RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 E2F8A0AVK6 867 aa18.88■□□□□ 0.61
PDLIM4-202ENST00000379018 KIAA0391O15091 583 aaKnown RBP18.88■□□□□ 0.61
PDLIM4-202ENST00000379018 ZBTB24O43167 697 aaPredicted RBP18.88■□□□□ 0.61
PDLIM4-202ENST00000379018 SERPINF2P08697 491 aa18.88■□□□□ 0.61
PDLIM4-202ENST00000379018 CYP2J2P51589 502 aa18.88■□□□□ 0.61
PDLIM4-202ENST00000379018 TRPC3Q13507 836 aa18.88■□□□□ 0.61
PDLIM4-202ENST00000379018 HECTD3Q5T447 861 aa18.88■□□□□ 0.61
PDLIM4-202ENST00000379018 EGFLAMQ63HQ2 1017 aa18.88■□□□□ 0.61
PDLIM4-202ENST00000379018 LRSAM1Q6UWE0 723 aa18.88■□□□□ 0.61
PDLIM4-202ENST00000379018 MIB1Q86YT6 1006 aa18.88■□□□□ 0.61
PDLIM4-202ENST00000379018 RGL4Q8IZJ4 473 aa18.88■□□□□ 0.61
PDLIM4-202ENST00000379018 B3GALNT2Q8NCR0 500 aa18.88■□□□□ 0.61
PDLIM4-202ENST00000379018 SCAMP5Q8TAC9 235 aa18.88■□□□□ 0.61
PDLIM4-202ENST00000379018 CEP76Q8TAP6 659 aa18.88■□□□□ 0.61
PDLIM4-202ENST00000379018 WBP2Q969T9 261 aa18.88■□□□□ 0.61
PDLIM4-202ENST00000379018 HSPA12BQ96MM6 686 aa18.88■□□□□ 0.61
PDLIM4-202ENST00000379018 CAMK1GQ96NX5 476 aa18.88■□□□□ 0.61
PDLIM4-202ENST00000379018 KCNK16Q96T55 309 aa18.88■□□□□ 0.61
PDLIM4-202ENST00000379018 GMIPQ9P107 970 aa18.88■□□□□ 0.61
PDLIM4-202ENST00000379018 MYH10P35580 1976 aa18.88■□□□□ 0.61
PDLIM4-202ENST00000379018 CLIC2O15247 247 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 TACC1O75410 805 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 RTN3O95197 1032 aaPredicted RBP18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 SNRNP35Q16560 246 aaKnown RBP18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 SPDYCQ5MJ68 293 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 GRAMD4Q6IC98 578 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 SLC36A4Q6YBV0 504 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 SCARA5Q6ZMJ2 495 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 TMEM25Q86YD3 366 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 ETFBKMTQ8IXQ9 262 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 WDFY3Q8IZQ1 3526 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 KIAA1958Q8N8K9 716 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 TRIML1Q8N9V2 468 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 TERB1Q8NA31 727 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 PDZD8Q8NEN9 1154 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 DMXL2Q8TDJ6 3036 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 ELMO3Q96BJ8 720 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 ZFRQ96KR1 1074 aaKnown RBP18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 PCDH15Q96QU1 1955 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 ACOX2Q99424 681 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 CGRRF1Q99675 332 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 SLC6A17Q9H1V8 727 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 CAPN10Q9HC96 672 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 CD93Q9NPY3 652 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 SPHK2Q9NRA0 654 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 DNAJC17Q9NVM6 304 aaKnown RBP18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 RAD54BQ9Y620 910 aa18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 FASNP49327 2511 aaKnown RBP18.87■□□□□ 0.61
PDLIM4-202ENST00000379018 DSPP15924 2871 aaKnown RBP18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 ATP8B3O60423 1300 aa18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 A0A0A0MRY4 1105 aa18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 IGHV1OR15-9A0A0B4J2B8 117 aa18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 NEDD8-MDP1E9PL57 170 aa18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 NDUFV2P19404 249 aa18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 NTSR1P30989 418 aa18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 HOXD12P35452 270 aa18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 SLC5A3P53794 718 aa18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 MYL6P60660 151 aa18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 PEAR1Q5VY43 1037 aaPredicted RBP18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 C19orf48Q6RUI8 117 aa18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 TPGS1Q6ZTW0 290 aa18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 NUDT18Q6ZVK8 323 aa18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 FAM35AQ86V20 835 aa18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 SLC41A1Q8IVJ1 513 aa18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 NELFCDQ8IXH7 590 aa18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 CHPFQ8IZ52 775 aa18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 OTUB2Q96DC9 234 aa18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 SMYD3Q9H7B4 428 aa18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 HCN2Q9UL51 889 aa18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 PCDHB9Q9Y5E1 797 aa18.86■□□□□ 0.61
PDLIM4-202ENST00000379018 ARHGAP33O14559 1287 aa18.85■□□□□ 0.61
PDLIM4-202ENST00000379018 HOXC11O43248 304 aaPredicted RBP18.85■□□□□ 0.61
PDLIM4-202ENST00000379018 PHACTR2O75167 634 aa18.85■□□□□ 0.61
PDLIM4-202ENST00000379018 NDUFS2O75306 463 aa18.85■□□□□ 0.61
PDLIM4-202ENST00000379018 HOXD13P35453 343 aa18.85■□□□□ 0.61
PDLIM4-202ENST00000379018 CDH8P55286 799 aa18.85■□□□□ 0.61
PDLIM4-202ENST00000379018 ASIC1P78348 528 aa18.85■□□□□ 0.61
PDLIM4-202ENST00000379018 CYP24A1Q07973 514 aa18.85■□□□□ 0.61
PDLIM4-202ENST00000379018 PLEKHG6Q3KR16 790 aa18.85■□□□□ 0.61
PDLIM4-202ENST00000379018 PREPLQ4J6C6 727 aaPredicted RBP18.85■□□□□ 0.61
PDLIM4-202ENST00000379018 SDE2Q6IQ49 451 aa18.85■□□□□ 0.61
PDLIM4-202ENST00000379018 KIAA1324Q6UXG2 1013 aaKnown RBP18.85■□□□□ 0.61
PDLIM4-202ENST00000379018 RABEPKQ7Z6M1 372 aa18.85■□□□□ 0.61
PDLIM4-202ENST00000379018 PNPLA1Q8N8W4 532 aa18.85■□□□□ 0.61
PDLIM4-202ENST00000379018 BHMTQ93088 406 aa18.85■□□□□ 0.61
PDLIM4-202ENST00000379018 KIAA1586Q9HCI6 787 aa18.85■□□□□ 0.61
PDLIM4-202ENST00000379018 KRT82Q9NSB4 513 aa18.85■□□□□ 0.61
PDLIM4-202ENST00000379018 A0A1W2PQF6 199 aa18.84■□□□□ 0.61
PDLIM4-202ENST00000379018 UPK3BL1B0FP48 263 aa18.84■□□□□ 0.61
PDLIM4-202ENST00000379018 UPK3BL2E5RIL1 263 aa18.84■□□□□ 0.61
PDLIM4-202ENST00000379018 H0Y626 953 aa18.84■□□□□ 0.61
PDLIM4-202ENST00000379018 TAF4O00268 1085 aa18.84■□□□□ 0.61
PDLIM4-202ENST00000379018 SH3BP5O60239 455 aa18.84■□□□□ 0.61
PDLIM4-202ENST00000379018 TRIM16O95361 564 aa18.84■□□□□ 0.61
PDLIM4-202ENST00000379018 SYPP08247 313 aa18.84■□□□□ 0.61
PDLIM4-202ENST00000379018 CD59P13987 128 aa18.84■□□□□ 0.61
PDLIM4-202ENST00000379018 MAOBP27338 520 aa18.84■□□□□ 0.61
PDLIM4-202ENST00000379018 ORC1Q13415 861 aa18.84■□□□□ 0.61
PDLIM4-202ENST00000379018 IPO4Q8TEX9 1081 aaKnown RBP18.84■□□□□ 0.61
PDLIM4-202ENST00000379018 SCFD1Q8WVM8 642 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms