RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 PPP1R2P3Q6NXS1 205 aa19.74■□□□□ 0.75
SMN2-202ENST00000380742 PDZD4Q76G19 769 aaPredicted RBP19.74■□□□□ 0.75
SMN2-202ENST00000380742 SCD5Q86SK9 330 aa19.74■□□□□ 0.75
SMN2-202ENST00000380742 PHLDB2Q86SQ0 1253 aa19.74■□□□□ 0.75
SMN2-202ENST00000380742 LEMD2Q8NC56 503 aa19.74■□□□□ 0.75
SMN2-202ENST00000380742 SHKBP1Q8TBC3 707 aa19.74■□□□□ 0.75
SMN2-202ENST00000380742 NMUR1Q9HB89 426 aa19.74■□□□□ 0.75
SMN2-202ENST00000380742 WDR6Q9NNW5 1121 aaKnown RBP19.74■□□□□ 0.75
SMN2-202ENST00000380742 EPN1Q9Y6I3 576 aaPredicted RBP19.74■□□□□ 0.75
SMN2-202ENST00000380742 A0A1W2PRU2 124 aa19.73■□□□□ 0.75
SMN2-202ENST00000380742 GRXCR2A6NFK2 248 aa19.73■□□□□ 0.75
SMN2-202ENST00000380742 TAF5Q15542 800 aa19.73■□□□□ 0.75
SMN2-202ENST00000380742 OLFML1Q6UWY5 402 aa19.73■□□□□ 0.75
SMN2-202ENST00000380742 HFE2Q6ZVN8 426 aa19.73■□□□□ 0.75
SMN2-202ENST00000380742 MON1AQ86VX9 555 aa19.73■□□□□ 0.75
SMN2-202ENST00000380742 PDZD8Q8NEN9 1154 aa19.73■□□□□ 0.75
SMN2-202ENST00000380742 OVCA2Q8WZ82 227 aa19.73■□□□□ 0.75
SMN2-202ENST00000380742 IRGQQ8WZA9 623 aa19.73■□□□□ 0.75
SMN2-202ENST00000380742 SUSD6Q92537 303 aa19.73■□□□□ 0.75
SMN2-202ENST00000380742 VCPIP1Q96JH7 1222 aa19.73■□□□□ 0.75
SMN2-202ENST00000380742 PRDM6Q9NQX0 595 aa19.73■□□□□ 0.75
SMN2-202ENST00000380742 OSER1Q9NX31 292 aa19.73■□□□□ 0.75
SMN2-202ENST00000380742 TRPM5Q9NZQ8 1165 aa19.73■□□□□ 0.75
SMN2-202ENST00000380742 COG5Q9UP83 839 aa19.73■□□□□ 0.75
SMN2-202ENST00000380742 DOCK8Q8NF50 2099 aa19.73■□□□□ 0.75
SMN2-202ENST00000380742 HELZP42694 1942 aaKnown RBP19.73■□□□□ 0.75
SMN2-202ENST00000380742 A0A1W2PQH9 124 aa19.72■□□□□ 0.75
SMN2-202ENST00000380742 ZNF840PA6NDX5 716 aa19.72■□□□□ 0.75
SMN2-202ENST00000380742 NDUFA10O95299 355 aa19.72■□□□□ 0.75
SMN2-202ENST00000380742 LCA5LO95447 670 aa19.72■□□□□ 0.75
SMN2-202ENST00000380742 FGF19O95750 216 aa19.72■□□□□ 0.75
SMN2-202ENST00000380742 CALB1P05937 261 aa19.72■□□□□ 0.75
SMN2-202ENST00000380742 PTMAP06454 111 aaKnown RBP19.72■□□□□ 0.75
SMN2-202ENST00000380742 CDC25CP30307 473 aa19.72■□□□□ 0.75
SMN2-202ENST00000380742 CYLC1P35663 651 aaPredicted RBP19.72■□□□□ 0.75
SMN2-202ENST00000380742 MTHFRP42898 656 aa19.72■□□□□ 0.75
SMN2-202ENST00000380742 CCZ1BP86790 482 aa19.72■□□□□ 0.75
SMN2-202ENST00000380742 CCZ1P86791 482 aaPredicted RBP19.72■□□□□ 0.75
SMN2-202ENST00000380742 CYP4F8P98187 520 aa19.72■□□□□ 0.75
SMN2-202ENST00000380742 SLC6A3Q01959 620 aa19.72■□□□□ 0.75
SMN2-202ENST00000380742 ZNF268Q14587 947 aaPredicted RBP19.72■□□□□ 0.75
SMN2-202ENST00000380742 SNX30Q5VWJ9 437 aa19.72■□□□□ 0.75
SMN2-202ENST00000380742 ZDHHC17Q8IUH5 632 aa19.72■□□□□ 0.75
SMN2-202ENST00000380742 ITFG1Q8TB96 612 aa19.72■□□□□ 0.75
SMN2-202ENST00000380742 KHSRPQ92945 711 aaKnown RBP eCLIP19.72■□□□□ 0.75
SMN2-202ENST00000380742 MCRS1Q96EZ8 462 aa19.72■□□□□ 0.75
SMN2-202ENST00000380742 RIPOR3Q96MK2 946 aa19.72■□□□□ 0.75
SMN2-202ENST00000380742 ATXN3LQ9H3M9 355 aa19.72■□□□□ 0.75
SMN2-202ENST00000380742 TLR8Q9NR97 1041 aaKnown RBP19.72■□□□□ 0.75
SMN2-202ENST00000380742 USP15Q9Y4E8 981 aaPredicted RBP19.72■□□□□ 0.75
SMN2-202ENST00000380742 CLUHO75153 1309 aa19.72■□□□□ 0.75
SMN2-202ENST00000380742 NUP210Q8TEM1 1887 aaPredicted RBP19.72■□□□□ 0.75
SMN2-202ENST00000380742 EIF3CLB5ME19 914 aaKnown RBP19.71■□□□□ 0.75
SMN2-202ENST00000380742 GOLGA8SH3BPF8 625 aa19.71■□□□□ 0.75
SMN2-202ENST00000380742 ZNF197O14709 1029 aa19.71■□□□□ 0.75
SMN2-202ENST00000380742 MBTPS2O43462 519 aa19.71■□□□□ 0.75
SMN2-202ENST00000380742 ABL1P00519 1130 aa19.71■□□□□ 0.75
SMN2-202ENST00000380742 RRM1P23921 792 aa19.71■□□□□ 0.75
SMN2-202ENST00000380742 FSHRP23945 695 aa19.71■□□□□ 0.75
SMN2-202ENST00000380742 PPP3CCP48454 512 aa19.71■□□□□ 0.75
SMN2-202ENST00000380742 GALCP54803 685 aa19.71■□□□□ 0.75
SMN2-202ENST00000380742 GSCP56915 257 aaPredicted RBP19.71■□□□□ 0.75
SMN2-202ENST00000380742 YWHAGP61981 247 aaKnown RBP eCLIP19.71■□□□□ 0.75
SMN2-202ENST00000380742 TEAD2Q15562 447 aa19.71■□□□□ 0.75
SMN2-202ENST00000380742 POTEHQ6S545 545 aa19.71■□□□□ 0.75
SMN2-202ENST00000380742 CCDC112Q8NEF3 446 aa19.71■□□□□ 0.75
SMN2-202ENST00000380742 EIF3CQ99613 913 aaKnown RBP19.71■□□□□ 0.75
SMN2-202ENST00000380742 PACSIN1Q9BY11 444 aa19.71■□□□□ 0.75
SMN2-202ENST00000380742 POMKQ9H5K3 350 aa19.71■□□□□ 0.75
SMN2-202ENST00000380742 STRIP2Q9ULQ0 834 aa19.71■□□□□ 0.75
SMN2-202ENST00000380742 MRPS23Q9Y3D9 190 aaKnown RBP19.71■□□□□ 0.75
SMN2-202ENST00000380742 TCRBV5S1A1TA0A578 114 aa19.7■□□□□ 0.74
SMN2-202ENST00000380742 SART1O43290 800 aaKnown RBP19.7■□□□□ 0.74
SMN2-202ENST00000380742 ATMINO43313 823 aaPredicted RBP19.7■□□□□ 0.74
SMN2-202ENST00000380742 LTFP02788 710 aa19.7■□□□□ 0.74
SMN2-202ENST00000380742 FYNP06241 537 aa19.7■□□□□ 0.74
SMN2-202ENST00000380742 CEBPBP17676 345 aa19.7■□□□□ 0.74
SMN2-202ENST00000380742 ABCB4P21439 1286 aa19.7■□□□□ 0.74
SMN2-202ENST00000380742 SMAD4Q13485 552 aaKnown RBP19.7■□□□□ 0.74
SMN2-202ENST00000380742 LEXMQ3ZCV2 418 aa19.7■□□□□ 0.74
SMN2-202ENST00000380742 EFHC1Q5JVL4 640 aa19.7■□□□□ 0.74
SMN2-202ENST00000380742 STXBP5Q5T5C0 1151 aa19.7■□□□□ 0.74
SMN2-202ENST00000380742 FAM102AQ5T9C2 384 aaPredicted RBP19.7■□□□□ 0.74
SMN2-202ENST00000380742 BSPRYQ5W0U4 402 aa19.7■□□□□ 0.74
SMN2-202ENST00000380742 TOGARAM2Q6ZUX3 1019 aa19.7■□□□□ 0.74
SMN2-202ENST00000380742 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.7■□□□□ 0.74
SMN2-202ENST00000380742 ING5Q8WYH8 240 aa19.7■□□□□ 0.74
SMN2-202ENST00000380742 GCNAQ96QF7 691 aa19.7■□□□□ 0.74
SMN2-202ENST00000380742 THAP2Q9H0W7 228 aa19.7■□□□□ 0.74
SMN2-202ENST00000380742 WDR35Q9P2L0 1181 aa19.7■□□□□ 0.74
SMN2-202ENST00000380742 REXO2Q9Y3B8 237 aaKnown RBP19.7■□□□□ 0.74
SMN2-202ENST00000380742 ANKRD62A6NC57 917 aa19.7■□□□□ 0.74
SMN2-202ENST00000380742 C2orf78A6NCI8 922 aa19.7■□□□□ 0.74
SMN2-202ENST00000380742 GRAP2O75791 330 aa19.7■□□□□ 0.74
SMN2-202ENST00000380742 GJB6O95452 261 aa19.7■□□□□ 0.74
SMN2-202ENST00000380742 SCNN1AP37088 669 aa19.7■□□□□ 0.74
SMN2-202ENST00000380742 PSEN1P49768 467 aa19.7■□□□□ 0.74
SMN2-202ENST00000380742 TFF2Q03403 129 aa19.7■□□□□ 0.74
SMN2-202ENST00000380742 CBX2Q14781 532 aaPredicted RBP19.7■□□□□ 0.74
SMN2-202ENST00000380742 TXNDC8Q6A555 127 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms