RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 NPNTQ6UXI9 565 aa13.33□□□□□ -0.28
ERCC2-204ENST00000391945 TMC3Q7Z5M5 1100 aa13.33□□□□□ -0.28
ERCC2-204ENST00000391945 UNC93AQ86WB7 457 aa13.33□□□□□ -0.28
ERCC2-204ENST00000391945 LRRC52Q8N7C0 313 aa13.33□□□□□ -0.28
ERCC2-204ENST00000391945 GABPB2Q8TAK5 448 aaPredicted RBP13.33□□□□□ -0.28
ERCC2-204ENST00000391945 PDCD6IPQ8WUM4 868 aaKnown RBP13.33□□□□□ -0.28
ERCC2-204ENST00000391945 PABPC5Q96DU9 382 aaKnown RBP13.33□□□□□ -0.28
ERCC2-204ENST00000391945 DDX27Q96GQ7 796 aaKnown RBP13.33□□□□□ -0.28
ERCC2-204ENST00000391945 DDX23Q9BUQ8 820 aaKnown RBP13.33□□□□□ -0.28
ERCC2-204ENST00000391945 DPEP3Q9H4B8 488 aa13.33□□□□□ -0.28
ERCC2-204ENST00000391945 TMBIM4Q9HC24 238 aa13.33□□□□□ -0.28
ERCC2-204ENST00000391945 PAK5Q9P286 719 aa13.33□□□□□ -0.28
ERCC2-204ENST00000391945 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.33□□□□□ -0.28
ERCC2-204ENST00000391945 UNCXA6NJT0 531 aa13.33□□□□□ -0.28
ERCC2-204ENST00000391945 RARGP13631 454 aa13.33□□□□□ -0.28
ERCC2-204ENST00000391945 KDELR1P24390 212 aa13.33□□□□□ -0.28
ERCC2-204ENST00000391945 CYP2F1P24903 491 aa13.33□□□□□ -0.28
ERCC2-204ENST00000391945 SERPINB6P35237 376 aa13.33□□□□□ -0.28
ERCC2-204ENST00000391945 HSPA9P38646 679 aaKnown RBP13.33□□□□□ -0.28
ERCC2-204ENST00000391945 STAT4Q14765 748 aa13.33□□□□□ -0.28
ERCC2-204ENST00000391945 TAF5Q15542 800 aa13.33□□□□□ -0.28
ERCC2-204ENST00000391945 PLEKHA7Q6IQ23 1121 aa13.33□□□□□ -0.28
ERCC2-204ENST00000391945 BBS5Q8N3I7 341 aa13.33□□□□□ -0.28
ERCC2-204ENST00000391945 SLITRK1Q96PX8 696 aa13.33□□□□□ -0.28
ERCC2-204ENST00000391945 MYO9BQ13459 2157 aa13.33□□□□□ -0.28
ERCC2-204ENST00000391945 TYW5A2RUC4 315 aaKnown RBP13.32□□□□□ -0.28
ERCC2-204ENST00000391945 PMM2O15305 246 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 F2P00734 622 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 ASPAP45381 313 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 RAB27AP51159 221 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 MAPRE1Q15691 268 aaKnown RBP13.32□□□□□ -0.28
ERCC2-204ENST00000391945 C10orf120Q5SQS8 335 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 SEPT8Q92599 483 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 KLHL29Q96CT2 875 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 GPR88Q9GZN0 384 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 MEFVO15553 781 aaPredicted RBP13.32□□□□□ -0.28
ERCC2-204ENST00000391945 LMO2P25791 158 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 STIP1P31948 543 aaKnown RBP13.32□□□□□ -0.28
ERCC2-204ENST00000391945 ZNF844Q08AG5 666 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 KLHL38Q2WGJ6 581 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 ZC3H12AQ5D1E8 599 aaKnown RBP13.32□□□□□ -0.28
ERCC2-204ENST00000391945 PPIL6Q8IXY8 311 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 BHMTQ93088 406 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.32□□□□□ -0.28
ERCC2-204ENST00000391945 STYXL1Q9Y6J8 313 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 CDK5RAP2Q96SN8 1893 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 TBKBP1A7MCY6 615 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 CYP1A1P04798 512 aaPredicted RBP13.32□□□□□ -0.28
ERCC2-204ENST00000391945 ALDH2P05091 517 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 RABGGTBP53611 331 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 COPS2P61201 443 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 PDK2Q15119 407 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 ERMARDQ5T6L9 678 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 PMF1Q6P1K2 205 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 KDM7AQ6ZMT4 941 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 ANKRD52Q8NB46 1076 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 MYCBPAPQ8TBZ2 947 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 XPO6Q96QU8 1125 aaKnown RBP13.32□□□□□ -0.28
ERCC2-204ENST00000391945 PITPNM3Q9BZ71 974 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 PIH1D1Q9NWS0 290 aaKnown RBP13.32□□□□□ -0.28
ERCC2-204ENST00000391945 WHRNQ9P202 907 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 EDN1P05305 212 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 GARSP41250 739 aaKnown RBP13.32□□□□□ -0.28
ERCC2-204ENST00000391945 SH3TC2Q8TF17 1288 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 DEFB118Q96PH6 123 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 SP110Q9HB58 689 aa13.32□□□□□ -0.28
ERCC2-204ENST00000391945 PABPN1LA6NDY0 278 aaKnown RBP13.31□□□□□ -0.28
ERCC2-204ENST00000391945 TCP11X1B4DZS4 312 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 NT5C1B-RDH14C9J2C7 533 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 NPR3P17342 541 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 DNAJB2P25686 324 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 ZNF143P52747 638 aaPredicted RBP13.31□□□□□ -0.28
ERCC2-204ENST00000391945 THOC5Q13769 683 aaKnown RBP13.31□□□□□ -0.28
ERCC2-204ENST00000391945 PDK1Q15118 436 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 PCBP1Q15365 356 aaKnown RBP eCLIP13.31□□□□□ -0.28
ERCC2-204ENST00000391945 FAM182AQ5T1J6 154 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 DENND5BQ6ZUT9 1274 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 COLEC11Q9BWP8 271 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 HAUS2Q9NVX0 235 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 KCNK1O00180 336 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 COPEO14579 308 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 PRRG1O14668 218 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 HCRTO43612 131 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 RPLP2P05387 115 aaKnown RBP13.31□□□□□ -0.28
ERCC2-204ENST00000391945 PECAM1P16284 738 aaPredicted RBP13.31□□□□□ -0.28
ERCC2-204ENST00000391945 CLCNKBP51801 687 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 CELF6Q96J87 481 aaKnown RBP13.31□□□□□ -0.28
ERCC2-204ENST00000391945 SNX27Q96L92 541 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 APOL2Q9BQE5 337 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 TRABDQ9H4I3 376 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 TRPC7Q9HCX4 862 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 SIX4Q9UIU6 781 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 KIAA0100Q14667 2235 aaKnown RBP13.31□□□□□ -0.28
ERCC2-204ENST00000391945 CFAP69A5D8W1 941 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 SOCS7O14512 581 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 IQCF3P0C7M6 154 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 LILRA4P59901 499 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 COG7P83436 770 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 SPARCL1Q14515 664 aa13.31□□□□□ -0.28
ERCC2-204ENST00000391945 SLC39A12Q504Y0 691 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms