RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 CCDC136Q96JN2 1154 aa4.37□□□□□ -1.71
SNORA40.3-201ENST00000390964 FAM227BQ96M60 508 aa4.37□□□□□ -1.71
SNORA40.3-201ENST00000390964 ASB2Q96Q27 587 aa4.37□□□□□ -1.71
SNORA40.3-201ENST00000390964 HIST1H2AAQ96QV6 131 aa4.37□□□□□ -1.71
SNORA40.3-201ENST00000390964 SELENOOQ9BVL4 669 aa4.37□□□□□ -1.71
SNORA40.3-201ENST00000390964 COLEC11Q9BWP8 271 aa4.37□□□□□ -1.71
SNORA40.3-201ENST00000390964 SNX15Q9NRS6 342 aa4.37□□□□□ -1.71
SNORA40.3-201ENST00000390964 TBC1D23Q9NUY8 699 aa4.37□□□□□ -1.71
SNORA40.3-201ENST00000390964 DNAJB11Q9UBS4 358 aa4.37□□□□□ -1.71
SNORA40.3-201ENST00000390964 STEAP1Q9UHE8 339 aa4.37□□□□□ -1.71
SNORA40.3-201ENST00000390964 VPS51Q9UID3 782 aa4.37□□□□□ -1.71
SNORA40.3-201ENST00000390964 TCRBV5S1A1TA0A578 114 aa4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 BTBD19C9JJ37 291 aa4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 UBE2Q2LH0YL09 131 aa4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 AGPSO00116 658 aa4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 ADAMTS3O15072 1205 aa4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 SPRY2O43597 315 aa4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 TUBB4AP04350 444 aa4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 CDK4P11802 303 aa4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 LMAN2Q12907 356 aa4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 IFIT5Q13325 482 aaKnown RBP4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 CLCA4Q14CN2 919 aa4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 ST3GAL2Q16842 350 aa4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 HSP90AB2PQ58FF8 381 aa4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 CATSPERGQ6ZRH7 1159 aa4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 USP49Q70CQ1 688 aa4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 BCDIN3DQ7Z5W3 292 aaKnown RBP4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 PNLDC1Q8NA58 520 aaKnown RBP4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 NGDNQ8NEJ9 315 aaKnown RBP4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 PJA1Q8NG27 643 aa4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 ADAMTS18Q8TE60 1221 aa4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 FYTTD1Q96QD9 318 aaKnown RBP4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 HEYLQ9NQ87 328 aaPredicted RBP4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 GAR1Q9NY12 217 aaKnown RBP4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 MGAT4CQ9UBM8 478 aa4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 RIMKLBQ9ULI2 386 aa4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 HPSEQ9Y251 543 aa4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 SETD1BQ9UPS6 1966 aaKnown RBP4.36□□□□□ -1.71
SNORA40.3-201ENST00000390964 POM121BA6NF01 834 aa4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 SNX2O60749 519 aa4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 USP1O94782 785 aa4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 MT-CO3P00414 261 aa4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 GNALP38405 381 aa4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 DIO1P49895 249 aa4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 KCNAB1Q14722 419 aa4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 CERKLQ49MI3 558 aaPredicted RBP4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 SERPINA13PQ6UXR4 307 aa4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 ZNF66Q6ZN08 573 aa4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 BEND5Q7L4P6 421 aa4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 CCAR1Q8IX12 1150 aaKnown RBP4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 LINC01465Q8N7H1 131 aa4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 RNF152Q8N8N0 203 aa4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 DDB2Q92466 427 aa4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 WDYHV1Q96HA8 205 aa4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 RITA1Q96K30 269 aa4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 MMS19Q96T76 1030 aa4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 ASIC5Q9NY37 505 aa4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 FAM50BQ9Y247 325 aa4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 COL15A1P39059 1388 aa4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 COL3A1P02461 1466 aaPredicted RBP4.35□□□□□ -1.71
SNORA40.3-201ENST00000390964 ANO9A1A5B4 782 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 H3BNC9 293 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 PPP6CO00743 305 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 APAF1O14727 1248 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 KPNA5O15131 536 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 PMM2O15305 246 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 KCNQ3O43525 872 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 CAND2O75155 1236 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 MYL4P12829 197 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 TSHRP16473 764 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 RBL1P28749 1068 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 ABCG1P45844 678 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 PRIM2P49643 509 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 ALDH5A1P51649 535 aaPredicted RBP4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 COPAP53621 1224 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 SSBP2P81877 361 aaPredicted RBP4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 EZH2Q15910 746 aaKnown RBP4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 SRSF7Q16629 238 aaKnown RBP eCLIP4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 FAM187BQ17R55 369 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 USP17L6PQ6QN14 398 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 NEK8Q86SG6 692 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 METTL25Q8N6Q8 603 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 C8orf58Q8NAV2 365 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 MBD3L2Q8NHZ7 208 aaPredicted RBP4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 VPS50Q96JG6 964 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 CCDC17Q96LX7 622 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 NAA15Q9BXJ9 866 aaKnown RBP4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 ZBTB26Q9HCK0 441 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 MYO1AQ9UBC5 1043 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 SLC27A6Q9Y2P4 619 aa4.34□□□□□ -1.71
SNORA40.3-201ENST00000390964 ZNF804BA4D1E1 1349 aa4.33□□□□□ -1.72
SNORA40.3-201ENST00000390964 A0A087WZ62 844 aa4.33□□□□□ -1.72
SNORA40.3-201ENST00000390964 A0A1W2PPC4 97 aa4.33□□□□□ -1.72
SNORA40.3-201ENST00000390964 DNAJC9-AS1A6NH13 148 aa4.33□□□□□ -1.72
SNORA40.3-201ENST00000390964 INO80B-WBP1J3KQ70 363 aa4.33□□□□□ -1.72
SNORA40.3-201ENST00000390964 CYP2D6P10635 497 aa4.33□□□□□ -1.72
SNORA40.3-201ENST00000390964 CYP2A6P11509 494 aaPredicted RBP4.33□□□□□ -1.72
SNORA40.3-201ENST00000390964 APEHP13798 732 aaKnown RBP4.33□□□□□ -1.72
SNORA40.3-201ENST00000390964 FGFR2P21802 821 aa4.33□□□□□ -1.72
SNORA40.3-201ENST00000390964 EPHB2P29323 1055 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms