RNA–Protein interactions for RNA: ENST00000378825.4

CCDC3-201, Transcript of coiled-coil domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC3, Length 2,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC3-201ENST00000378825 STK10O94804 968 aaKnown RBP19.21■□□□□ 0.67
CCDC3-201ENST00000378825 GMPRP36959 345 aa19.21■□□□□ 0.67
CCDC3-201ENST00000378825 TEX44Q53QW1 395 aa19.21■□□□□ 0.67
CCDC3-201ENST00000378825 SFT2D3Q587I9 215 aa19.21■□□□□ 0.67
CCDC3-201ENST00000378825 TRMT10BQ6PF06 316 aaKnown RBP19.21■□□□□ 0.67
CCDC3-201ENST00000378825 CCDC124Q96CT7 223 aaKnown RBP19.21■□□□□ 0.67
CCDC3-201ENST00000378825 CCDC106Q9BWC9 280 aa19.21■□□□□ 0.67
CCDC3-201ENST00000378825 IMPG2Q9BZV3 1241 aa19.21■□□□□ 0.67
CCDC3-201ENST00000378825 C17orf75Q9HAS0 396 aa19.21■□□□□ 0.67
CCDC3-201ENST00000378825 SLC17A6Q9P2U8 582 aa19.21■□□□□ 0.67
CCDC3-201ENST00000378825 SPECC1L-ADORA2AF8WAN1 911 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 RFPL1O75677 317 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 CSH1P0DML2 217 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 CSH2P0DML3 217 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 TBXAS1P24557 533 aaPredicted RBP19.2■□□□□ 0.66
CCDC3-201ENST00000378825 EMC2Q15006 297 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 MROH9Q5TGP6 573 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 DARS2Q6PI48 645 aaKnown RBP19.2■□□□□ 0.66
CCDC3-201ENST00000378825 C1orf228Q6PIY5 440 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 APLFQ8IW19 511 aaPredicted RBP19.2■□□□□ 0.66
CCDC3-201ENST00000378825 AZIN2Q96A70 460 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 ZBED3Q96IU2 234 aaPredicted RBP19.2■□□□□ 0.66
CCDC3-201ENST00000378825 PEBP4Q96S96 227 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 CPXM1Q96SM3 734 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 RAB6BQ9NRW1 208 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 KCNK4Q9NYG8 393 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 TAGLN3Q9UI15 199 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 A0A088AWK7 358 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 I3L4J1 428 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 K7ERI5 159 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 CD19P15391 556 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 EPHB1P54762 984 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 YWHAZP63104 245 aaKnown RBP19.2■□□□□ 0.66
CCDC3-201ENST00000378825 ATG14Q6ZNE5 492 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 NET1Q7Z628 596 aaPredicted RBP19.2■□□□□ 0.66
CCDC3-201ENST00000378825 MCPH1Q8NEM0 835 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 JDP2Q8WYK2 163 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 FAF2Q96CS3 445 aa19.2■□□□□ 0.66
CCDC3-201ENST00000378825 PPP1R1BQ9UD71 204 aaPredicted RBP19.2■□□□□ 0.66
CCDC3-201ENST00000378825 HMX2A2RU54 273 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 ASS1P00966 412 aaKnown RBP19.19■□□□□ 0.66
CCDC3-201ENST00000378825 KCNA2P16389 499 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 MIPP30301 263 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 KCNJ11Q14654 390 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 ZRSR2Q15696 482 aaKnown RBP19.19■□□□□ 0.66
CCDC3-201ENST00000378825 C16orf46Q6P387 395 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 DEFB132Q7Z7B7 95 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 NUDCD3Q8IVD9 361 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 MTMR14Q8NCE2 650 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 APOL6Q9BWW8 343 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 SPATA16Q9BXB7 569 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 PDP2Q9P2J9 529 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 POLIQ9UNA4 740 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 ARID2Q68CP9 1835 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 ARHGAP42A6NI28 874 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 A6NJR5 290 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 ITM2AO43736 263 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 CIB2O75838 187 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 OR6B1O95007 311 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 PYGLP06737 847 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 CPOXP36551 454 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 PSMC1P62191 440 aaKnown RBP19.19■□□□□ 0.66
CCDC3-201ENST00000378825 NBPF12Q5TAG4 269 aaPredicted RBP19.19■□□□□ 0.66
CCDC3-201ENST00000378825 DENND5BQ6ZUT9 1274 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 SLC26A11Q86WA9 606 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 UNC5BQ8IZJ1 945 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 ARHGAP24Q8N264 748 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 NIPA2Q8N8Q9 360 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 ZNF778Q96MU6 729 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 HBS1LQ9Y450 684 aaKnown RBP19.19■□□□□ 0.66
CCDC3-201ENST00000378825 STYXL1Q9Y6J8 313 aa19.19■□□□□ 0.66
CCDC3-201ENST00000378825 F8W8V4 182 aa19.18■□□□□ 0.66
CCDC3-201ENST00000378825 MCF2LO15068 1137 aa19.18■□□□□ 0.66
CCDC3-201ENST00000378825 NR3C2P08235 984 aa19.18■□□□□ 0.66
CCDC3-201ENST00000378825 STIP1P31948 543 aaKnown RBP19.18■□□□□ 0.66
CCDC3-201ENST00000378825 CDH8P55286 799 aa19.18■□□□□ 0.66
CCDC3-201ENST00000378825 MAP3K10Q02779 954 aa19.18■□□□□ 0.66
CCDC3-201ENST00000378825 CUL3Q13618 768 aa19.18■□□□□ 0.66
CCDC3-201ENST00000378825 LPAR1Q92633 364 aa19.18■□□□□ 0.66
CCDC3-201ENST00000378825 ATP6V0A1Q93050 837 aa19.18■□□□□ 0.66
CCDC3-201ENST00000378825 ZNF668Q96K58 619 aaPredicted RBP19.18■□□□□ 0.66
CCDC3-201ENST00000378825 NXF1Q9UBU9 619 aaKnown RBP19.18■□□□□ 0.66
CCDC3-201ENST00000378825 ADAMTS6Q9UKP5 1117 aa19.18■□□□□ 0.66
CCDC3-201ENST00000378825 F5H423 210 aaPredicted RBP19.18■□□□□ 0.66
CCDC3-201ENST00000378825 CRABP2P29373 138 aa19.18■□□□□ 0.66
CCDC3-201ENST00000378825 ACTR2P61160 394 aa19.18■□□□□ 0.66
CCDC3-201ENST00000378825 AP2B1P63010 937 aa19.18■□□□□ 0.66
CCDC3-201ENST00000378825 MSLNQ13421 630 aaPredicted RBP19.18■□□□□ 0.66
CCDC3-201ENST00000378825 SLC5A9Q2M3M2 681 aa19.18■□□□□ 0.66
CCDC3-201ENST00000378825 TRMT5Q32P41 509 aaKnown RBP19.18■□□□□ 0.66
CCDC3-201ENST00000378825 TTC39BQ5VTQ0 682 aaPredicted RBP19.18■□□□□ 0.66
CCDC3-201ENST00000378825 CDR2LQ86X02 465 aaPredicted RBP19.18■□□□□ 0.66
CCDC3-201ENST00000378825 MPP5Q8N3R9 675 aa19.18■□□□□ 0.66
CCDC3-201ENST00000378825 CYP4F11Q9HBI6 524 aa19.18■□□□□ 0.66
CCDC3-201ENST00000378825 RNF146Q9NTX7 359 aa19.18■□□□□ 0.66
CCDC3-201ENST00000378825 RGPD3A6NKT7 1758 aaPredicted RBP19.18■□□□□ 0.66
CCDC3-201ENST00000378825 RGPD4Q7Z3J3 1758 aa19.18■□□□□ 0.66
CCDC3-201ENST00000378825 ERBB2P04626 1255 aa19.17■□□□□ 0.66
CCDC3-201ENST00000378825 AQP4P55087 323 aa19.17■□□□□ 0.66
CCDC3-201ENST00000378825 TGFB2P61812 414 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms