RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 TRPM5Q9NZQ8 1165 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 GABRDO14764 452 aa14.57□□□□□ -0.08
PRPF18-202ENST00000378572 PMM2O15305 246 aa14.57□□□□□ -0.08
PRPF18-202ENST00000378572 HDCP19113 662 aa14.57□□□□□ -0.08
PRPF18-202ENST00000378572 LMO2P25791 158 aa14.57□□□□□ -0.08
PRPF18-202ENST00000378572 MAGEA11P43364 429 aa14.57□□□□□ -0.08
PRPF18-202ENST00000378572 VAMP7P51809 220 aa14.57□□□□□ -0.08
PRPF18-202ENST00000378572 CYP24A1Q07973 514 aa14.57□□□□□ -0.08
PRPF18-202ENST00000378572 TBX2Q13207 712 aaPredicted RBP14.57□□□□□ -0.08
PRPF18-202ENST00000378572 TRPC3Q13507 836 aa14.57□□□□□ -0.08
PRPF18-202ENST00000378572 TRIM14Q14142 442 aa14.57□□□□□ -0.08
PRPF18-202ENST00000378572 PPM1JQ5JR12 505 aa14.57□□□□□ -0.08
PRPF18-202ENST00000378572 DENND5BQ6ZUT9 1274 aa14.57□□□□□ -0.08
PRPF18-202ENST00000378572 DPH6Q7L8W6 267 aa14.57□□□□□ -0.08
PRPF18-202ENST00000378572 SPC24Q8NBT2 197 aa14.57□□□□□ -0.08
PRPF18-202ENST00000378572 PARD3BQ8TEW8 1205 aa14.57□□□□□ -0.08
PRPF18-202ENST00000378572 KBTBD7Q8WVZ9 684 aa14.57□□□□□ -0.08
PRPF18-202ENST00000378572 CRTAC1Q9NQ79 661 aa14.57□□□□□ -0.08
PRPF18-202ENST00000378572 EHD2Q9NZN4 543 aa14.57□□□□□ -0.08
PRPF18-202ENST00000378572 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.57□□□□□ -0.08
PRPF18-202ENST00000378572 SPTBN2O15020 2390 aa14.57□□□□□ -0.08
PRPF18-202ENST00000378572 SLC30A4O14863 429 aa14.56□□□□□ -0.08
PRPF18-202ENST00000378572 TRIM66O15016 1216 aa14.56□□□□□ -0.08
PRPF18-202ENST00000378572 P4HA2O15460 535 aa14.56□□□□□ -0.08
PRPF18-202ENST00000378572 GDF9O60383 454 aa14.56□□□□□ -0.08
PRPF18-202ENST00000378572 STX10O60499 249 aa14.56□□□□□ -0.08
PRPF18-202ENST00000378572 FOXD2O60548 495 aaPredicted RBP14.56□□□□□ -0.08
PRPF18-202ENST00000378572 PHACTR2O75167 634 aa14.56□□□□□ -0.08
PRPF18-202ENST00000378572 NFATC1O95644 943 aa14.56□□□□□ -0.08
PRPF18-202ENST00000378572 WARSP23381 471 aaKnown RBP14.56□□□□□ -0.08
PRPF18-202ENST00000378572 HOXA6P31267 233 aa14.56□□□□□ -0.08
PRPF18-202ENST00000378572 GSDMDP57764 484 aa14.56□□□□□ -0.08
PRPF18-202ENST00000378572 PSMD6Q15008 389 aa14.56□□□□□ -0.08
PRPF18-202ENST00000378572 FBXO43Q4G163 708 aa14.56□□□□□ -0.08
PRPF18-202ENST00000378572 DCAF17Q5H9S7 520 aaPredicted RBP14.56□□□□□ -0.08
PRPF18-202ENST00000378572 FIGNQ5HY92 759 aa14.56□□□□□ -0.08
PRPF18-202ENST00000378572 TCERG1LQ5VWI1 586 aa14.56□□□□□ -0.08
PRPF18-202ENST00000378572 VSTM1Q6UX27 236 aa14.56□□□□□ -0.08
PRPF18-202ENST00000378572 TRAPPC11Q7Z392 1133 aa14.56□□□□□ -0.08
PRPF18-202ENST00000378572 KBTBD6Q86V97 674 aa14.56□□□□□ -0.08
PRPF18-202ENST00000378572 ACDQ96AP0 544 aa14.56□□□□□ -0.08
PRPF18-202ENST00000378572 CGRRF1Q99675 332 aa14.56□□□□□ -0.08
PRPF18-202ENST00000378572 MRPL45Q9BRJ2 306 aaKnown RBP14.56□□□□□ -0.08
PRPF18-202ENST00000378572 FBRSL1Q9HCM7 1045 aaKnown RBP14.56□□□□□ -0.08
PRPF18-202ENST00000378572 SIK3Q9Y2K2 1263 aa14.56□□□□□ -0.08
PRPF18-202ENST00000378572 ATG2BQ96BY7 2078 aa14.56□□□□□ -0.08
PRPF18-202ENST00000378572 GTF2H1P32780 548 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 GNL1P36915 607 aaPredicted RBP14.55□□□□□ -0.08
PRPF18-202ENST00000378572 FMO5P49326 533 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 SEC13P55735 322 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 CLDN10P78369 228 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 SF3A2Q15428 464 aaKnown RBP14.55□□□□□ -0.08
PRPF18-202ENST00000378572 SYCP1Q15431 976 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 EML3Q32P44 896 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 HS1BP3Q53T59 392 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 FAM171BQ6P995 826 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 TTC30AQ86WT1 665 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 PCED1BQ96HM7 432 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 NUP58Q9BVL2 599 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 SMPD4Q9NXE4 827 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 NXF1Q9UBU9 619 aaKnown RBP14.55□□□□□ -0.08
PRPF18-202ENST00000378572 F8VP50 259 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 SCAMP3O14828 347 aaKnown RBP14.55□□□□□ -0.08
PRPF18-202ENST00000378572 APBB3O95704 486 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 PTMAP06454 111 aaKnown RBP14.55□□□□□ -0.08
PRPF18-202ENST00000378572 GBP1P32455 592 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 BIRC3Q13489 604 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 DMC1Q14565 340 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 WDR72Q3MJ13 1102 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 C1orf220Q5T0J3 134 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 MYCBPAPQ8TBZ2 947 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 PLEKHO2Q8TD55 490 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 SPATA17Q96L03 361 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 CNTNAP3BQ96NU0 1288 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 CNTNAP3Q9BZ76 1288 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 GCNT4Q9P109 453 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 ARHGAP26Q9UNA1 814 aa14.55□□□□□ -0.08
PRPF18-202ENST00000378572 HELZP42694 1942 aaKnown RBP14.54□□□□□ -0.08
PRPF18-202ENST00000378572 A8MXQ7 604 aa14.54□□□□□ -0.08
PRPF18-202ENST00000378572 LEFTY2O00292 366 aa14.54□□□□□ -0.08
PRPF18-202ENST00000378572 EPN2O95208 641 aa14.54□□□□□ -0.08
PRPF18-202ENST00000378572 USP46P62068 366 aa14.54□□□□□ -0.08
PRPF18-202ENST00000378572 KCNMA1Q12791 1236 aa14.54□□□□□ -0.08
PRPF18-202ENST00000378572 ELF2Q15723 593 aa14.54□□□□□ -0.08
PRPF18-202ENST00000378572 TDRD10Q5VZ19 366 aaKnown RBP14.54□□□□□ -0.08
PRPF18-202ENST00000378572 CCDC186Q7Z3E2 898 aa14.54□□□□□ -0.08
PRPF18-202ENST00000378572 CAMKK1Q8N5S9 505 aa14.54□□□□□ -0.08
PRPF18-202ENST00000378572 CCDC150Q8NCX0 1101 aa14.54□□□□□ -0.08
PRPF18-202ENST00000378572 TSTD1Q8NFU3 115 aa14.54□□□□□ -0.08
PRPF18-202ENST00000378572 MED10Q9BTT4 135 aa14.54□□□□□ -0.08
PRPF18-202ENST00000378572 SMOC1Q9H4F8 434 aa14.54□□□□□ -0.08
PRPF18-202ENST00000378572 CCDC163A0A0D9SF12 145 aa14.53□□□□□ -0.08
PRPF18-202ENST00000378572 LRRIQ3A6PVS8 624 aaPredicted RBP14.53□□□□□ -0.08
PRPF18-202ENST00000378572 TRIM49P0CI25 452 aa14.53□□□□□ -0.08
PRPF18-202ENST00000378572 TRIM49CP0CI26 452 aa14.53□□□□□ -0.08
PRPF18-202ENST00000378572 DGKEP52429 567 aa14.53□□□□□ -0.08
PRPF18-202ENST00000378572 DLG4P78352 724 aa14.53□□□□□ -0.08
PRPF18-202ENST00000378572 EXOC3L4Q17RC7 722 aa14.53□□□□□ -0.08
PRPF18-202ENST00000378572 C2orf27AQ580R0 203 aa14.53□□□□□ -0.08
PRPF18-202ENST00000378572 SCARA5Q6ZMJ2 495 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms