RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 SPATA31A1Q5TZJ5 1347 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 RHPN2P1A8MT19 583 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 PSMD9O00233 223 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 PIAS2O75928 621 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 TUBB4AP04350 444 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 PARP1P09874 1014 aaKnown RBP2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 CD19P15391 556 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 TPH1P17752 444 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 CERS1P27544 350 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 MCM5P33992 734 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 PDE1AP54750 535 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 E2F1Q01094 437 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 MTAPQ13126 283 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 CCSAPQ6IQ19 270 aaPredicted RBP2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 ZNF782Q6ZMW2 699 aaPredicted RBP2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 ZNF66Q6ZN08 573 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 BCDIN3DQ7Z5W3 292 aaKnown RBP2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 DPP9Q86TI2 863 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 C8orf58Q8NAV2 365 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 FANCBQ8NB91 859 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 MBD3L2Q8NHZ7 208 aaPredicted RBP2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 SUN3Q8TAQ9 357 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 CYP2W1Q8TAV3 490 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 SMCR8Q8TEV9 937 aaPredicted RBP2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 DAZAP1Q96EP5 407 aaKnown RBP2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 RITA1Q96K30 269 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 WDR24Q96S15 920 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 ZBTB26Q9HCK0 441 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 PNPLA8Q9NP80 782 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 STARD7Q9NQZ5 370 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 DNAJB11Q9UBS4 358 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 NKX1-2Q9UD57 310 aaPredicted RBP2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 AMFRQ9UKV5 643 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 TBC1D30Q9Y2I9 924 aa2.79□□□□□ -1.96
RNU6-541P-201ENST00000384709 ZNF804BA4D1E1 1349 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 MANSC4A6NHS7 340 aaPredicted RBP2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 PRRT4C9JH25 899 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 AP4M1O00189 453 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 APAF1O14727 1248 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 THAP12O43422 761 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 TMPRSS11DO60235 418 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 PQBP1O60828 265 aaKnown RBP2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 VNN1O95497 513 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 MT-CO3P00414 261 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 MYL4P12829 197 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 APEHP13798 732 aaKnown RBP2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 FGFR2P21802 821 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 PRIM2P49643 509 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 RENBPP51606 427 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 ALDH5A1P51649 535 aaPredicted RBP2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 PGDP52209 483 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 SUMO2P61956 95 aaKnown RBP2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 CFHR3Q02985 330 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 LMAN2Q12907 356 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 DNASE1L3Q13609 305 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 ACOX1Q15067 660 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 ST3GAL2Q16842 350 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 COBLL1Q53SF7 1204 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 MEX3CQ5U5Q3 659 aaKnown RBP2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 PRAMEF17Q5VTA0 474 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 CACHD1Q5VU97 1274 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 DENND2CQ68D51 928 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 ZNF813Q6ZN06 617 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 RNF44Q7L0R7 432 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 NEK8Q86SG6 692 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 CHSY1Q86X52 802 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 PNPLA1Q8N8W4 532 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 ADAMTS18Q8TE60 1221 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 PNISRQ8TF01 805 aaKnown RBP2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 IQCDQ96DY2 449 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 P2RY11Q96G91 374 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 ASB2Q96Q27 587 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 MACROD1Q9BQ69 325 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 DPCDQ9BVM2 203 aaPredicted RBP2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 APOL5Q9BWW9 433 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 ARNT2Q9HBZ2 717 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 ZNF212Q9UDV6 495 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 STEAP1Q9UHE8 339 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 ITGB1BP2Q9UKP3 347 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 TNFRSF18Q9Y5U5 241 aa2.78□□□□□ -1.96
RNU6-541P-201ENST00000384709 CYP2D7A0A087X1C5 515 aa2.77□□□□□ -1.97
RNU6-541P-201ENST00000384709 RAB27BO00194 218 aa2.77□□□□□ -1.97
RNU6-541P-201ENST00000384709 EXOC5O00471 708 aa2.77□□□□□ -1.97
RNU6-541P-201ENST00000384709 PMM2O15305 246 aa2.77□□□□□ -1.97
RNU6-541P-201ENST00000384709 DHHO43323 396 aa2.77□□□□□ -1.97
RNU6-541P-201ENST00000384709 CAND2O75155 1236 aa2.77□□□□□ -1.97
RNU6-541P-201ENST00000384709 RASAL1O95294 804 aa2.77□□□□□ -1.97
RNU6-541P-201ENST00000384709 MBPP02686 304 aaPredicted RBP2.77□□□□□ -1.97
RNU6-541P-201ENST00000384709 ARP10275 920 aa2.77□□□□□ -1.97
RNU6-541P-201ENST00000384709 HGFP14210 728 aa2.77□□□□□ -1.97
RNU6-541P-201ENST00000384709 FPR3P25089 353 aa2.77□□□□□ -1.97
RNU6-541P-201ENST00000384709 GABRB3P28472 473 aa2.77□□□□□ -1.97
RNU6-541P-201ENST00000384709 DIO1P49895 249 aa2.77□□□□□ -1.97
RNU6-541P-201ENST00000384709 KCNJ12Q14500 433 aa2.77□□□□□ -1.97
RNU6-541P-201ENST00000384709 DAZAP2Q15038 168 aaPredicted RBP2.77□□□□□ -1.97
RNU6-541P-201ENST00000384709 SLC5A9Q2M3M2 681 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms