 314 aaKnown RBP17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 TEX44Q53QW1 395 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 C1orf228Q6PIY5 440 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 SYTL5Q8TDW5 730 aaPredicted RBP17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 NGLY1Q96IV0 654 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 MSTO1Q9BUK6 570 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 MAD1L1Q9Y6D9 718 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 RFPL1O75677 317 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 ZMPSTE24O75844 475 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 IL1BP01584 269 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 RAG1P15918 1043 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 MTERF2Q49AM1 385 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 PABPC1LQ4VXU2 614 aaKnown RBP17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 C16orf46Q6P387 395 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 KYAT3Q6YP21 454 aaKnown RBP17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 CLEC4DQ8WXI8 215 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 TFAP2BQ92481 460 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 TMEM143Q96AN5 459 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 CCDC28BQ9BUN5 200 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 XPNPEP1Q9NQW7 623 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 SIRPGQ9P1W8 387 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 PACSIN3Q9UKS6 424 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 PHF24Q9UPV7 400 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 PPME1Q9Y570 386 aa17.05■□□□□ 0.32
EFEMP1-202ENST00000394555 KRT7P08729 469 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 CD19P15391 556 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 RPS6P62753 249 aaKnown RBP17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 ROR1Q01973 937 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 CCNIQ14094 377 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 HNRNPDQ14103 355 aaKnown RBP17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 SMAD1Q15797 465 aaKnown RBP17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 LGSNQ5TDP6 509 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 OLFML2BQ68BL8 750 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 FAM160B2Q86V87 743 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 TARS2Q9BW92 718 aaKnown RBP17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 XAB2Q9HCS7 855 aaKnown RBP17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 SMYD2Q9NRG4 433 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 TTLL3Q9Y4R7 772 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 BTAF1O14981 1849 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 LRRIQ4A6NIV6 560 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 ICAM1P05362 532 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 CLDN10P78369 228 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 TTLL12Q14166 644 aaPredicted RBP17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 R3HDM1Q15032 1099 aaKnown RBP17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 DPY19L2Q6NUT2 758 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 AAGABQ6PD74 315 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 HPS6Q86YV9 775 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 CDAN1Q8IWY9 1227 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 RMDN3Q96TC7 470 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 MIS12Q9H081 205 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 DDX18Q9NVP1 670 aaKnown RBP17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 RHBDL2Q9NX52 303 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 FEM1BQ9UK73 627 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 DNAJC16Q9Y2G8 782 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 PCDHA10Q9Y5I2 948 aa17.04■□□□□ 0.32
EFEMP1-202ENST00000394555 SDR42E2A6NKP2 422 aa17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 ITM2AO43736 263 aa17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 APRTP07741 180 aa17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 KRT76Q01546 638 aa17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 FOLH1Q04609 750 aa17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 PGM5Q15124 567 aa17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 STRIP1Q5VSL9 837 aa17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 PPP1R2P3Q6NXS1 205 aa17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 FBXL19Q6PCT2 694 aa17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 NIPA1Q7RTP0 329 aa17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 POLNQ7Z5Q5 900 aa17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 APOBEC2Q9Y235 224 aaKnown RBP17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 CAPN8A6NHC0 703 aa17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 CSH1P0DML2 217 aa17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 CSH2P0DML3 217 aa17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 NCF2P19878 526 aaPredicted RBP17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 COPAP53621 1224 aa17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 PSMC1P62191 440 aaKnown RBP17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 YWHAZP63104 245 aaKnown RBP17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 ORC1Q13415 861 aa17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 ANGEL2Q5VTE6 544 aaKnown RBP17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 WDR75Q8IWA0 830 aaKnown RBP17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 STKLD1Q8NE28 680 aa17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 C1orf21Q9H246 121 aa17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 CISHQ9NSE2 258 aa17.03■□□□□ 0.32
EFEMP1-202ENST00000394555 SPDYE2BA6NHP3 402 aa17.02■□□□□ 0.32
EFEMP1-202ENST00000394555 APOC4-APOC2K7ER74 178 aa17.02■□□□□ 0.32
EFEMP1-202ENST00000394555 ENTPD3O75355 529 aa17.02■□□□□ 0.32
EFEMP1-202ENST00000394555 APOC2P02655 101 aa17.02■□□□□ 0.32
EFEMP1-202ENST00000394555 BPGMP07738 259 aa17.02■□□□□ 0.32
EFEMP1-202ENST00000394555 SPDYE6P0CI01 402 aa17.02■□□□□ 0.32
EFEMP1-202ENST00000394555 ATP6V1B1P15313 513 aa17.02■□□□□ 0.32
EFEMP1-202ENST00000394555 KCNA4P22459 653 aa17.02■□□□□ 0.32
EFEMP1-202ENST00000394555 SFNP31947 248 aa17.02■□□□□ 0.32
EFEMP1-202ENST00000394555 CHN2P52757 468 aa17.02■□□□□ 0.32
EFEMP1-202ENST00000394555 MYL6P60660 151 aa17.02■□□□□ 0.32
EFEMP1-202ENST00000394555 RPL10AP62906 217 aaKnown RBP17.02■□□□□ 0.32
EFEMP1-202ENST00000394555 DGKZQ13574 1117 aa17.02■□□□□ 0.32
EFEMP1-202ENST00000394555 SPDYE2Q495Y8 402 aa17.02■□□□□ 0.32
EFEMP1-202ENST00000394555 DENND1BQ6P3S1 775 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms