RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 DSG1Q02413 1049 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 TMEM132BQ14DG7 1078 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 PDK4Q16654 411 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 ST13P4Q8IZP2 240 aaPredicted RBP12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 FBXO27Q8NI29 283 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 SLCO2A1Q92959 643 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 FAF2Q96CS3 445 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 SERAC1Q96JX3 654 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 NR1H4Q96RI1 486 aaPredicted RBP12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 IL1RAPL1Q9NZN1 696 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 SLC17A6Q9P2U8 582 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 PPARGC1AQ9UBK2 798 aaKnown RBP12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 LGALS13Q9UHV8 139 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 CYTH4Q9UIA0 394 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 RABGEF1Q9UJ41 708 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 GMEB1Q9Y692 573 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 TRAFD1O14545 582 aaPredicted RBP12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 CCDC22O60826 627 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 HAUS5O94927 633 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 ESRRAP11474 423 aaPredicted RBP12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 PTP4A2Q12974 167 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 GSTA3Q16772 222 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 CTC1Q2NKJ3 1217 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 EML3Q32P44 896 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 MROH9Q5TGP6 573 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 CASC4Q6P4E1 433 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 CEP70Q8NHQ1 597 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 AGR3Q8TD06 166 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 PIWIL1Q96J94 861 aaKnown RBP12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 FAM161BQ96MY7 647 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 CPXM1Q96SM3 734 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 DEFB129Q9H1M3 183 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 ST6GALNAC4Q9H4F1 302 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 TLE6Q9H808 572 aa12.96□□□□□ -0.33
PRPF40B-202ENST00000380281 TRIM49D1C9J1S8 452 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 H3BRJ5 948 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 LYPLA2O95372 231 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 CCDC166P0CW27 439 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 RXRBP28702 533 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 ADARP55265 1226 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 LMNB2Q03252 620 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 CAPSQ13938 189 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 R3HDM1Q15032 1099 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 LY6KQ17RY6 165 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 XKR3Q5GH77 459 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 FAM102AQ5T9C2 384 aaPredicted RBP12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 ARID3BQ8IVW6 561 aaPredicted RBP12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 DENND1AQ8TEH3 1009 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 ATXN7L3BQ96GX2 97 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 ECSITQ9BQ95 431 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 TMEM120AQ9BXJ8 343 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 TRIM55Q9BYV6 548 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 STK32BQ9NY57 414 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 MRPL42Q9Y6G3 142 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 E5RJQ4 531 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 LRCH4O75427 683 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 NPM3O75607 178 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 CXCL8P10145 99 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 ALDH18A1P54886 795 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 SH2D4BQ5SQS7 431 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 OR6B2Q6IFH4 312 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 CDHR3Q6ZTQ4 885 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 SCUBE1Q8IWY4 988 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 ARFGAP1Q8N6T3 406 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 ATP11CQ8NB49 1132 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 STKLD1Q8NE28 680 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 HEXIM2Q96MH2 286 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 WDR83Q9BRX9 315 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 PACSIN3Q9UKS6 424 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 MEI4A8MW99 385 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 ALOX15BO15296 676 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 PHKA2P46019 1235 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 TMPRSS15P98073 1019 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 EEF1DP3Q658K8 133 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 STYK1Q6J9G0 422 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 C15orf39Q6ZRI6 1047 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 ARMCX6Q7L4S7 300 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 UNC5BQ8IZJ1 945 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 TWNKQ96RR1 684 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 NTPCRQ9BSD7 190 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 MIS12Q9H081 205 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 ZNF212Q9UDV6 495 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 PAIP2BQ9ULR5 123 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 DOCK5Q9H7D0 1870 aa12.95□□□□□ -0.34
PRPF40B-202ENST00000380281 M0QYV0 167 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 KCNN4O15554 427 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 STBD1O95210 358 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 MIPP30301 263 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 CDC16Q13042 620 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 MORF4L2Q15014 288 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 TCEAL1Q15170 157 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 PHF13Q86YI8 300 aaPredicted RBP12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 HACE1Q8IYU2 909 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 ZBTB8BQ8NAP8 495 aaPredicted RBP12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 PPP1R14CQ8TAE6 165 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 SHKBP1Q8TBC3 707 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 USP6NLQ92738 828 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 CCDC124Q96CT7 223 aaKnown RBP12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 PPP1R36Q96LQ0 422 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms