RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 PDZD7Q9H5P4 517 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 SAE1Q9UBE0 346 aaPredicted RBP14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 TMEM120BA0PK00 339 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 DPYSL4O14531 572 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 HSPA4LO95757 839 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 CCL14Q16627 93 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 RASSF3Q86WH2 238 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 ZDHHC17Q8IUH5 632 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 MSL3Q8N5Y2 521 aaKnown RBP14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 MDM1Q8TC05 714 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 FRMD8P1Q9BZ68 369 aaPredicted RBP14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 SIX2Q9NPC8 291 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 CCDC88AQ3V6T2 1871 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 SMIM28A0A1B0GU29 152 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 CCDC195A0A1B0GUA6 201 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 TCP11X1B4DZS4 312 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 PMPCBO75439 489 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 ZNF189O75820 626 aaPredicted RBP14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 HARS2P49590 506 aaKnown RBP14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 MAP3K10Q02779 954 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 MBTD1Q05BQ5 628 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 KATNAL2Q8IYT4 538 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 LRRC52Q8N7C0 313 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 CCNYL1Q8N7R7 359 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 CFAP61Q8NHU2 1237 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 EPS8L3Q8TE67 593 aaKnown RBP14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 ANGPTL3Q9Y5C1 460 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 TSPAN1O60635 241 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 SLC2A3P11169 496 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 MMP8P22894 467 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 JAM2P57087 298 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 RNF135Q8IUD6 432 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 PARP9Q8IXQ6 854 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 SMARCD1Q96GM5 515 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 RAB3IPQ96QF0 476 aaPredicted RBP14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 PRMT1Q99873 361 aaKnown RBP14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 SENP6Q9GZR1 1112 aaPredicted RBP14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 FZD8Q9H461 694 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 DMAP1Q9NPF5 467 aaPredicted RBP14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 USH1CQ9Y6N9 552 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 SH3BP5O60239 455 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 ASGR1P07306 291 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 AMPD1P23109 780 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 ETFBP38117 255 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 ELAVL2Q12926 359 aaKnown RBP14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 ARHGAP18Q8N392 663 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 PRELID2Q8N945 189 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 B3GALNT2Q8NCR0 500 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 SCG3Q8WXD2 468 aaKnown RBP14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 CAVIN3Q969G5 261 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 ZNF669Q96BR6 464 aaPredicted RBP14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 XAB2Q9HCS7 855 aaKnown RBP14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 PPARGC1AQ9UBK2 798 aaKnown RBP14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 TUBGCP4Q9UGJ1 667 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 AJAP1Q9UKB5 411 aaPredicted RBP14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 NUDT5Q9UKK9 219 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 IPPQ9Y573 584 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 LCA5LO95447 670 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 JCHAINP01591 159 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 NCF2P19878 526 aaPredicted RBP14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 CDC25CP30307 473 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 PTK7Q13308 1070 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 CRHR2Q13324 411 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 TSNAXIP1Q2TAA8 658 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 C4orf22Q6V702 233 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 DENND5BQ6ZUT9 1274 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 NDUFAF2Q8N183 169 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 CRYGNQ8WXF5 182 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 CAPNS2Q96L46 248 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 C10orf88Q9H8K7 445 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 LSM7Q9UK45 103 aaKnown RBP14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 COQ4Q9Y3A0 265 aa14.71□□□□□ -0.05
SHROOM1-203ENST00000378679 AKAP11Q9UKA4 1901 aa14.71□□□□□ -0.06
SHROOM1-203ENST00000378679 UBA6A0AVT1 1052 aaPredicted RBP14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 SPAG6O75602 509 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 RGS20O76081 388 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 BAG2O95816 211 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 USP17L7P0C7H9 530 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 DNAJB2P25686 324 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 RPL10AP62906 217 aaKnown RBP14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 ITGA7Q13683 1181 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 MORF4L2Q15014 288 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 ACAP1Q15027 740 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 LRRC6Q86X45 466 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 TMEM86AQ8N2M4 240 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 KIF2BQ8N4N8 673 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 STAMBPL1Q96FJ0 436 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 DDX50Q9BQ39 737 aaKnown RBP14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 EIF2AQ9BY44 585 aaKnown RBP14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 FRMD8Q9BZ67 464 aaPredicted RBP14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 PCDH9Q9HC56 1237 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 FAM47DPA6NHR8 397 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 CAND2O75155 1236 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 KITP10721 976 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 RAG1P15918 1043 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 NNMTP40261 264 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 HSFY1Q96LI6 401 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 XPO6Q96QU8 1125 aaKnown RBP14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 YME1L1Q96TA2 773 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 APOL2Q9BQE5 337 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms