RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 MECRQ9BV79 373 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 TBC1D10AQ9BXI6 508 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 GEMIN8Q9NWZ8 242 aaKnown RBP14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 SLC24A2Q9UI40 661 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 TNFSF13BQ9Y275 285 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 PPEF2O14830 753 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 STRNO43815 780 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 CILPO75339 1184 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 SKAP2O75563 359 aaPredicted RBP14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 KRT7P08729 469 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 PYGBP11216 843 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 BGNP21810 368 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 CLNS1AP54105 237 aaKnown RBP14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 GRM1Q13255 1194 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 HADHQ16836 314 aaKnown RBP14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 OR6B2Q6IFH4 312 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 ANKRD23Q86SG2 305 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 CMASQ8NFW8 434 aaPredicted RBP14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 NPLOC4Q8TAT6 608 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 NLRP7Q8WX94 980 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 TTC17Q96AE7 1141 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 MIPEPQ99797 713 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 B3GNT5Q9BYG0 378 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 MORF4L1Q9UBU8 362 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 GINS2Q9Y248 185 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 H7C0C1 242 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 ENTPD5O75356 428 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 ATP5OP48047 213 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 NDST1P52848 882 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 TAP1Q03518 808 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 TMEM62Q0P6H9 643 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 BMPR2Q13873 1038 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 SETDB1Q15047 1291 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 AMHR2Q16671 573 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 PRAMEF19Q5SWL8 479 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 GRAMD1AQ96CP6 724 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 TMEM176AQ96HP8 235 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 LHX5Q9H2C1 402 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 PRMT7Q9NVM4 692 aaPredicted RBP14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 STRIP2Q9ULQ0 834 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 NME7Q9Y5B8 376 aa14.06□□□□□ -0.16
GTF2F1-201ENST00000394456 E7ESA3 106 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 APOC4-APOC2K7ER74 178 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 GABBR2O75899 941 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 APOC2P02655 101 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 HMGCRP04035 888 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 PFKMP08237 780 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 PDGFRAP16234 1089 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 ARF4P18085 180 aaPredicted RBP14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 ERFP50548 548 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 PTK7Q13308 1070 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 SURF1Q15526 300 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 SLC10A6Q3KNW5 377 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 SPRYD7Q5W111 196 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 MTHFD1LQ6UB35 978 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 MCRS1Q96EZ8 462 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 PDZD7Q9H5P4 517 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 SMYD2Q9NRG4 433 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 RAB6BQ9NRW1 208 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 FAM49BQ9NUQ9 324 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 ARL8BQ9NVJ2 186 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 CPA4Q9UI42 421 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 MFHAS1Q9Y4C4 1052 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 RBM47A0AV96 593 aaKnown RBP14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 MCF2LO15068 1137 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 IL4RP24394 825 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 RBL1P28749 1068 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 GRIA1P42261 906 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 ROR1Q01973 937 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 CCDC15Q0P6D6 951 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 GRB14Q14449 540 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 NAA25Q14CX7 972 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 CTC1Q2NKJ3 1217 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 RGS9BPQ6ZS82 235 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 PDIK1LQ8N165 341 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 LINC01465Q8N7H1 131 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 OR6J1Q8NGC5 347 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 LENG1Q96BZ8 264 aaPredicted RBP14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 TINF2Q9BSI4 451 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 LRMDAQ9H2I8 198 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 RRAGCQ9HB90 399 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 USP29Q9HBJ7 922 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 PIH1D1Q9NWS0 290 aaKnown RBP14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 SLC17A6Q9P2U8 582 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 SLC45A1Q9Y2W3 748 aa14.05□□□□□ -0.16
GTF2F1-201ENST00000394456 TRIP12Q14669 1992 aaPredicted RBP14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 KCNN4O15554 427 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 PEX11AO75192 247 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 MMP3P08254 477 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 GRIK4Q16099 956 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 PLEKHH3Q7Z736 793 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 C2orf69Q8N8R5 385 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 CCDC110Q8TBZ0 833 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 CLEC4CQ8WTT0 213 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 FAF2Q96CS3 445 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 FAM167BQ9BTA0 163 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 NGRNQ9NPE2 291 aaKnown RBP14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 TXLNGQ9NUQ3 528 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 ZFP69BQ9UJL9 534 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms